ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet51f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, comp... 44 0.13
2gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, comp... 44 0.13
3ref|NM_001031296.1| Gallus gallus splicing factor, arginine/seri... 42 0.50
4emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clo... 42 0.50
5emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22 42 0.50
6gb|AF542529.2| Cryptococcus neoformans var. grubii strain H99 ma... 40 2.0
7ref|XM_464952.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.0
8gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, co... 40 2.0
9gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 2.0
10emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in... 40 2.0
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
12dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor... 40 2.0
13gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoieti... 40 2.0
14dbj|AB162659.1| Ipomoea batatas retrotransposon Rtsp-1 DNA, comp... 40 2.0
15dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
16dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
17gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q... 40 2.0
18gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome 40 2.0
19gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosom... 40 2.0
20emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on ch... 40 2.0
21gb|AC167559.2| Echinops telfairi, clone Echinops telfairi -24239... 38 7.8
22gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, com... 38 7.8
23gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome... 38 7.8
24gb|AC132108.4| Mus musculus BAC clone RP24-257B11 from chromosom... 38 7.8
25gb|AC117814.14| Mus musculus chromosome 15, clone RP24-572J18, c... 38 7.8
26gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, co... 38 7.8
27gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Can... 38 7.8
28gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 38 7.8
29gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, co... 38 7.8
30gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome ... 38 7.8
31gb|AY512964.1| Oncorhynchus mykiss SLC26A1-like protein mRNA, co... 38 7.8
32gb|AC012490.3| Homo sapiens BAC clone RP11-164G2 from 7, complet... 38 7.8
33emb|BX927339.16| Zebrafish DNA sequence from clone CH211-251A10 ... 38 7.8
34gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosom... 38 7.8
35gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, comple... 38 7.8
36emb|AL390917.12| Human DNA sequence from clone RP11-247O12 on ch... 38 7.8
37emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chr... 38 7.8
38emb|AL159174.10| Human DNA sequence from clone RP11-16C18 on chr... 38 7.8
39gb|AC091000.2| Rattus norvegicus strain Brown Norway clone RP31-... 38 7.8
40emb|AL138713.12| Human DNA sequence from clone RP11-552M6 on chr... 38 7.8
41emb|AL138810.10| Human DNA sequence from clone RP1-179L10 on chr... 38 7.8
42emb|Z29971.1|SPTRHA6PS S.pombe gene for trehalose-6-phosphate sy... 38 7.8
43emb|AL360054.1|SPAC328 S.pombe chromosome I cosmid c328 38 7.8
44emb|AJ298105.1|HSA298105 Homo sapiens PDX1 gene for lipoyl-conta... 38 7.8
45emb|AL607107.8| Mouse DNA sequence from clone RP23-230C18 on chr... 38 7.8
46emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in... 38 7.8
47gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, comp... 38 7.8
48emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 38 7.8
49gb|AF391296.1| Branchiostoma floridae cosmid MPMGc117H1057, part... 38 7.8
50gb|AF391295.1| Branchiostoma floridae cosmid MPMGc117C2425, part... 38 7.8
51gb|AC107021.4| Homo sapiens 3 BAC RP11-274H2 (Roswell Park Cance... 38 7.8
52gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, comple... 38 7.8
53dbj|AK163162.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 38 7.8
54dbj|AK171763.1| Mus musculus activated spleen cDNA, RIKEN full-l... 38 7.8
55emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in ... 38 7.8
56gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosom... 38 7.8
57dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
58dbj|AB219140.2| Rattus norvegicus LAT-2 like mRNA, 3'UTR 38 7.8
59gb|AC151548.3| Macropus eugenii clone ME_KBa-603H10, complete se... 38 7.8
60gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Can... 38 7.8
61gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromoso... 38 7.8
62gb|AC151966.3| Mus musculus BAC clone RP24-178P9 from chromosome... 38 7.8
63gb|AC048344.44| Homo sapiens 12 BAC RP11-843B15 (Roswell Park Ca... 38 7.8
64gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Canc... 38 7.8
65dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
66emb|CR536610.13| Zebrafish DNA sequence from clone CH211-200P13 ... 38 7.8
67dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 7.8
68gb|AC108415.10| Mus musculus chromosome 15, clone RP23-341K14, c... 38 7.8
69emb|AL772299.10| Mouse DNA sequence from clone RP23-158L6 on chr... 38 7.8
70gb|AC134436.4| Mus musculus BAC clone RP24-439M12 from 13, compl... 38 7.8
71emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d... 38 7.8
72gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, compl... 38 7.8
73dbj|AP007285.1| Lotus japonicus genomic DNA, chromosome 2, clone... 38 7.8
74gb|AY067715.1| Schmidtea mediterranea clone H.100.1e(T3) unknown... 38 7.8
75dbj|AP002085.1| Homo sapiens genomic DNA, chromosome 21, BAC clo... 38 7.8
76dbj|AP001630.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 38 7.8
77dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 38 7.8
78emb|AL713982.4| Mouse DNA sequence from clone RP23-274A14 on chr... 38 7.8 
>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence
          Length = 142656

