| Clone Name | rbaet52a04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 147 bits (74), Expect = 3e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 ||||||||| || ||||||||||||||||||||| ||||||| || || || ||||||| Sbjct: 2048 gtaggcctgattgtaggaggagtccatctcgtggacgacgagcctcgtgacgttgacccg 1989 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1988 ggcgctggtggcgttgttgaagaggtagaccccagcgttggcatagatggcctc 1935
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| |||||||||| | | ||||| || Sbjct: 1968 gtaggcttggttgtaggaggagtccatctcgtggacgacgaggctcttggcggtgacgcg 1909 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||| |||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 1908 ggcgttggtggcattgttgaagaggtacacccctgcgttggcgtagatggcctc 1855 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 atcatggcatcttccactag 68 |||||||||||||||||||| Sbjct: 2124 atcatggcatcttccactag 2105
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 241 ctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgcc 300 |||||| ||||||| ||||||||| ||| ||||||| ||||| | ||||||||||| || Sbjct: 2078 ctggttgtaggaggggtccatctcatggacgacgagactggtggcggtgacccgggcacc 2019 Query: 301 ggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||||||||||||||||||| ||||| || ||||| ||||||||||| |||| Sbjct: 2018 ggtggcgttgttgaagaggtataccccggcattggcgtagatggcctcagtcg 1966
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 89.7 bits (45), Expect = 6e-15 Identities = 99/117 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 ||||||||| || |||||| |||||||||| || | ||||||| || | ||||| || Sbjct: 2152 gtaggcctgattgtaggagaagtccatctcatgtactgcgaggctagtggcggtgacgcg 2093 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggt 351 ||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| Sbjct: 2092 ggcaccggtggcattgttgaagaggtacaccccggtgttggcgtagatggcctcggt 2036 Score = 44.1 bits (22), Expect = 0.31 Identities = 40/45 (88%), Gaps = 2/45 (4%) Strand = Plus / Minus Query: 24 tacatatacagctctagctttgcatatcatggcatcttccactag 68 ||||| |||||||||||| ||| | ||||||||||||||||||| Sbjct: 2326 tacatgtacagctctagccttg--tgtcatggcatcttccactag 2284 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gacaatgaatagacataataaa 117 |||||||||||||||||||||| Sbjct: 2260 gacaatgaatagacataataaa 2239
>gb|AY575557.1| Oryza sativa (indica cultivar-group) cultivar IR64 vacuolar invertase 2 mRNA, partial cds Length = 503 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 258 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 199 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| Sbjct: 198 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctc 145
>emb|AJ563384.1|ZMA563384 Zea mays partial ivr2 gene for vacuolar invertase, exons 1-2 Length = 1978 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 254 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 313 ||||||||||||||| ||||||| | || | |||||||| ||| |||||||||||||| Sbjct: 1661 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 1602 Query: 314 aagaggtacaccccagcgttggcatagatggcctcggt 351 |||||| | || || |||||||| |||||||||||||| Sbjct: 1601 aagaggaagacgccggcgttggcgtagatggcctcggt 1564
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 346510 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 346451 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| Sbjct: 346450 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctc 346397
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 3557 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 3498 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| Sbjct: 3497 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctc 3444
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 75294 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 75235 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| Sbjct: 75234 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctc 75181
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 2078 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 2019 Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| Sbjct: 2018 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctc 1965
>gb|AY107166.1| Zea mays PCO109921 mRNA sequence Length = 1901 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 254 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 313 ||||||||||||||| ||||||| | || | |||||||| ||| |||||||||||||| Sbjct: 1501 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 1442 Query: 314 aagaggtacaccccagcgttggcatagatggcctcggt 351 |||||| | || || |||||||| |||||||||||||| Sbjct: 1441 aagaggaagacgccggcgttggcgtagatggcctcggt 1404
>gb|U31451.1|ZMU31451 Zea mays invertase mRNA, partial cds Length = 1530 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 254 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 313 ||||||||||||||| ||||||| | || | |||||||| ||| |||||||||||||| Sbjct: 1487 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 1428 Query: 314 aagaggtacaccccagcgttggcatagatggcctcggt 351 |||||| | || || |||||||| |||||||||||||| Sbjct: 1427 aagaggaagacgccggcgttggcgtagatggcctcggt 1390
