>CITXG_LEUMC (O53080) Protein citXG [Includes: Apo-citrate lyase|
           phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
           (Holo-ACP synthase) (Holo-citrate lyase synthase)
           (Apo-ACP nucleodityltransferase);
           2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A sy
          Length = 467

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 62  EKTHLMDRDLELSTALGTYTSQDSREQLGTGGWIFLVFHQNHENIAEAPQHNILEGY 232
           E++HL+ R L+L         Q SRE+LG      L+  ++ +   +   H++ EGY
Sbjct: 109 EESHLLGRLLDLDVMCQNADKQLSREELGFAPRKCLLCGKDAKTCIKEGNHSLAEGY 165

>LGT_MYCPA (P60972) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 427

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
 Frame = -1

Query: 322 IPWVTEF-----PFGYIKDPQYVGSILSLVALLCWVPFQYVVLWCLGYVFMILVEDKEDP 158
           +PW  E      P GYI      G     VAL+    F Y +LW L     +L  D+   
Sbjct: 160 LPWGLEIFYRRDPSGYIDPHSLDGVSTGQVALVVQPTFLYELLWNLLIFVALLYADRRLT 219

Query: 157 ATRAKLLS*VLTGVC 113
               +L +  + G C
Sbjct: 220 LGHGRLFALYVAGYC 234

>UBIA_ECOLI (P0AGK1) 4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB|
           polyprenyltransferase)
          Length = 290

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 280 PQYVGSILSLVALLCWVPFQYVVLWCLGYVFMILVEDKED 161
           P    ++   V L CW+ F   +LW + Y     + D++D
Sbjct: 155 PMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDD 194

>UBIA_ECOL6 (P0AGK2) 4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB|
           polyprenyltransferase)
          Length = 290

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 280 PQYVGSILSLVALLCWVPFQYVVLWCLGYVFMILVEDKED 161
           P    ++   V L CW+ F   +LW + Y     + D++D
Sbjct: 155 PMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDD 194

>UBIA_ECO57 (P0AGK3) 4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB|
           polyprenyltransferase)
          Length = 290

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 280 PQYVGSILSLVALLCWVPFQYVVLWCLGYVFMILVEDKED 161
           P    ++   V L CW+ F   +LW + Y     + D++D
Sbjct: 155 PMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDD 194

>SYT4_RAT (P50232) Synaptotagmin-4 (Synaptotagmin IV) (SytIV)|
          Length = 425

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 21/71 (29%), Positives = 31/71 (43%)
 Frame = +2

Query: 62  EKTHLMDRDLELSTALGTYTSQDSREQLGTGGWIFLVFHQNHENIAEAPQHNILEGYPTQ 241
           EK  +    L+ ST+L   TS++ +E+LGT   +FL    N E  A        +G P  
Sbjct: 130 EKEAVSPESLKSSTSL---TSEEKQEKLGT---LFLSLEYNFEKKAFVVNIKEAQGLPAM 183

Query: 242 QRHEAQDAPHI 274
                   P+I
Sbjct: 184 DEQSMTSDPYI 194

>FPRL1_MACMU (P79190) FMLP-related receptor I (FMLP-R-I) (Fragment)|
          Length = 348

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 295 GYIKDPQYVGSILSLVA--LLCWVPFQYVVLWCLGYVFMILVEDK 167
           G IK  + +  + ++VA   +CW PFQ V L    ++  ILV+ K
Sbjct: 229 GMIKSSRPLRVLTAVVASFFICWFPFQLVALLSTVWLKEILVDGK 273

>IFT74_HUMAN (Q96LB3) Intraflagellar transport 74 homolog (Coiled-coil|
           domain-containing protein 2) (Capillary morphogenesis
           protein 1) (CMG-1)
          Length = 600

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/55 (30%), Positives = 20/55 (36%)
 Frame = +1

Query: 118 HQSRLKRATWHGWLDLPCLPPKS*KHSRGTTTQHTGRVPNTAAPRGSGCSPHTAG 282
           H+S   R    G + L   PP   +   G     T   P TA P   GC   T G
Sbjct: 5   HKSSAARPVSRGGVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59

>PTC1_BRARE (Q98864) Protein patched homolog 1 (Patched 1) (PTC1)|
          Length = 1220

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +1

Query: 133 KRATWHGWLDLPCLPPKS*KHSRGTTTQHTGRVPNTAAPRGSGC 264
           K    H +++ PCL P           +   +VPN AA    GC
Sbjct: 267 KAQVGHAYMNRPCLDPSDTDCPHSAPNKDPWQVPNIAAELQGGC 310

>VID21_EMENI (Q5B4Q8) Chromatin modification-related protein vid21|
          Length = 1447

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/54 (20%), Positives = 23/54 (42%)
 Frame = +2

Query: 170 VFHQNHENIAEAPQHNILEGYPTQQRHEAQDAPHILRVLDVAEGELCHPRDLLP 331
           + H   + +  + + ++ EG+P + RH  QD      +  +   E     D+ P
Sbjct: 664 ISHPTPDLVPSSEEDSVSEGFPDEPRHGLQDTVAPAAIFSLGSDEFTFSLDMTP 717

>V1AR_MOUSE (Q62463) Vasopressin V1a receptor (V1aR) (Vascular/hepatic-type|
           arginine vasopressin receptor) (Antidiuretic hormone
           receptor 1a) (AVPR V1a)
          Length = 423

