ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet50g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 299 1e-78
2emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine di... 60 2e-06
3emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diph... 60 2e-06
4gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.031
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.031
6gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 46 0.031
7gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 44 0.12
8gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, comp... 42 0.49
9gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, comp... 42 0.49
10dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 0.49
11gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete s... 40 1.9
12ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, iso... 40 1.9
13gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 1.9
14gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 40 1.9
15emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chro... 40 1.9
16emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chrom... 40 1.9
17emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 1.9
18gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Can... 40 1.9
19dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 1.9
20gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete... 40 1.9
21gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 1.9
22gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence 38 7.7
23gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosom... 38 7.7
24gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incom... 38 7.7
25gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 7.7
26gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome... 38 7.7
27gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, comp... 38 7.7
28ref|XM_754052.1| Ustilago maydis 521 hypothetical protein (UM029... 38 7.7
29gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, compl... 38 7.7
30gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, compl... 38 7.7
31gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome... 38 7.7
32gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosom... 38 7.7
33gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, compl... 38 7.7
34gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 38 7.7
35gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, compl... 38 7.7
36ref|XM_724139.1| Plasmodium yoelii yoelii str. 17XNL mature para... 38 7.7
37gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, comple... 38 7.7
38gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, comple... 38 7.7
39gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete s... 38 7.7
40emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chr... 38 7.7
41emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 ... 38 7.7
42gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's H... 38 7.7
43emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 38 7.7
44emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 7.7
45emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 38 7.7
46gb|AY293855.1| Homo sapiens insulin-like growth factor 2 recepto... 38 7.7
47gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, c... 38 7.7
48gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 38 7.7
49gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, comp... 38 7.7
50gb|AF069333.2|AF069333 Homo sapiens insulin-like growth factor I... 38 7.7
51gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, com... 38 7.7
52gb|AF348209.1|AF348209 Homo sapiens IGF2R gene, complete cds 38 7.7
53gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, com... 38 7.7
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
55gb|AC084520.1|CBRG18K16 Caenorhabditis briggsae cosmid G18K16, c... 38 7.7
56gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, comp... 38 7.7
57gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana... 38 7.7
58emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, c... 38 7.7
59dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
60dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 38 7.7
61emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, ... 38 7.7
62dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
63emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 ... 38 7.7
64gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, comp... 38 7.7
65gb|U58761.2| Caenorhabditis elegans cosmid C01F1, complete sequence 38 7.7
66emb|AL929504.9| Zebrafish DNA sequence from clone CH211-155A11 i... 38 7.7
67emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, comp... 38 7.7
68gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, co... 38 7.7
69gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, co... 38 7.7 
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score =  299 bits (151), Expect = 1e-78
 Identities = 158/159 (99%), Gaps = 1/159 (0%)
 Strand = Plus / Minus

                                                                       
Query: 2   gaaattgatatgaaaaattaaacacaacttgaaa-cagactcggagttgacctcacaagc 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 798 gaaattgatatgaaaaattaaacacaacttgaaatcagactcggagttgacctcacaagc 739

                                                                       
Query: 61  gcacgaacacatgcatcaaattaaaccgacacgctgacaccacgacgacctttgctgaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gcacgaacacatgcatcaaattaaaccgacacgctgacaccacgacgacctttgctgaga 679

                                                  
Query: 121 actgcttaattagccgctgccgccgagcacggacttgag 159
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 678 actgcttaattagccgctgccgccgagcacggacttgag 640
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>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose
           pyrophosphatase
          Length = 642

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 130 ttagccgctgccgccgagcacggacttgag 159
           ||||||||||||||||||||||||||||||
Sbjct: 642 ttagccgctgccgccgagcacggacttgag 613
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>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose
           pyrophosphatase (sagppase gene)
          Length = 639