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 79.8 bits (40), Expect = 6e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 302 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1965 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcg 1914
>gb|AF069309.1| Triticum aestivum vacuolar invertase (WIVRV) mRNA, partial cds Length = 1840 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 296 gcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgaa 355 |||||||||||||||||||| |||||||| |||||| ||| ||||||||||| |||| | Sbjct: 1380 gcgccggtggcgttgttgaaaaggtacacgccagcggcggcgtagatggcctccgtcgga 1321 Query: 356 tacaccc 362 ||||||| Sbjct: 1320 tacaccc 1314
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 296 gcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgaa 355 |||||||||||||||||||| |||||||| |||||| ||| ||||||||||| |||| | Sbjct: 1929 gcgccggtggcgttgttgaaaaggtacacgccagcggcggcgtagatggcctccgtcgga 1870 Query: 356 tacaccc 362 ||||||| Sbjct: 1869 tacaccc 1863
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||||||||||||||||||| |||||||||||||| |||| ||||||||||| |||| Sbjct: 1871 ggcgccggtggcgttgttgaacaggtacaccccagccctggcgtagatggcctccgtcg 1813
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||||||||||||||||||| |||||||||||||| |||| ||||||||||| |||| Sbjct: 1865 ggcgccggtggcgttgttgaacaggtacaccccagccctggcgtagatggcctccgtcg 1807
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 75.8 bits (38), Expect = 9e-11 Identities = 89/106 (83%) Strand = Plus / Minus Query: 242 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 301 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || ||| || Sbjct: 1898 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcgcggcg 1839 Query: 302 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcct 347 |||||||||||||||||| |||| || |||||||| |||||||||| Sbjct: 1838 gtggcgttgttgaagaggaacacgccggcgttggcgtagatggcct 1793
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 75.8 bits (38), Expect = 9e-11 Identities = 89/106 (83%) Strand = Plus / Minus Query: 242 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 301 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || ||| || Sbjct: 1679 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcgcggcg 1620 Query: 302 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcct 347 |||||||||||||||||| |||| || |||||||| |||||||||| Sbjct: 1619 gtggcgttgttgaagaggaacacgccggcgttggcgtagatggcct 1574
>gb|AF083856.1|AF083856 Saccharum hybrid cultivar H65-7052 soluble acid invertase (scinvh3'2) mRNA, partial cds Length = 1402 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 242 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 301 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || || || Sbjct: 1006 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcacggcg 947 Query: 302 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcct 347 |||||||||||||||||| |||| || |||||||| |||||||||| Sbjct: 946 gtggcgttgttgaagaggaacacgccggcgttggcgtagatggcct 901
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 242 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 301 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || ||| || Sbjct: 1679 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcgcggcg 1620 Query: 302 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcct 347 |||||||||||||||||| |||| || |||||||| || ||||||| Sbjct: 1619 gtggcgttgttgaagaggaacacgccggcgttggcgtaaatggcct 1574
>gb|AY023475.1| Oryza sativa microsatellite MRG5800 containing (TCT)X8, closest to marker C1357, genomic sequence Length = 224 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 235 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 294 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 84 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 25 Query: 295 ggcgccggtggcgttgttgaagag 318 |||| |||||||||||||||||| Sbjct: 24 cgcgctggtggcgttgttgaagag 1
>gb|AY245431.1| Lolium perenne sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 1962 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 |||||| |||||||||||||||||||| ||||| ||| || ||||||||||| |||| Sbjct: 1884 ggcgcccgtggcgttgttgaagaggtagacccccgcggccgcgtagatggcctccgtcg 1826
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 295 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctc 348 |||||||||||| |||||||| ||||||||||| || | || ||||||||||| Sbjct: 1880 ggcgccggtggcattgttgaacaggtacacccctgccctagcgtagatggcctc 1827