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 25     gttgattattcaaacagccaaa 46
              ||||||||||||||||||||||
Sbjct: 119629 gttgattattcaaacagccaaa 119650
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>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence
          Length = 154939

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 25    gttgattattcaaacagccaaa 46
             ||||||||||||||||||||||
Sbjct: 70617 gttgattattcaaacagccaaa 70638
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>ref|NM_001031296.1| Gallus gallus splicing factor, arginine/serine-rich 11 (SFRS11), mRNA
          Length = 2625

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clone 20o8
          Length = 2625

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22
          Length = 759

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 40  agccaaaacaaaacccagggggaaa 64
           ||||||||||||||||| |||||||
Sbjct: 194 agccaaaacaaaacccacggggaaa 170
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>gb|AF542529.2| Cryptococcus neoformans var. grubii strain H99 mating type alpha locus,
             complete sequence
          Length = 124734

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 134   gatgccattccatttgttgtttac 157
             ||||||||||||| ||||||||||
Sbjct: 81758 gatgccattccatctgttgtttac 81735
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>ref|XM_464952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3558

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   acaaattttgactgcaatct 91
            ||||||||||||||||||||
Sbjct: 1744 acaaattttgactgcaatct 1763
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>gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, complete sequence
          Length = 121683

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 121155 aaacacacaaacaaattttg 121136



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 116267 aaacacacaaacaaattttg 116248



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 113475 aaacacacaaacaaattttg 113456



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 108605 aaacacacaaacaaattttg 108586



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 104518 aaacacacaaacaaattttg 104499
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>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gcaagcacacatatcatctt 118
             ||||||||||||||||||||
Sbjct: 56902 gcaagcacacatatcatctt 56921
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>emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in linkage group 18,
             complete sequence
          Length = 30929

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gggggaaacacacaaacaaa 76
             ||||||||||||||||||||
Sbjct: 14594 gggggaaacacacaaacaaa 14613
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 29       attattcaaacagccaaaacaaaaccca 56
                ||||| ||||||||||||| ||||||||
Sbjct: 23775776 attatccaaacagccaaaaaaaaaccca 23775803



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       acaaattttgactgcaatct 91
                ||||||||||||||||||||
Sbjct: 10505544 acaaattttgactgcaatct 10505563
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>dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor, complete cds
          Length = 11451

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 10145 attattcaaacagccaaaccaaaa 10122
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>gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoietin A; scatter factor)
             (HGF) gene, complete cds
          Length = 73491

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 71267 attattcaaacagccaaaccaaaa 71244
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>dbj|AB162659.1| Ipomoea batatas retrotransposon Rtsp-1 DNA, complete sequence
          Length = 4968

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   agcctgttgattattcaaac 39
            ||||||||||||||||||||
Sbjct: 2416 agcctgttgattattcaaac 2435
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>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0063E14
          Length = 174415