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 130 ttagccgctgccgccgagcacggacttgag 159
           ||||||||||||||||||||||||||||||
Sbjct: 639 ttagccgctgccgccgagcacggacttgag 610
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>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 46.1 bits (23), Expect = 0.031
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1    ggaaattgatatgaaaaattaaa 23
            |||||||||||||||||||||||
Sbjct: 3136 ggaaattgatatgaaaaattaaa 3158
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.031
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 1        ggaaattgatatgaaaaattaaa 23
                |||||||||||||||||||||||
Sbjct: 29518634 ggaaattgatatgaaaaattaaa 29518656
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>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 46.1 bits (23), Expect = 0.031
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1      ggaaattgatatgaaaaattaaa 23
              |||||||||||||||||||||||
Sbjct: 102904 ggaaattgatatgaaaaattaaa 102926
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>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2     gaaattgatatgaaaaattaaa 23
             ||||||||||||||||||||||
Sbjct: 58531 gaaattgatatgaaaaattaaa 58552
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>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence
          Length = 181468

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ggaaattgatatgaaaaatta 21
             |||||||||||||||||||||
Sbjct: 13286 ggaaattgatatgaaaaatta 13266
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>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence
          Length = 236895

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     ggaaattgatatgaaaaatta 21
             |||||||||||||||||||||
Sbjct: 38057 ggaaattgatatgaaaaatta 38077
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 135     cgctgccgccgagcacggacttgag 159
               |||||||||||||||||| ||||||
Sbjct: 7136995 cgctgccgccgagcacggccttgag 7137019
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>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence
          Length = 274705

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttgatatgaaaaattaaaca 25
             ||||||||||||||||||||
Sbjct: 59774 ttgatatgaaaaattaaaca 59793
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>ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, isoform B (LOC520387),
            mRNA
          Length = 3625

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 13   gaaaaattaaacacaacttgaaac 36
            |||||||||||||||| |||||||
Sbjct: 3157 gaaaaattaaacacaaattgaaac 3134
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 133     gccgctgccgccgagcacgg 152
               ||||||||||||||||||||
Sbjct: 2457731 gccgctgccgccgagcacgg 2457712
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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     tgaaaaattaaacacaacttgaaa 35
              ||||||||||||||||| ||||||
Sbjct: 225998 tgaaaaattaaacacaaattgaaa 226021
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>emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chromosome 6 Contains
            part of the gene for a novel protein highly similar to
            FLJ30899, complete sequence
          Length = 65114

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    aattgatatgaaaaattaaa 23
            ||||||||||||||||||||
Sbjct: 1289 aattgatatgaaaaattaaa 1270
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>emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chromosome 6, complete
             sequence
          Length = 81780

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tgaaaaattaaacacaactt 31
             ||||||||||||||||||||
Sbjct: 54905 tgaaaaattaaacacaactt 54886
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aaattgatatgaaaaattaa 22
              ||||||||||||||||||||
Sbjct: 281659 aaattgatatgaaaaattaa 281678
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>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155413

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tgaaaaattaaacacaactt 31
             ||||||||||||||||||||
Sbjct: 18496 tgaaaaattaaacacaactt 18477
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aaattgatatgaaaaattaa 22
              ||||||||||||||||||||
Sbjct: 282959 aaattgatatgaaaaattaa 282978
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>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     tgaaaaattaaacacaactt 31
              ||||||||||||||||||||
Sbjct: 126735 tgaaaaattaaacacaactt 126754
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>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      ttgatatgaaaaattaaaca 25
              ||||||||||||||||||||
Sbjct: 631265 ttgatatgaaaaattaaaca 631284
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>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence
          Length = 195448

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    tgaaaaattaaacacaacttgaa 34
             ||||| |||||||||||||||||
Sbjct: 65173 tgaaatattaaacacaacttgaa 65195
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>gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosome 6, complete sequence
          Length = 222024

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    aaaaattaaacacaacttg 32
             |||||||||||||||||||
Sbjct: 37265 aaaaattaaacacaacttg 37247
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>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease
              (S2-RNase) and S2-locus F-box protein (SLF2) genes,
              complete cds
          Length = 328473

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 17     aattaaacacaacttgaaa 35
              |||||||||||||||||||
Sbjct: 311501 aattaaacacaacttgaaa 311483