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucrose-sucrose-1-fructosyltransferase (1-sst gene) Length = 2157 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Minus Query: 298 gccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||||||| |||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 1824 gccggtggcattgttgaacaggtagacccccgccgccgcatagatggcctcggtcg 1769
>gb|AC175059.2| Pan troglodytes BAC clone CH251-777D16 from chromosome y, complete sequence Length = 166448 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 148 gaggagaaaatcagaaaggaaatt 171 |||||||||||||||||||||||| Sbjct: 8919 gaggagaaaatcagaaaggaaatt 8896
>emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 in linkage group 8, complete sequence Length = 184723 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 93 cttgacaatgaatagacataataaaaa 119 |||||||||||||||||| |||||||| Sbjct: 117622 cttgacaatgaatagacagaataaaaa 117648
>gb|AC102734.11| Mus musculus chromosome 6, clone RP24-222N4, complete sequence Length = 238453 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 taaaaaagaaaagggaaacaaa 135 |||||||||||||||||||||| Sbjct: 173121 taaaaaagaaaagggaaacaaa 173142
>gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome 6, complete sequence Length = 197050 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 taaaaaagaaaagggaaacaaa 135 |||||||||||||||||||||| Sbjct: 184853 taaaaaagaaaagggaaacaaa 184832
>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence Length = 174491 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gaaattacacatatatgtatat 187 |||||||||||||||||||||| Sbjct: 96886 gaaattacacatatatgtatat 96907
>emb|AL360272.23| Human DNA sequence from clone RP11-169I2 on chromosome 6 Contains the 3' end of the SUPT3H gene for suppressor of Ty 3 homolog (S. cerevisiae), complete sequence Length = 110382 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 gagaaaatcagaaaggaaatta 172 |||||||||||||||||||||| Sbjct: 14363 gagaaaatcagaaaggaaatta 14384
>emb|AL133420.28| Human DNA sequence from clone RP5-904D7 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 84722 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 tacacatatatgtatatgctat 192 |||||||||||||||||||||| Sbjct: 15368 tacacatatatgtatatgctat 15347
>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence Length = 183519 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 ataataaaaaagaaaagggaaacaaa 135 |||||||||||||||| ||||||||| Sbjct: 121633 ataataaaaaagaaaaaggaaacaaa 121658
>gb|AC068991.28| Homo sapiens 12 BAC RP11-300D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173639 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 gagaaaatcagaaaggaaatta 172 |||||||||||||||||||||| Sbjct: 19697 gagaaaatcagaaaggaaatta 19718
>gb|AC091639.5| Homo sapiens chromosome 8, clone RP11-61K18, complete sequence Length = 147480 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 aattacacatatatgtatatgc 189 |||||||||||||||||||||| Sbjct: 47094 aattacacatatatgtatatgc 47115
>gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete sequence Length = 152843 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 aattacacatatatgtatatgc 189 |||||||||||||||||||||| Sbjct: 149559 aattacacatatatgtatatgc 149538
>dbj|BS000055.1| Pan troglodytes chromosome 22 clone:RP43-136G21, map 22, complete sequences Length = 145560 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 ataataaaaaagaaaagggaaacaaa 135 ||||||||||||||||| |||||||| Sbjct: 1983 ataataaaaaagaaaagagaaacaaa 2008
>dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06, map 22, complete sequences Length = 145481 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 ataataaaaaagaaaagggaaacaaa 135 ||||||||||||||||| |||||||| Sbjct: 67786 ataataaaaaagaaaagagaaacaaa 67811
>gb|AC007065.5|AC007065 Homo sapiens, clone hRPK.58_A_1, complete sequence Length = 169325 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 gagaaaatcagaaaggaaatta 172 |||||||||||||||||||||| Sbjct: 15429 gagaaaatcagaaaggaaatta 15450
>dbj|AP005361.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1538E2, complete sequence Length = 65355 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 aattacacatatatgtatatgc 189 |||||||||||||||||||||| Sbjct: 27123 aattacacatatatgtatatgc 27102
>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence Length = 168366 Score = 42.1 bits (21), Expect = 1.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 158 tcagaaaggaaattacacatatatgtata 186 ||||||||||||| ||||||||||||||| Sbjct: 108582 tcagaaaggaaat-acacatatatgtata 108609
>gb|AC104917.9| Mus musculus chromosome 1, clone RP23-329F7, complete sequence Length = 205999 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aaaagaaaagggaaacaaaga 137 ||||||||||||||||||||| Sbjct: 6911 aaaagaaaagggaaacaaaga 6891
>gb|AC133093.4| Mus musculus BAC clone RP23-442I18 from chromosome 8, complete sequence Length = 177876 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 ataaaaaagaaaagggaaacaaaga 137 ||||||||||||||||||| ||||| Sbjct: 142076 ataaaaaagaaaagggaaagaaaga 142052
