ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet51a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-ass... 28 6.9
2KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-ass... 28 9.0
3KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-ass... 28 9.0

>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein|
           5.7) (Ultrahigh sulfur keratin-associated protein 5.7)
           (Keratin-associated protein 5-3) (Keratin-associated
           protein 5.3)
          Length = 165

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 147 GCRGACGSANVSCWMVACFSVKVGASSRVRLTIALWCISSSC 22
           GC G+CG +  SC+   C S   G+S          C  SSC
Sbjct: 86  GC-GSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCCQSSC 126



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>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 147 GCRGACGSANVSCWMVACFSVKVGASSRVRLTIALWCISSSC 22
           GC G+CG +  SC+   C S   G+S          C  SSC
Sbjct: 79  GC-GSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSC 119



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>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -3

Query: 147 GCRGACGSANVSCWMVACFSVKVGASSRVRLTIALWCISSSCHP 16
           GC G+CG +  SC+   C S   G+S          C SS C P
Sbjct: 120 GC-GSCGCSQCSCYKPCCCSSGCGSSC---------CQSSCCKP 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.117    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,060,172
Number of Sequences: 219361
Number of extensions: 304512
Number of successful extensions: 466
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 80,573,946
effective HSP length: 26
effective length of database: 74,870,560
effective search space used: 1796893440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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