>BETT_ECOLI (P0ABC9) High-affinity choline transport protein|
          Length = 677

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 106 IYTYMHYSTTSCTQYSLARWAASGFDSLHLSLPLCRRTSPTPAWSRR 246
           ++T  HY  T  + Y+L   A  G+ S   +LPL  R++  P + +R
Sbjct: 140 VWTLFHYGLTGWSMYALMGMAL-GYFSYRYNLPLTIRSALYPIFGKR 185

>BETT_ECO57 (P0ABD0) High-affinity choline transport protein|
          Length = 677

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 106 IYTYMHYSTTSCTQYSLARWAASGFDSLHLSLPLCRRTSPTPAWSRR 246
           ++T  HY  T  + Y+L   A  G+ S   +LPL  R++  P + +R
Sbjct: 140 VWTLFHYGLTGWSMYALMGMAL-GYFSYRYNLPLTIRSALYPIFGKR 185

>SYK_RICPR (Q9ZDF8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 528

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 63  YLAREDPNTSSYTNYLHVYALQYY 134
           Y  +  PNTS+Y ++L  +A++YY
Sbjct: 403 YEPKATPNTSTYLDHLTEFAIRYY 426


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,961,328
Number of Sequences: 219361
Number of extensions: 631640
Number of successful extensions: 1406
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)