>gb|AC124424.4| Mus musculus BAC clone RP24-230J3 from chromosome 2, complete sequence Length = 190802 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 atttgattgatgtagtacata 29 ||||||||||||||||||||| Sbjct: 62261 atttgattgatgtagtacata 62281
>emb|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2 Contains a novel pseudogene, a 60S Ribosomal protein L30 (RPL30) pseudogene, H4 histone family member F pseudogene H4FFP and histone genes H2BFC, H2AFC, H3FK. Contains ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 139904 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gacataataaaaaagaaaagg 127 ||||||||||||||||||||| Sbjct: 61551 gacataataaaaaagaaaagg 61531
>gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154482 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 99 aatgaatagacataataaaaaagaaaagggaaa 131 |||||||| | |||||||||||||||| ||||| Sbjct: 80163 aatgaataaatataataaaaaagaaaatggaaa 80195
>gb|AF492836.1| Lolium perenne putative sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 2508 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 305 gcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||||||||| ||||||||||| || ||| ||||||||||| |||| Sbjct: 1897 gcgttgttgaacaggtacacccctgccgcggcgtagatggcctccgtcg 1849
>gb|AC021105.13| Homo sapiens BAC clone RP11-163O17 from 4, complete sequence Length = 187360 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 aaaggaaattacacatatatg 182 ||||||||||||||||||||| Sbjct: 26981 aaaggaaattacacatatatg 27001
>gb|AC158399.2| Mus musculus BAC clone RP23-246A2 from chromosome 14, complete sequence Length = 198948 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 tacacatatatgtatatgcta 191 ||||||||||||||||||||| Sbjct: 52520 tacacatatatgtatatgcta 52500
>dbj|AK030792.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830402J09 product:hypothetical protein, full insert sequence Length = 4547 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 atttgattgatgtagtacata 29 ||||||||||||||||||||| Sbjct: 4007 atttgattgatgtagtacata 4027
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 295 ggcgccggtggcgttgttgaagaggtacacccc 327 |||||||||||| |||||||| ||||| ||||| Sbjct: 1941 ggcgccggtggcattgttgaacaggtagacccc 1909
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 295 ggcgccggtggcgttgttgaagaggtacacccc 327 ||||||||| ||||||||||| | ||||||||| Sbjct: 1824 ggcgccggttgcgttgttgaaaacgtacacccc 1792
>dbj|AB125218.1| Lolium perenne mRNA for putative fructosyltransferase2, complete cds Length = 2462 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 305 gcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 ||||||||||| ||||||||||| || ||| ||||||||||| |||| Sbjct: 1882 gcgttgttgaacaggtacacccctgccgcggcgtagatggcctccgtcg 1834
>emb|AJ277858.1|MTR277858 Medicago truncatula nod25 gene for nodulin 25, exons 1-13 Length = 10581 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 aaattacacatatatgtatat 187 ||||||||||||||||||||| Sbjct: 3963 aaattacacatatatgtatat 3983
>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 149839 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 99 aatgaatagacataataaaaaagaaaagggaaa 131 |||||||| | |||||||||||||||| ||||| Sbjct: 50966 aatgaataaatataataaaaaagaaaatggaaa 50934
>gb|AC126020.4| Mus musculus BAC clone RP24-364O7 from 8, complete sequence Length = 179287 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 atcagaaaggaaattacacatatat 181 |||||||||||||||| |||||||| Sbjct: 81322 atcagaaaggaaattaaacatatat 81298
>gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromosome unknown, complete sequence Length = 204711 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttgacaatgaatagacataat 114 ||||||||||||||||||||| Sbjct: 109228 ttgacaatgaatagacataat 109208
>gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, complete sequence Length = 218071 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 acacatatatgtatatgctat 192 ||||||||||||||||||||| Sbjct: 166156 acacatatatgtatatgctat 166176
>gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, complete sequence Length = 211648 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 acacatatatgtatatgctat 192 ||||||||||||||||||||| Sbjct: 161076 acacatatatgtatatgctat 161056
>emb|AL840623.10| Mouse DNA sequence from clone RP23-289L17 on chromosome 4, complete sequence Length = 112610 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 aaattacacatatatgtatat 187 ||||||||||||||||||||| Sbjct: 18204 aaattacacatatatgtatat 18224
>emb|AL844163.7| Mouse DNA sequence from clone RP23-467L21 on chromosome 2, complete sequence Length = 165671 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 atttgattgatgtagtacata 29 ||||||||||||||||||||| Sbjct: 159358 atttgattgatgtagtacata 159338
>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence Length = 182468 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 aataaaaaagaaaagggaaacaaa 135 ||||||||| |||||||||||||| Sbjct: 13212 aataaaaaaaaaaagggaaacaaa 13189
