| Clone Name | rbaet52g11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SKP1B_ARATH (Q9FHW7) SKP1-like protein 1B (SKP1-like 2) (UFO-bin... | 33 | 0.15 | 2 | SKP1A_ARATH (Q39255) SKP1-like protein 1A (SKP1-like 1) (UFO-bin... | 33 | 0.15 | 3 | NOIL_ELAOL (Q8S3M3) NOI-like protein | 28 | 5.0 |
|---|
>SKP1B_ARATH (Q9FHW7) SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2)| Length = 171 Score = 33.5 bits (75), Expect = 0.15 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 218 EEEEIRRENQWAFE 177 EEEE+RRENQWAFE Sbjct: 158 EEEEVRRENQWAFE 171
>SKP1A_ARATH (Q39255) SKP1-like protein 1A (SKP1-like 1) (UFO-binding protein 1)| Length = 160 Score = 33.5 bits (75), Expect = 0.15 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 218 EEEEIRRENQWAFE 177 EEEE+RRENQWAFE Sbjct: 147 EEEEVRRENQWAFE 160
>NOIL_ELAOL (Q8S3M3) NOI-like protein| Length = 228 Score = 28.5 bits (62), Expect = 5.0 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 53 RLEDNYNPLRRHKEER*NADMTNTKSWSFSTAAAA 157 R DN+ P +H R N D+ KSW F+T A+ Sbjct: 130 RNSDNWLPQHQH-HRRTNKDLAEGKSWLFTTTTAS 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,318,456 Number of Sequences: 219361 Number of extensions: 393763 Number of successful extensions: 715 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 708 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 715 length of database: 80,573,946 effective HSP length: 48 effective length of database: 70,044,618 effective search space used: 1681070832 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)