ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet52d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (AC... 626 e-176
2gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltran... 309 3e-81
3ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predic... 230 2e-57
4emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 230 2e-57
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
6dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 2e-57
7ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predic... 180 2e-42
8ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.068
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.068
10gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 46 0.068
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.068
12emb|AJ831467.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
13emb|AJ831466.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
14emb|AJ831465.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
15emb|AJ831464.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
16emb|AJ831463.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
17emb|AJ831462.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
18emb|AJ831461.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
19emb|AJ831459.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
20emb|AJ831458.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
21emb|AJ831457.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
22emb|AJ831456.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
23emb|AJ831455.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
24emb|AJ831454.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
25emb|AJ831453.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
26emb|AJ831452.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
27emb|AJ831451.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
28emb|AJ831450.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
29emb|AJ831449.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
30emb|AJ831448.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
31emb|AJ831447.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
32emb|AJ831446.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
33emb|AJ831445.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
34emb|AJ831444.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
35emb|AJ831443.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
36emb|AJ831442.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
37emb|AJ831441.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
38emb|AJ831440.1| Arabidopsis thaliana partial tgg1 gene for thiog... 42 1.1
39emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in... 42 1.1
40emb|BX537251.10| Zebrafish DNA sequence from clone DKEY-249G23 i... 42 1.1
41emb|X79194.1|ATTGG1 A.thaliana TGG1 gene for myrosinase 42 1.1
42emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II B... 42 1.1
43dbj|AK089687.2| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.1
44emb|AL807780.7| Mouse DNA sequence from clone RP23-456P12 on chr... 42 1.1
45gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 42 1.1
46ref|XM_633465.1| Dictyostelium discoideum hypothetical protein (... 40 4.2
47gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequ... 40 4.2
48gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome... 40 4.2
49gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein... 40 4.2
50gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, comp... 40 4.2
51gb|U13072.1| Caenorhabditis elegans cosmid C07D10, complete sequ... 40 4.2
52ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, c... 40 4.2
53ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, c... 40 4.2
54ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA 40 4.2
55dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.2 
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
            cds
          Length = 1508

 Score =  626 bits (316), Expect = e-176
 Identities = 319/320 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaagaac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1471 aaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaagaac 1412

                                                                        
Query: 61   ttcaaaaatagaactaggcaagtggctaacgttgatccgacaccaggcacacattggcac 120
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 ttcaaaaataaaactaggcaagtggctaacgttgatccgacaccaggcacacattggcac 1352

                                                                        
Query: 121  atggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtgtt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 atggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtgtt 1292

                                                                        
Query: 181  catgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagacgg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 catgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagacgg 1232

                                                                        
Query: 241  cagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgccc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 cagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgccc 1172

                                
Query: 301  gccgccgaagtccatgtcgt 320
            ||||||||||||||||||||
Sbjct: 1171 gccgccgaagtccatgtcgt 1152
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>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA,
            partial cds
          Length = 1220

 Score =  309 bits (156), Expect = 3e-81
 Identities = 215/232 (92%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                        
Query: 89   acgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacgggacctag 148
            |||| |||||||||||| ||||||||| |||| |||||||||||| ||| ||| | ||||
Sbjct: 1116 acgtcgatccgacaccacgcacacatttgcacttggcaggtacgt-caagcgg-agctag 1059

                                                                        
Query: 149  tcgaggctgtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtag 208
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1058 tcgagggtgtagcagcagttcttgaaagtgttcatgtcgcggctaaagagtggcacgtag 999

                                                                        
Query: 209  gcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggc 268
            ||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 998  gcgcccacgctgccgtcgcccaagaaggacggtagcaggatgagcaggccctccaccggc 939

                                                                
Query: 269  aggtagctgggcatgaagaagaatggccgcccgccgccgaagtccatgtcgt 320
            ||||||||||||||||||||||| ||||| |||||||||| |||||||||||
Sbjct: 938  aggtagctgggcatgaagaagaagggccggccgccgccgaggtccatgtcgt 887