>ref|NM_003826.1| Homo sapiens N-ethylmaleimide-sensitive factor attachment protein, gamma (NAPG), mRNA Length = 1195 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 1027 aaaagaaaagggaaacaaag 1046
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aataaaaaagaaaagggaaa 131 |||||||||||||||||||| Sbjct: 81267 aataaaaaagaaaagggaaa 81286
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 acataataaaaaagaaaagggaaa 131 |||||| ||||||||||||||||| Sbjct: 1421875 acataaaaaaaaagaaaagggaaa 1421852
>gb|AC105378.10| Trypanosoma brucei chromosome 7 clone RPCI93-27E10, complete sequence Length = 138995 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 acataataaaaaagaaaagggaaa 131 |||||| ||||||||||||||||| Sbjct: 124060 acataaaaaaaaagaaaagggaaa 124037
>gb|BC001889.1| Homo sapiens N-ethylmaleimide-sensitive factor attachment protein, gamma, mRNA (cDNA clone MGC:1699 IMAGE:3536833), complete cds Length = 1162 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 1017 aaaagaaaagggaaacaaag 1036
>ref|XM_957317.1| Neurospora crassa OR74A hypothetical protein (NCU06376.1) partial mRNA Length = 1695 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gatggcctcggtcgaataca 359 |||||||||||||||||||| Sbjct: 405 gatggcctcggtcgaataca 424
>ref|XM_326230.1| Neurospora crassa OR74A hypothetical protein (NCU06376.1) partial mRNA Length = 1695 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gatggcctcggtcgaataca 359 |||||||||||||||||||| Sbjct: 405 gatggcctcggtcgaataca 424
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 agacataataaaaaagaaaa 125 |||||||||||||||||||| Sbjct: 8472 agacataataaaaaagaaaa 8491
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aataaaaaagaaaagggaaa 131 |||||||||||||||||||| Sbjct: 130499 aataaaaaagaaaagggaaa 130518
>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence Length = 159753 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 70001 aaaagaaaagggaaacaaag 69982
>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence Length = 207139 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 agacataataaaaaagaaaa 125 |||||||||||||||||||| Sbjct: 32941 agacataataaaaaagaaaa 32960
>emb|CT030313.1| Xenopus tropicalis finished cDNA, clone TEgg131e05 Length = 5104 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 atagacataataaaaaagaa 123 |||||||||||||||||||| Sbjct: 1815 atagacataataaaaaagaa 1834
>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete sequence Length = 217752 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 attacacatatatgtatatg 188 |||||||||||||||||||| Sbjct: 75763 attacacatatatgtatatg 75782
>emb|AL713986.10| Mouse DNA sequence from clone RP23-142G13 on chromosome X, complete sequence Length = 204903 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaagaaaagggaaacaaaga 137 |||||||||||||||||||| Sbjct: 113238 aaagaaaagggaaacaaaga 113257
>gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, complete sequence Length = 200294 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcctggttataggaggagtc 258 |||||||||||||||||||| Sbjct: 53135 gcctggttataggaggagtc 53116
>gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, complete sequence Length = 199869 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gcctggttataggaggagtc 258 |||||||||||||||||||| Sbjct: 9207 gcctggttataggaggagtc 9226
>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence Length = 196300 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaatcagaaaggaaattac 173 |||||||||||||||||||| Sbjct: 51377 aaaatcagaaaggaaattac 51358
>emb|AL606759.8| Human DNA sequence from clone CTD-2319N17 on chromosome X, complete sequence Length = 30082 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 attacacatatatgtatatg 188 |||||||||||||||||||| Sbjct: 652 attacacatatatgtatatg 633
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 gcgttggcatagatggcctcggtc 352 |||||||||| ||||||||||||| Sbjct: 1434599 gcgttggcattgatggcctcggtc 1434576
>emb|AL356739.11| Human DNA sequence from clone RP11-324P13 on chromosome 6, complete sequence Length = 98548 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 aaaggaaattacacatatat 181 |||||||||||||||||||| Sbjct: 72636 aaaggaaattacacatatat 72617
>gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's Hospital Oakland Research Institute) complete sequence Length = 247105 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 acatatatgtatatgctatc 193 |||||||||||||||||||| Sbjct: 112984 acatatatgtatatgctatc 113003
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 aaaaaagaaaagggaaacaaagat 138 ||||||||||||||||| |||||| Sbjct: 9261 aaaaaagaaaagggaaataaagat 9284