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 244 LLCWVPFQYVVLWCLGYVFMILVEDKEDPATRAKLLS*VLTGVC 113
           +LCW PF  V +W +     +   D E+P+T    L   L   C
Sbjct: 306 ILCWTPFFIVQMWSVWDTNFVWT-DSENPSTTITALLASLNSCC 348

>Y1724_MYCBO (P64884) Hypothetical protein Mb1724 precursor|
          Length = 314

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 176 GRQGRSSHPCQVALLSLDWCMCRVRLITRDLCPLGVFFPGRVPVILAKHSLI 21
           GR G ++ P  VA+   D  M        D+       PGR+ VILA H LI
Sbjct: 246 GRDGSANRPAAVAVTRADADMAAEISTVDDIDAE----PGRITVILALHDLI 293

>Y1698_MYCTU (P64883) Hypothetical protein Rv1698/MT1737 precursor|
          Length = 314

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 176 GRQGRSSHPCQVALLSLDWCMCRVRLITRDLCPLGVFFPGRVPVILAKHSLI 21
           GR G ++ P  VA+   D  M        D+       PGR+ VILA H LI
Sbjct: 246 GRDGSANRPAAVAVTRADADMAAEISTVDDIDAE----PGRITVILALHDLI 293

>XYLA_RHIME (Q92LW9) Xylose isomerase (EC 5.3.1.5)|
          Length = 436

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/60 (30%), Positives = 24/60 (40%)
 Frame = +2

Query: 50  GHVQEKTHLMDRDLELSTALGTYTSQDSREQLGTGGWIFLVFHQNHENIAEAPQHNILEG 229
           GH     H  + +L L+ ALG + S D        GW    F  N   +A A  H +  G
Sbjct: 269 GHAILAGHSFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGG 328

>DAF_PONPY (P49457) Complement decay-accelerating factor precursor (CD55|
           antigen) (Fragment)
          Length = 340

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = +3

Query: 81  TEISSYQPHSAHTPVKTQESNLARVAGSSLSSTKIMKT*PRHHNTTYWKGTQHSSATRLR 260
           TE+S   P S  T  KT   N       +  ST + +T    H TT  KG+  +S T   
Sbjct: 266 TEVS---PTSQKTTTKTTTPN-----AQATRSTPVSRTTKHFHETTPNKGSGTTSGTTSL 317

Query: 261 MLPTYCGSLM*PKGNSVTHGI 323
           +    C +L    G  VT G+
Sbjct: 318 LSGHKCFTLTGLLGTLVTMGL 338

>DAF_HUMAN (P08174) Complement decay-accelerating factor precursor (CD55|
           antigen)
          Length = 381

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = +3

Query: 81  TEISSYQPHSAHTPVKTQESNLARVAGSSLSSTKIMKT*PRHHNTTYWKGTQHSSATRLR 260
           TE+S   P S  T  KT   N       +  ST + +T    H TT  KG+  +S T   
Sbjct: 307 TEVS---PTSQKTTTKTTTPN-----AQATRSTPVSRTTKHFHETTPNKGSGTTSGTTRL 358

Query: 261 MLPTYCGSLM*PKGNSVTHGI 323
           +    C +L    G  VT G+
Sbjct: 359 LSGHTCFTLTGLLGTLVTMGL 379

>ATKA_METCA (Q605R1) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 595

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 24/74 (32%), Positives = 30/74 (40%)
 Frame = +2

Query: 92  ELSTALGTYTSQDSREQLGTGGWIFLVFHQNHENIAEAPQHNILEGYPTQQRHEAQDAPH 271
           E + ALG   SQ + +QLGT G  F   +  H      P  N LE               
Sbjct: 243 EQTLALGPAASQVAIKQLGTNGGGFFSVNSAHPFENPTPFSNFLE--------------- 287

Query: 272 ILRVLDVAEGELCH 313
           +L +L V  G LCH
Sbjct: 288 MLAIL-VISGALCH 300

>CP190_DROME (Q24478) Centrosome-associated zinc finger protein CP190 (DMAP190)|
           (Protein enhancer of mod(mdg4)4-1)
          Length = 1096

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 46  TGTRPGKNTPNGQRSRVINRTRHIHQSRLKRATWHGWLDLPC 171
           TG  P  NT   Q+ R+ ++T H   ++    T   WL L C
Sbjct: 434 TGANPPANTAAAQKRRIDSKTMHALIAQGAENTTGPWLCLRC 475

>COHA1_CANFA (Q9N281) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2) (Fragment)
          Length = 709

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 27/92 (29%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
 Frame = +1

Query: 58  PGKNTPNGQRSRVINRTRHIHQSRLKRATWHGWLDLPCLPPKS*KHSRGTT----TQHTG 225
           PG   P GQ+  V          +  R    G    P  P    K  RG       Q   
Sbjct: 600 PGPQGPKGQKGSVGEPGMEGPMGQKGREGPMGPRGEPGPPGFGEKGDRGAAGEPGVQGPP 659

Query: 226 RVPNTAAPRGSGCSPHTAGP*CSRRGTLSPTG 321
            VP +  P+GSG SP   GP     G + P G
Sbjct: 660 GVPGSVGPKGSGGSPGPRGP----PGPMGPQG 687


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,821,368
Number of Sequences: 219361
Number of extensions: 1155724
Number of successful extensions: 3870
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3870
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)