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 46   aattgaatcaagaacttcaaaaatagaactaggcaagt 83
            ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1188 aattgaatcaagaacttcaaaaatacaactaggcaagt 1151
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>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  230 bits (116), Expect = 2e-57
 Identities = 146/156 (93%)
 Strand = Plus / Minus

                                                                        
Query: 157  gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216
            |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 1257 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1198

                                                                        
Query: 217  gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276
            ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1197 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1138

                                                
Query: 277  gggcatgaagaagaatggccgcccgccgccgaagtc 312
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1137 gggcatgaagaagaatggccgcccgccgccgaagtc 1102
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>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score =  230 bits (116), Expect = 2e-57
 Identities = 146/156 (93%)
 Strand = Plus / Minus

                                                                         
Query: 157   gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216
             |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 11597 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 11538

                                                                         
Query: 217   gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276
             ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 11537 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 11478

                                                 
Query: 277   gggcatgaagaagaatggccgcccgccgccgaagtc 312
             ||||||||||||||||||||||||||||||||||||
Sbjct: 11477 gggcatgaagaagaatggccgcccgccgccgaagtc 11442



 Score =  180 bits (91), Expect = 2e-42
 Identities = 139/155 (89%)
 Strand = Plus / Plus

                                                                         
Query: 158   tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 217
             |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct: 13909 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 13968

                                                                         
Query: 218   ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 277
             |||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 13969 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 14028

                                                
Query: 278   ggcatgaagaagaatggccgcccgccgccgaagtc 312
             ||| |||| | ||||||| | |||| |||||||||
Sbjct: 14029 ggcgtgaacaggaatggctggccgctgccgaagtc 14063
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  230 bits (116), Expect = 2e-57
 Identities = 146/156 (93%)
 Strand = Plus / Minus

                                                                            
Query: 157      gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216
                |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 33960700 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 33960641

                                                                            
Query: 217      gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276
                ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 33960640 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 33960581

                                                    
Query: 277      gggcatgaagaagaatggccgcccgccgccgaagtc 312
                ||||||||||||||||||||||||||||||||||||
Sbjct: 33960580 gggcatgaagaagaatggccgcccgccgccgaagtc 33960545



 Score =  180 bits (91), Expect = 2e-42
 Identities = 139/155 (89%)
 Strand = Plus / Plus

                                                                            
Query: 158      tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 217
                |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct: 33963012 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 33963071

                                                                            
Query: 218      ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 277
                |||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 33963072 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 33963131

                                                   
Query: 278      ggcatgaagaagaatggccgcccgccgccgaagtc 312
                ||| |||| | ||||||| | |||| |||||||||
Sbjct: 33963132 ggcgtgaacaggaatggctggccgctgccgaagtc 33963166
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>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
            insert sequence
          Length = 1640

 Score =  230 bits (116), Expect = 2e-57
 Identities = 146/156 (93%)
 Strand = Plus / Minus

                                                                        
Query: 157  gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216
            |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 1411 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1352

                                                                        
Query: 217  gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276
            ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1351 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1292

                                                
Query: 277  gggcatgaagaagaatggccgcccgccgccgaagtc 312
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1291 gggcatgaagaagaatggccgcccgccgccgaagtc 1256
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>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score =  180 bits (91), Expect = 2e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                        
Query: 158  tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 217
            |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct: 1328 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 1269

                                                                        
Query: 218  ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 277
            |||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 1268 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 1209