>emb|AL157944.24| Human DNA sequence from clone RP5-1126B2 on chromosome 1p31.1-31.2 Contains STSs and GSSs, complete sequence Length = 154746 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 ataataaaaaagaaaagggaaacaaaga 137 ||||||||| ||| |||||||||||||| Sbjct: 61282 ataataaaatagacaagggaaacaaaga 61255
>emb|AL138966.19| Human DNA sequence from clone RP11-380N8 on chromosome 13 Contains the RNF6 gene for ring finger protein (C3H2C3 type) 6, a protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)(inhibitor of protein kinase PKR) (PRKRIR) pseudogene, a TcD37 homolog (HTCD37) pseudogene, a pseudogene similar to part of ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1 (ATPase II aminophospholipid translocase) (ATP8A1)(ATPIA, ATPP2, ATPASEII) and 2 CpG islands, complete sequence Length = 171160 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aaaaaagaaaagggaaacaa 134 |||||||||||||||||||| Sbjct: 131726 aaaaaagaaaagggaaacaa 131745
>emb|AL132793.24|HSDJ324B8 Human DNA sequence from clone RP3-324B8 on chromosome 6q12-13, complete sequence Length = 120535 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaaagaaaagggaaacaaa 135 |||||||||||||||||||| Sbjct: 26860 aaaaagaaaagggaaacaaa 26879
>gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete sequence Length = 175380 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aagaaaagggaaacaaagat 138 |||||||||||||||||||| Sbjct: 16895 aagaaaagggaaacaaagat 16876
>gb|AF233390.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete sequence Length = 95005 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aagaaaagggaaacaaagat 138 |||||||||||||||||||| Sbjct: 1393 aagaaaagggaaacaaagat 1374
>emb|AL022148.1|HS435A7 Human DNA sequence from clone RP3-435A7 on chromosome Xq22.1-22.3, complete sequence Length = 98067 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 attacacatatatgtatatg 188 |||||||||||||||||||| Sbjct: 96719 attacacatatatgtatatg 96700
>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5 Length = 281723 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 aataaaaaagaaaagggaaacaaa 135 |||||||||||||||| ||||||| Sbjct: 178041 aataaaaaagaaaaggaaaacaaa 178064
>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5 Length = 330050 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 aaattacacatatatgtatatgct 190 |||||||| ||||||||||||||| Sbjct: 121170 aaattacatatatatgtatatgct 121147
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 110 ataataaaaaagaaaagggaaacaaaga 137 ||||||||||||||||| |||| ||||| Sbjct: 210643 ataataaaaaagaaaagcgaaataaaga 210670
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaaagaaaagggaaacaaa 135 |||||||||||||||||||| Sbjct: 4431 aaaaagaaaagggaaacaaa 4412
>emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 26 Length = 199754 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaaagaaaagggaaacaaa 135 |||||||||||||||||||| Sbjct: 199185 aaaaagaaaagggaaacaaa 199166
>emb|AL732397.5| Mouse DNA sequence from clone RP23-469O11 on chromosome 11 Contains the 5' UTR of a variant of a novel gene, complete sequence Length = 78894 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aataaaaaagaaaagggaaa 131 |||||||||||||||||||| Sbjct: 19566 aataaaaaagaaaagggaaa 19547
>gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosome 12, complete sequence Length = 200606 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gaaaatcagaaaggaaatta 172 |||||||||||||||||||| Sbjct: 177163 gaaaatcagaaaggaaatta 177144
>gb|AC117507.5| Homo sapiens 3 BAC RP11-137K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 134182 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 atagacataataaaaaagaa 123 |||||||||||||||||||| Sbjct: 121687 atagacataataaaaaagaa 121668
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 agacataataaaaaagaaaa 125 |||||||||||||||||||| Sbjct: 760609 agacataataaaaaagaaaa 760628
>dbj|AK126942.1| Homo sapiens cDNA FLJ44995 fis, clone BRAWH3010602, highly similar to Gamma-soluble NSF attachment protein Length = 3860 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 1334 aaaagaaaagggaaacaaag 1353
>emb|CR602036.1| full-length cDNA clone CS0DJ012YJ22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1321 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 755 aaaagaaaagggaaacaaag 774
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0015F09b, complete sequence Length = 108964 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttgattgatgtagtacata 29 |||||||||||||||||||| Sbjct: 18603 tttgattgatgtagtacata 18622
>gb|AC067981.6| Homo sapiens chromosome 18, clone RP11-805E19, complete sequence Length = 158750 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 taataaaaaagaaaagggaaacaa 134 ||||||| |||||||||||||||| Sbjct: 56361 taataaagaagaaaagggaaacaa 56338
>gb|AC113137.2| Homo sapiens chromosome 18, clone RP11-622J9, complete sequence Length = 167694 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 taataaaaaagaaaagggaaacaa 134 ||||||| |||||||||||||||| Sbjct: 36854 taataaagaagaaaagggaaacaa 36877
