>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
           (Fragment)
          Length = 1028

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 149 GVNIFVVRICSLVGDTMSYVPI*ECCCVCFDFLYMCN 39
           GV+I     C  +     YVP  ECC VC D +Y  N
Sbjct: 353 GVSICFTAQCGELNCERYYVPEGECCPVCEDPIYPLN 389

>RRN3_SCHPO (Q10110) RNA polymerase I specific transcription initiation factor|
           rrn3
          Length = 599

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +2

Query: 14  LERTNLLSSYTCTESR--SKHSNILKSVHKTWYRQRANKSLRQICLLLFIYNVLEERCS* 187
           L+  NLLS+ TC  SR  S +S+++ SV  + +  R    +R  C   F+ N++  + S 
Sbjct: 93  LQLQNLLSALTCNVSRLDSSNSSLVMSVLDSVWVSRDESFVR--CYTRFLGNLISAQ-SN 149

Query: 188 YLSVVLARL 214
           YL +V+  L
Sbjct: 150 YLPLVMTML 158

>CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
          Length = 1027

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 149 GVNIFVVRICSLVGDTMSYVPI*ECCCVCFDFLY 48
           GV++     C ++     YVP  ECC VC D +Y
Sbjct: 356 GVSVCFTAQCGVLHCERYYVPDGECCPVCEDPIY 389

>CRIM1_HUMAN (Q9NZV1) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
           (Cysteine-rich repeat-containing protein S52)
          Length = 1036

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -3

Query: 149 GVNIFVVRICSLVGDTMSYVPI*ECCCVCFDFLYMCN 39
           GV I     C  +     YVP  ECC VC D +Y  N
Sbjct: 362 GVAICFTAQCGEINCERYYVPEGECCPVCEDPVYPFN 398

>RIR1_AQUAE (O66503) Ribonucleoside-diphosphate reductase alpha subunit (EC|
           1.17.4.1) (Ribonucleotide reductase)
          Length = 801

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -3

Query: 188 IRSTFPPIHCK*KGVNIFVVRICSLVGDTMSYV 90
           IR+T  PI  K KG +  V+ +  L+ DTM+YV
Sbjct: 271 IRATGAPIR-KFKGASSGVIPVVKLINDTMTYV 302


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,642,328
Number of Sequences: 219361
Number of extensions: 458681
Number of successful extensions: 1229
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)