                                               
Query: 278  ggcatgaagaagaatggccgcccgccgccgaagtc 312
            ||| |||| | ||||||| | |||| |||||||||
Sbjct: 1208 ggcgtgaacaggaatggctggccgctgccgaagtc 1174
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>ref|XM_469315.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 194  aagagtggcacgtaggcgtccacgctgccgtcgcc 228
            ||||||||||||||| |||| | ||||||||||||
Sbjct: 1340 aagagtggcacgtagacgtcgatgctgccgtcgcc 1306
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 194      aagagtggcacgtaggcgtccacgctgccgtcgcc 228
                ||||||||||||||| |||| | ||||||||||||
Sbjct: 26918691 aagagtggcacgtagacgtcgatgctgccgtcgcc 26918657
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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 194   aagagtggcacgtaggcgtccacgctgccgtcgcc 228
             ||||||||||||||| |||| | ||||||||||||
Sbjct: 97691 aagagtggcacgtagacgtcgatgctgccgtcgcc 97657
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 194      aagagtggcacgtaggcgtccacgctgccgtcgcc 228
                ||||||||||||||| |||| | ||||||||||||
Sbjct: 27010014 aagagtggcacgtagacgtcgatgctgccgtcgcc 27009980
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>emb|AJ831467.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype LL-0
          Length = 2478

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 717 tcgtttatttactcttccaaa 697
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>emb|AJ831466.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype LER-1
          Length = 2476

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 715 tcgtttatttactcttccaaa 695
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>emb|AJ831465.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype BA-1
          Length = 2419

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 639 tcgtttatttactcttccaaa 619
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>emb|AJ831464.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype WL-0
          Length = 2474

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 638 tcgtttatttactcttccaaa 618
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>emb|AJ831463.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype TSU-1
          Length = 2441

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 638 tcgtttatttactcttccaaa 618
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>emb|AJ831462.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype TAC
          Length = 2445

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 641 tcgtttatttactcttccaaa 621
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>emb|AJ831461.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype TA-0
          Length = 2450

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 643 tcgtttatttactcttccaaa 623
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>emb|AJ831459.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype SEI-0
          Length = 2442

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 638 tcgtttatttactcttccaaa 618
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>emb|AJ831458.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype RSCH-0
          Length = 2452

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 644 tcgtttatttactcttccaaa 624
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>emb|AJ831457.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype PI-0
          Length = 2444

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 638 tcgtttatttactcttccaaa 618
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>emb|AJ831456.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype PET-1
          Length = 2439

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 635 tcgtttatttactcttccaaa 615
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>emb|AJ831455.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype PER-1
          Length = 2445

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 642 tcgtttatttactcttccaaa 622
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>emb|AJ831454.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype NO-0
          Length = 2449

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 638 tcgtttatttactcttccaaa 618
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>emb|AJ831453.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype MT-0
          Length = 2444

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 639 tcgtttatttactcttccaaa 619
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>emb|AJ831452.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype MRK-0
          Length = 2440

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 636 tcgtttatttactcttccaaa 616
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>emb|AJ831451.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype MR-0
          Length = 2445

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 640 tcgtttatttactcttccaaa 620
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>emb|AJ831450.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype MH-0
          Length = 2452

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 640 tcgtttatttactcttccaaa 620
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>emb|AJ831449.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype LIP-0
          Length = 2440

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 639 tcgtttatttactcttccaaa 619
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>emb|AJ831448.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype HODJA
          Length = 2454

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 645 tcgtttatttactcttccaaa 625
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>emb|AJ831447.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype EI-2
          Length = 2450

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 644 tcgtttatttactcttccaaa 624
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>emb|AJ831446.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype DB-1
          Length = 2445

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 640 tcgtttatttactcttccaaa 620
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>emb|AJ831445.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype CVI-0
          Length = 2473

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 642 tcgtttatttactcttccaaa 622
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>emb|AJ831444.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype CAL-0
          Length = 2451

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 639 tcgtttatttactcttccaaa 619
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>emb|AJ831443.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype AG-0
          Length = 2443

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 640 tcgtttatttactcttccaaa 620
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>emb|AJ831442.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype KA-0
          Length = 2434

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 629 tcgtttatttactcttccaaa 609
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>emb|AJ831441.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype ABD-0
          Length = 2457

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 647 tcgtttatttactcttccaaa 627
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>emb|AJ831440.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside
           glucohydrolase, exons 1-12, ecotype COL-0
          Length = 2489