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acaaattttgactgcaatct 91
             ||||||||||||||||||||
Sbjct: 86712 acaaattttgactgcaatct 86731
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 29    attattcaaacagccaaaacaaaaccca 56
             ||||| ||||||||||||| ||||||||
Sbjct: 86360 attatccaaacagccaaaaaaaaaccca 86387
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>gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q11.23-q21, complete sequence
          Length = 143834

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 47574 attattcaaacagccaaaccaaaa 47597
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>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 9       aatcgttcgatagcctgttg 28
               ||||||||||||||||||||
Sbjct: 1150324 aatcgttcgatagcctgttg 1150343
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>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete
             sequence
          Length = 105368

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 33049 aaacacacaaacaaattttg 33068



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 28962 aaacacacaaacaaattttg 28981



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 24092 aaacacacaaacaaattttg 24111



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 21300 aaacacacaaacaaattttg 21319



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 16412 aaacacacaaacaaattttg 16431
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>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete
             sequence
          Length = 211585

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcaaacagccaaaacaaaac 53
             ||||||||||||||||||||
Sbjct: 19090 tcaaacagccaaaacaaaac 19071
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>gb|AC167559.2| Echinops telfairi, clone Echinops telfairi -24239157I1, complete
            sequence
          Length = 35266

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 64   acacacaaacaaattttga 82
            |||||||||||||||||||
Sbjct: 2285 acacacaaacaaattttga 2267
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>gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, complete sequence
          Length = 191698

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 112    tcatcttctgcaatcccat 130
              |||||||||||||||||||
Sbjct: 168489 tcatcttctgcaatcccat 168507
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>gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome 18, complete sequence
          Length = 216368

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    caaacagccaaaacaaaac 53
             |||||||||||||||||||
Sbjct: 84154 caaacagccaaaacaaaac 84172
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>gb|AC132108.4| Mus musculus BAC clone RP24-257B11 from chromosome 3, complete sequence
          Length = 162109

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     ggggaaacacacaaacaaa 76
              |||||||||||||||||||
Sbjct: 146999 ggggaaacacacaaacaaa 147017
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>gb|AC117814.14| Mus musculus chromosome 15, clone RP24-572J18, complete sequence
          Length = 169092

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    caaacagccaaaacaaaac 53
             |||||||||||||||||||
Sbjct: 55276 caaacagccaaaacaaaac 55258
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>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence
          Length = 154206

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     ttattcaaacagccaaaac 48
              |||||||||||||||||||
Sbjct: 127038 ttattcaaacagccaaaac 127020
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>gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 183897

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     aacaaaacccagggggaaa 64
              |||||||||||||||||||
Sbjct: 158980 aacaaaacccagggggaaa 158962
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 41      gccaaaacaaaacccaggg 59
               |||||||||||||||||||
Sbjct: 1089167 gccaaaacaaaacccaggg 1089185
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>gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, complete sequence
          Length = 188471

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 35   caaacagccaaaacaaaac 53
            |||||||||||||||||||
Sbjct: 3214 caaacagccaaaacaaaac 3232
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>gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome 9, complete sequence
          Length = 247463

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 44     aaaacaaaacccagggggaaaca 66
              |||||||||||||| ||||||||
Sbjct: 143357 aaaacaaaacccagcgggaaaca 143335
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>gb|AY512964.1| Oncorhynchus mykiss SLC26A1-like protein mRNA, complete cds
          Length = 3281

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 134  gatgccattccatttgttg 152
            |||||||||||||||||||
Sbjct: 2386 gatgccattccatttgttg 2404
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>gb|AC012490.3| Homo sapiens BAC clone RP11-164G2 from 7, complete sequence
          Length = 71807

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 133  ggatgccattccatttgtt 151
            |||||||||||||||||||
Sbjct: 5216 ggatgccattccatttgtt 5198
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>emb|BX927339.16| Zebrafish DNA sequence from clone CH211-251A10 in linkage group 17,
             complete sequence
          Length = 66778