>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence Length = 173808 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 attacacatatatgtatatgctat 192 |||||| ||||||||||||||||| Sbjct: 56808 attacatatatatgtatatgctat 56785
>gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, complete sequence Length = 157324 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aagaaaagggaaacaaagat 138 |||||||||||||||||||| Sbjct: 13414 aagaaaagggaaacaaagat 13395
>gb|AC172372.2| Pan troglodytes BAC clone CH251-1067L6 from chromosome y, complete sequence Length = 192570 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 agaaaatcagaaaggaaatt 171 |||||||||||||||||||| Sbjct: 61916 agaaaatcagaaaggaaatt 61897 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 agaaaatcagaaaggaaatt 171 |||||||||||||||||||| Sbjct: 48088 agaaaatcagaaaggaaatt 48107
>gb|AC008827.6| Homo sapiens chromosome 5 clone CTD-2136P21, complete sequence Length = 68144 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 aatagacataataaaaaagaaaag 126 |||| ||||||||||||||||||| Sbjct: 58616 aataaacataataaaaaagaaaag 58639
>emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in linkage group 1, complete sequence Length = 78932 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 gacaatgaatagacataataaaaa 119 ||||||||||||||| |||||||| Sbjct: 36559 gacaatgaatagacagaataaaaa 36536
>gb|CP000043.1| Bacillus cereus E33L plasmid pE33L8, complete sequence Length = 8191 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gacataataaaaaagaaaag 126 |||||||||||||||||||| Sbjct: 2567 gacataataaaaaagaaaag 2548
>emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in linkage group 5, complete sequence Length = 170010 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gacaatgaatagacataataaaaa 119 |||| ||||||||||||||||||| Sbjct: 146952 gacactgaatagacataataaaaa 146975
>gb|AC022433.5|AC022433 Homo sapiens chromosome 5 clone CTD-3066J14, complete sequence Length = 171668 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 aatagacataataaaaaagaaaag 126 |||| ||||||||||||||||||| Sbjct: 164018 aataaacataataaaaaagaaaag 163995
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttgattgatgtagtacata 29 |||||||||||||||||||| Sbjct: 15435257 tttgattgatgtagtacata 15435276
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ccgggcgccggtggcgttgt 311 |||||||||||||||||||| Sbjct: 24600216 ccgggcgccggtggcgttgt 24600235
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aataaaaaagaaaagggaaa 131 |||||||||||||||||||| Sbjct: 17137132 aataaaaaagaaaagggaaa 17137151
>gb|AC092609.2| Homo sapiens BAC clone RP11-160A16 from 4, complete sequence Length = 150751 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 attacacatatatgtatatg 188 |||||||||||||||||||| Sbjct: 77678 attacacatatatgtatatg 77659
>gb|AC069162.8| Homo sapiens BAC clone RP11-514N8 from 2, complete sequence Length = 44806 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 ataataaaaaagaaaagggaaacaaaga 137 ||||||||||||||||| ||||||||| Sbjct: 20197 ataataaaaaagaaaagaaaaacaaaga 20170
>gb|AC154582.2| Mus musculus BAC clone RP23-381N7 from chromosome 12, complete sequence Length = 194302 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 attacacatatatgtatatg 188 |||||||||||||||||||| Sbjct: 121904 attacacatatatgtatatg 121885
>gb|AC093520.4| Homo sapiens chromosome 16 clone RP11-120K18, complete sequence Length = 168064 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 ataataaaaaagaaaagggaaacaaaga 137 ||||||||||| |||||||||| ||||| Sbjct: 82769 ataataaaaaataaaagggaaaaaaaga 82742
>gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17J6 genomic sequence, complete sequence Length = 92745 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aataaaaaagaaaagggaaa 131 |||||||||||||||||||| Sbjct: 7295 aataaaaaagaaaagggaaa 7314
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gtgacccgggcgccggtggc 306 |||||||||||||||||||| Sbjct: 2769290 gtgacccgggcgccggtggc 2769309
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 agaaaatcagaaaggaaatt 171 |||||||||||||||||||| Sbjct: 5879 agaaaatcagaaaggaaatt 5860
>ref|XM_344460.2| PREDICTED: Rattus norvegicus DAZ interacting protein 1 (predicted) (Dzip1_predicted), mRNA Length = 4587 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaaagaaaagggaaacaaa 135 |||||||||||||||||||| Sbjct: 4432 aaaaagaaaagggaaacaaa 4413
>gb|AY957562.1| Bombina orientalis mitochondrion, complete genome Length = 17173 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aaattacacatatatgtata 186 |||||||||||||||||||| Sbjct: 17088 aaattacacatatatgtata 17069
>gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11F12 genomic sequence, complete sequence Length = 105733 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aataaaaaagaaaagggaaa 131 |||||||||||||||||||| Sbjct: 70473 aataaaaaagaaaagggaaa 70454
>gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosome 12, complete sequence Length = 202288 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gaaaatcagaaaggaaatta 172 |||||||||||||||||||| Sbjct: 54314 gaaaatcagaaaggaaatta 54295
>gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85420 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 aaattacacatatatgtata 186 |||||||||||||||||||| Sbjct: 39786 aaattacacatatatgtata 39805
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 298 gccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 |||||||||||||||||| | ||| ||||| || || |||||||||||||||| Sbjct: 3233 gccggtggcgttgttgaacatgtagacccccgctgccgcgtagatggcctcggtcg 3178
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ccgggcgccggtggcgttgt 311 |||||||||||||||||||| Sbjct: 56283 ccgggcgccggtggcgttgt 56302
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 298 gccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcg 353 |||||||||||||||||| | ||| ||||| || || |||||||||||||||| Sbjct: 1951 gccggtggcgttgttgaacatgtagacccccgctgccgcgtagatggcctcggtcg 1896
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ccgggcgccggtggcgttgt 311 |||||||||||||||||||| Sbjct: 93510 ccgggcgccggtggcgttgt 93529
>emb|AJ297369.1|FAR297369 Festuca arundinacea mRNA for sucrose:sucrose 1-fructosyltransferase (1-SST gene) Length = 2045 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 gtggcgttgttgaagaggta 321 |||||||||||||||||||| Sbjct: 1880 gtggcgttgttgaagaggta 1861
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 aaaatcagaaaggaaattac 173 |||||||||||||||||||| Sbjct: 15850 aaaatcagaaaggaaattac 15869
>gb|AC005386.1|AC005386 citb_57_l_21, complete sequence Length = 196361 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 aaaaaagaaaagggaaacaaagat 138 ||||||||||||||||| |||||| Sbjct: 101171 aaaaaagaaaagggaaataaagat 101194
>gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chromosome IV, near 25 cM, complete sequence Length = 113800 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaaagaaaagggaaacaaa 135 |||||||||||||||||||| Sbjct: 64875 aaaaagaaaagggaaacaaa 64894
>gb|AE003481.3| Drosophila melanogaster chromosome 3L, section 15 of 83 of the complete sequence Length = 315988 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 aataaaaaagaaaagggaaacaaa 135 ||||||||| |||||||||||||| Sbjct: 46902 aataaaaaaaaaaagggaaacaaa 46925
>dbj|AB104414.1| Cucumis melo GeAAT-2 mRNA for alcohol acyltransferase, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 atgaatagacataataaaaa 119 |||||||||||||||||||| Sbjct: 1263 atgaatagacataataaaaa 1282
>dbj|AP001885.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-157K17, complete sequence Length = 173052 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 agaaaagggaaacaaagata 139 |||||||||||||||||||| Sbjct: 19601 agaaaagggaaacaaagata 19582
>gb|BC089964.1| Rattus norvegicus DAZ interacting protein 1, mRNA (cDNA clone IMAGE:7314416), partial cds Length = 1678 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaaagaaaagggaaacaaa 135 |||||||||||||||||||| Sbjct: 1567 aaaaagaaaagggaaacaaa 1548
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttgattgatgtagtacata 29 |||||||||||||||||||| Sbjct: 15443498 tttgattgatgtagtacata 15443517
>gb|U78107.1|HSU78107 Homo sapiens gamma SNAP mRNA, complete cds Length = 1195 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 1027 aaaagaaaagggaaacaaag 1046
>gb|AY823304.1| Norovirus swine/GII/OH-QW101/03/US RNA-dependent RNA polymerase gene, partial cds; and capsid protein and VP2 small basic protein genes, complete cds Length = 3316 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 aaaaagaaaagggaaacaaagata 139 |||| ||||||||||||||||||| Sbjct: 3300 aaaaggaaaagggaaacaaagata 3277
>dbj|AP001099.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-883A18, complete sequence Length = 164343 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaaagaaaagggaaacaaag 136 |||||||||||||||||||| Sbjct: 103666 aaaagaaaagggaaacaaag 103685
>emb|AL645974.7| Mouse DNA sequence from clone RP23-249M13 on chromosome 11, complete sequence Length = 136134 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 taaaaaagaaaagggaaacaaaga 137 |||||||||||||||||| ||||| Sbjct: 114386 taaaaaagaaaagggaaagaaaga 114409 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,653,750 Number of Sequences: 3902068 Number of extensions: 5653750 Number of successful extensions: 160587 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 159903 Number of HSP's gapped (non-prelim): 682 length of query: 362 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 340 effective length of database: 17,147,199,772 effective search space: 5830047922480 effective search space used: 5830047922480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)