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  tcgtttatttactcttccaaa 34
           |||||||||||||||||||||
Sbjct: 724 tcgtttatttactcttccaaa 704
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>emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in linkage group 7,
              complete sequence
          Length = 180005

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     gtttatttactcttccaaaac 36
              |||||||||||||||||||||
Sbjct: 103054 gtttatttactcttccaaaac 103074
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>emb|BX537251.10| Zebrafish DNA sequence from clone DKEY-249G23 in linkage group 9,
             complete sequence
          Length = 169308

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    gtttatttactcttccaaaac 36
             |||||||||||||||||||||
Sbjct: 81226 gtttatttactcttccaaaac 81206
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>emb|X79194.1|ATTGG1 A.thaliana TGG1 gene for myrosinase
          Length = 5023

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 14   tcgtttatttactcttccaaa 34
            |||||||||||||||||||||
Sbjct: 2559 tcgtttatttactcttccaaa 2539
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>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10
          Length = 99967

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 81    agtggctaacgttgatccgacacca 105
             |||||||||||| ||||||||||||
Sbjct: 33123 agtggctaacgtcgatccgacacca 33147
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>dbj|AK089687.2| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830008L10 product:interleukin 13
           receptor, alpha 2, full insert sequence
          Length = 2206

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 25  ctcttccaaaacagaatggat 45
           |||||||||||||||||||||
Sbjct: 213 ctcttccaaaacagaatggat 193
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>emb|AL807780.7| Mouse DNA sequence from clone RP23-456P12 on chromosome X, complete
             sequence
          Length = 158108

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    ctcttccaaaacagaatggat 45
             |||||||||||||||||||||
Sbjct: 34748 ctcttccaaaacagaatggat 34768
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>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24
          Length = 127053

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    tcgtttatttactcttccaaa 34
             |||||||||||||||||||||
Sbjct: 64558 tcgtttatttactcttccaaa 64538
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>ref|XM_633465.1| Dictyostelium discoideum hypothetical protein (DDB0218618), partial
            mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tgaatcaagaacttcaaaaa 68
            ||||||||||||||||||||
Sbjct: 1145 tgaatcaagaacttcaaaaa 1164
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>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence
          Length = 37154

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  caagaaagacggcagcagga 248
            ||||||||||||||||||||
Sbjct: 2399 caagaaagacggcagcagga 2418
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>gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome 14, complete sequence
          Length = 162333

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ttaaaacttcgtttatttac 25
              ||||||||||||||||||||
Sbjct: 115760 ttaaaacttcgtttatttac 115741
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>gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein mRNA, complete
           cds
          Length = 2068

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 caagaaagacggcagcagga 248
           ||||||||||||||||||||
Sbjct: 372 caagaaagacggcagcagga 391
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>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence
          Length = 143534

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ttactcttccaaaacagaat 41
              ||||||||||||||||||||
Sbjct: 112095 ttactcttccaaaacagaat 112076
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>gb|U13072.1| Caenorhabditis elegans cosmid C07D10, complete sequence
          Length = 27935

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ttgaatcaagaacttcaaaa 67
             ||||||||||||||||||||
Sbjct: 19499 ttgaatcaagaacttcaaaa 19518
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>ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, complete cds
          Length = 1518

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 caagaaagacggcagcagga 248
           ||||||||||||||||||||
Sbjct: 637 caagaaagacggcagcagga 656
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>ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 caagaaagacggcagcagga 248
           ||||||||||||||||||||
Sbjct: 637 caagaaagacggcagcagga 656
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>ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA
          Length = 2068

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 caagaaagacggcagcagga 248
           ||||||||||||||||||||
Sbjct: 372 caagaaagacggcagcagga 391
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>dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655M14, complete
             sequences
          Length = 174074

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   aggcacacattggcacatgg 124
             ||||||||||||||||||||
Sbjct: 72264 aggcacacattggcacatgg 72245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,938,546
Number of Sequences: 3902068
Number of extensions: 2938546
Number of successful extensions: 62486
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62333
Number of HSP's gapped (non-prelim): 152
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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