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    caaacagccaaaacaaaac 53
             |||||||||||||||||||
Sbjct: 11613 caaacagccaaaacaaaac 11631
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>gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosome 9, complete sequence
          Length = 200985

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 44     aaaacaaaacccagggggaaaca 66
              |||||||||||||| ||||||||
Sbjct: 181213 aaaacaaaacccagcgggaaaca 181191
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>gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, complete sequence
          Length = 214272

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 133   ggatgccattccatttgtt 151
             |||||||||||||||||||
Sbjct: 22106 ggatgccattccatttgtt 22088
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>emb|AL390917.12| Human DNA sequence from clone RP11-247O12 on chromosome X, complete
           sequence
          Length = 20318

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 133 ggatgccattccatttgtt 151
           |||||||||||||||||||
Sbjct: 484 ggatgccattccatttgtt 466
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>emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chromosome 6 Contains a
            novel gene (HSPC125, my013, FLJ22592) and two CpG
            islands, complete sequence
          Length = 114521

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 35   caaacagccaaaacaaaac 53
            |||||||||||||||||||
Sbjct: 4655 caaacagccaaaacaaaac 4637
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>emb|AL159174.10| Human DNA sequence from clone RP11-16C18 on chromosome 6 Contains part
             of the ANKRD6 gene for ankyrin repeat domain 6, a novel
             gene and the 3' end of a novel gene, complete sequence
          Length = 93280

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    attattcaaacagccaaaa 47
             |||||||||||||||||||
Sbjct: 32295 attattcaaacagccaaaa 32277
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>gb|AC091000.2| Rattus norvegicus strain Brown Norway clone RP31-485F9, complete
             sequence
          Length = 168533

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    acagccaaaacaaaaccca 56
             |||||||||||||||||||
Sbjct: 67872 acagccaaaacaaaaccca 67890
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>emb|AL138713.12| Human DNA sequence from clone RP11-552M6 on chromosome 13q21.31-22.2
             Contains part of the KLF12 gene for Kruppel-like factor
             12, complete sequence
          Length = 121896

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    ccaaaacaaaacccagggg 60
             |||||||||||||||||||
Sbjct: 28266 ccaaaacaaaacccagggg 28284
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>emb|AL138810.10| Human DNA sequence from clone RP1-179L10 on chromosome 11p12-14.1
             Contains a gene encoding the dihydroxylipoamide
             dehydrogenase-binding protein of pyruvate dehydrogenase
             complex (E3-binding protein), a gene similar to the CGI-29
             protein, a CpG island, ESTs, STSs and GSSs, complete
             sequence
          Length = 128228

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    aacacacaaacaaattttg 81
             |||||||||||||||||||
Sbjct: 44668 aacacacaaacaaattttg 44686
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>emb|Z29971.1|SPTRHA6PS S.pombe gene for trehalose-6-phosphate synthase
          Length = 1993

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 140 attccatttgttgtttacc 158
           |||||||||||||||||||
Sbjct: 39  attccatttgttgtttacc 57
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>emb|AL360054.1|SPAC328 S.pombe chromosome I cosmid c328
          Length = 25985

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 140  attccatttgttgtttacc 158
            |||||||||||||||||||
Sbjct: 7313 attccatttgttgtttacc 7331
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>emb|AJ298105.1|HSA298105 Homo sapiens PDX1 gene for lipoyl-containing component X, exons 1-11
          Length = 128228

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aacacacaaacaaattttg 81
             |||||||||||||||||||
Sbjct: 83561 aacacacaaacaaattttg 83543
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>emb|AL607107.8| Mouse DNA sequence from clone RP23-230C18 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 125442

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    ggggaaacacacaaacaaa 76
             |||||||||||||||||||
Sbjct: 29842 ggggaaacacacaaacaaa 29860
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>emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in linkage group 8, complete
              sequence
          Length = 196375

