| Clone Name | rbaet52b12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VE5_HPV33 (P06426) Probable protein E5 | 28 | 8.8 |
|---|
>VE5_HPV33 (P06426) Probable protein E5| Length = 75 Score = 27.7 bits (60), Expect = 8.8 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -3 Query: 175 WIGIGSPVSMSFC*YLMLYL 116 W+ +GSP+ + FC L LYL Sbjct: 40 WVFVGSPLKIFFCYLLFLYL 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,887,670 Number of Sequences: 219361 Number of extensions: 389094 Number of successful extensions: 662 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 656 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 662 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)