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     ttcaaacagccaaaacaaa 51
              |||||||||||||||||||
Sbjct: 154300 ttcaaacagccaaaacaaa 154282
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>gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, complete sequence
          Length = 169989

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     tagcctgttgattattcaa 37
              |||||||||||||||||||
Sbjct: 123479 tagcctgttgattattcaa 123497
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>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11,
             complete sequence
          Length = 252675

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    caaacaaattttgactgca 87
             |||||||||||||||||||
Sbjct: 33704 caaacaaattttgactgca 33686
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>gb|AF391296.1| Branchiostoma floridae cosmid MPMGc117H1057, partial sequence
          Length = 40987

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 66   acacaaacaaattttgact 84
            |||||||||||||||||||
Sbjct: 1046 acacaaacaaattttgact 1064
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>gb|AF391295.1| Branchiostoma floridae cosmid MPMGc117C2425, partial sequence
          Length = 35861

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    acacaaacaaattttgact 84
             |||||||||||||||||||
Sbjct: 33639 acacaaacaaattttgact 33657
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>gb|AC107021.4| Homo sapiens 3 BAC RP11-274H2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161731

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     agccaaaacaaaacccagg 58
              |||||||||||||||||||
Sbjct: 113744 agccaaaacaaaacccagg 113762
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>gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, complete sequence
          Length = 169281

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 58     ggggaaacacacaaacaaatttt 80
              ||||||||||||||||| |||||
Sbjct: 126318 ggggaaacacacaaacacatttt 126296
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>dbj|AK163162.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730057H10
            product:unclassifiable, full insert sequence
          Length = 2994

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 35   caaacagccaaaacaaaac 53
            |||||||||||||||||||
Sbjct: 1074 caaacagccaaaacaaaac 1056
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>dbj|AK171763.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830009G08
           product:synaptosomal-associated protein 23, full insert
           sequence
          Length = 2247

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 115 tcttctgcaatcccatccg 133
           |||||||||||||||||||
Sbjct: 761 tcttctgcaatcccatccg 743
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>emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in linkage group 8,
             complete sequence
          Length = 202747

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    ttcaaacagccaaaacaaa 51
             |||||||||||||||||||
Sbjct: 48372 ttcaaacagccaaaacaaa 48390
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>gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosome 13, complete
            sequence
          Length = 181617

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 58   ggggaaacacacaaacaaa 76
            |||||||||||||||||||
Sbjct: 5192 ggggaaacacacaaacaaa 5174
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 76       attttgactgcaatctgaacaac 98
                |||||| ||||||||||||||||
Sbjct: 25713719 attttgtctgcaatctgaacaac 25713741
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>dbj|AB219140.2| Rattus norvegicus LAT-2 like mRNA, 3'UTR
          Length = 457

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  acagccaaaacaaaaccca 56
           |||||||||||||||||||
Sbjct: 295 acagccaaaacaaaaccca 277
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>gb|AC151548.3| Macropus eugenii clone ME_KBa-603H10, complete sequence
          Length = 111549

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    gccaaaacaaaacccaggg 59
             |||||||||||||||||||
Sbjct: 26480 gccaaaacaaaacccaggg 26498
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>gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 209920

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    aacaaaacccagggggaaa 64
             |||||||||||||||||||
Sbjct: 11774 aacaaaacccagggggaaa 11756
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>gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromosome 7, complete
             sequence
          Length = 164152

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 54    ccagggggaaacacacaaacaaa 76
             ||||||||||||| |||||||||
Sbjct: 84826 ccagggggaaacaaacaaacaaa 84804
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>gb|AC151966.3| Mus musculus BAC clone RP24-178P9 from chromosome 9, complete sequence
          Length = 159840

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 44    aaaacaaaacccagggggaaaca 66
             |||||||||||||| ||||||||
Sbjct: 91550 aaaacaaaacccagcgggaaaca 91528
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>gb|AC048344.44| Homo sapiens 12 BAC RP11-843B15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 124427

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    caaacagccaaaacaaaac 53
             |||||||||||||||||||
Sbjct: 73873 caaacagccaaaacaaaac 73855
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>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 187215

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    caaacagccaaaacaaaac 53
             |||||||||||||||||||
Sbjct: 54474 caaacagccaaaacaaaac 54456
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    attttgactgcaatctgaacaac 98
             |||||| ||||||||||||||||
Sbjct: 30881 attttgtctgcaatctgaacaac 30903
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>emb|CR536610.13| Zebrafish DNA sequence from clone CH211-200P13 in linkage group 20,
             complete sequence
          Length = 89050

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    aacccagggggaaacacac 69
             |||||||||||||||||||
Sbjct: 58914 aacccagggggaaacacac 58896
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>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     aaacacacaaacaaattttgact 84
              ||||| |||||||||||||||||
Sbjct: 207115 aaacaaacaaacaaattttgact 207137
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>gb|AC108415.10| Mus musculus chromosome 15, clone RP23-341K14, complete sequence
          Length = 194640

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    ttattcaaacagccaaaac 48
             |||||||||||||||||||
Sbjct: 47576 ttattcaaacagccaaaac 47558
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>emb|AL772299.10| Mouse DNA sequence from clone RP23-158L6 on chromosome 2, complete
             sequence
          Length = 203368

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 115   tcttctgcaatcccatccg 133
             |||||||||||||||||||
Sbjct: 58400 tcttctgcaatcccatccg 58382
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>gb|AC134436.4| Mus musculus BAC clone RP24-439M12 from 13, complete sequence
          Length = 128990

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    ggggaaacacacaaacaaa 76
             |||||||||||||||||||
Sbjct: 10809 ggggaaacacacaaacaaa 10827
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>emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d20, COMPLETE SEQUENCE
          Length = 131814

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   acacatatcatcttctgca 123
             |||||||||||||||||||
Sbjct: 88426 acacatatcatcttctgca 88408
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>gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, complete sequence
          Length = 191505

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     caaacagccaaaacaaaac 53
              |||||||||||||||||||
Sbjct: 142641 caaacagccaaaacaaaac 142659
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>dbj|AP007285.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01H08, TM0053,
             complete sequence
          Length = 109326

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    acacacaaacaaattttga 82
             |||||||||||||||||||
Sbjct: 32305 acacacaaacaaattttga 32323
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>gb|AY067715.1| Schmidtea mediterranea clone H.100.1e(T3) unknown mRNA sequence
          Length = 791

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 69  caaacaaattttgactgca 87
           |||||||||||||||||||
Sbjct: 283 caaacaaattttgactgca 265
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>dbj|AP002085.1| Homo sapiens genomic DNA, chromosome 21, BAC clone:KB274G10,
             MX1-D21S171 region, complete sequence
          Length = 97015

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    aaacacacaaacaaattttgact 84
             ||||| |||||||||||||||||
Sbjct: 32644 aaacaaacaaacaaattttgact 32666
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>dbj|AP001630.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1151C12, MX1-D21S171
              region, complete sequence
          Length = 151846

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     aaacacacaaacaaattttgact 84
              ||||| |||||||||||||||||
Sbjct: 112692 aaacaaacaaacaaattttgact 112714
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>dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2007G4, MX1-D21S171
             region, complete sequence
          Length = 148179

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    aaacacacaaacaaattttgact 84
             ||||| |||||||||||||||||
Sbjct: 11403 aaacaaacaaacaaattttgact 11425
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>emb|AL713982.4| Mouse DNA sequence from clone RP23-274A14 on chromosome X, complete
             sequence
          Length = 131633

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    ggggaaacacacaaacaaa 76
             |||||||||||||||||||
Sbjct: 60908 ggggaaacacacaaacaaa 60890


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,676,991
Number of Sequences: 3902068
Number of extensions: 2676991
Number of successful extensions: 174586
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 174259
Number of HSP's gapped (non-prelim): 327
length of query: 161
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 139
effective length of database: 17,147,199,772
effective search space: 2383460768308
effective search space used: 2383460768308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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