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 17     aattaaacacaacttgaaa 35
              |||||||||||||||||||
Sbjct: 292749 aattaaacacaacttgaaa 292731
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 132     agccgctgccgccgagcac 150
               |||||||||||||||||||
Sbjct: 3199296 agccgctgccgccgagcac 3199314
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>gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome 6, complete sequence
          Length = 172240

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    aaaaattaaacacaacttg 32
             |||||||||||||||||||
Sbjct: 78588 aaaaattaaacacaacttg 78606
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>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence
          Length = 206029

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      aaattgatatgaaaaatta 21
              |||||||||||||||||||
Sbjct: 205501 aaattgatatgaaaaatta 205483
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>ref|XM_754052.1| Ustilago maydis 521 hypothetical protein (UM02998.1) partial mRNA
          Length = 4014

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 101 cacgacgacctttgctgag 119
           |||||||||||||||||||
Sbjct: 416 cacgacgacctttgctgag 434
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>gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, complete sequence
          Length = 120644

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaattgatatgaaaaatta 21
             |||||||||||||||||||
Sbjct: 52722 aaattgatatgaaaaatta 52740
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>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence
          Length = 261450

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 2      gaaattgatatgaaaaattaaacacaa 28
              |||| |||| |||||||||||||||||
Sbjct: 232769 gaaagtgatctgaaaaattaaacacaa 232743
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>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence
          Length = 159681

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   cctttgctgagaactgctt 127
             |||||||||||||||||||
Sbjct: 77566 cctttgctgagaactgctt 77584
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>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete
             sequence
          Length = 155524

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    aattaaacacaacttgaaa 35
             |||||||||||||||||||
Sbjct: 36865 aattaaacacaacttgaaa 36883
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>gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, complete sequence
          Length = 164190

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 2     gaaattgatatgaaaaattaaacacaa 28
             ||||||||||| |||||||||| ||||
Sbjct: 75515 gaaattgatatcaaaaattaaaaacaa 75541
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>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     tgatatgaaaaattaaaca 25
             |||||||||||||||||||
Sbjct: 73480 tgatatgaaaaattaaaca 73462
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>gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, complete sequence
          Length = 135955

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaattgatatgaaaaatta 21
             |||||||||||||||||||
Sbjct: 95749 aaattgatatgaaaaatta 95767
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>ref|XM_724139.1| Plasmodium yoelii yoelii str. 17XNL mature parasite-infected
            erythrocyte surface antigen (PY01460) partial mRNA
          Length = 3144

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 9    atatgaaaaattaaacacaacttgaaacaga 39
            ||||||||||| ||||| |||||||| ||||
Sbjct: 1997 atatgaaaaatgaaacaaaacttgaagcaga 2027
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>gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, complete sequence
          Length = 170842

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      aaattgatatgaaaaatta 21
              |||||||||||||||||||
Sbjct: 155995 aaattgatatgaaaaatta 156013
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>gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, complete sequence
          Length = 33234

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaattgatatgaaaaatta 21
             |||||||||||||||||||
Sbjct: 14219 aaattgatatgaaaaatta 14237
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>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence
          Length = 117770

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      aaattgatatgaaaaatta 21
              |||||||||||||||||||
Sbjct: 114815 aaattgatatgaaaaatta 114797
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>emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chromosome 11p12-13,
             complete sequence
          Length = 106073

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 5     attgatatgaaaaattaaacaca 27
             ||||| |||||||||||||||||
Sbjct: 12315 attgaaatgaaaaattaaacaca 12293
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>emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 on chromosome 6q26-27 Contains
             a novel gene, the MAS1 oncogene, the 5' end of the IGF2R
             gene for insulin-like growth factor 2 receptor
             (cation-independent mannose-6 phosphate receptor,
             Insulin-like growth factor-2 receptor (mannose-6-phosphate
             receptor, cation-independent)) (MPRI, CD222, CIMPR, M6P-R)
             and two CpG islands, complete sequence
          Length = 129968

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    gaaaaattaaacacaactt 31
             |||||||||||||||||||
Sbjct: 41605 gaaaaattaaacacaactt 41623
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>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 238669

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   cctttgctgagaactgctt 127
             |||||||||||||||||||
Sbjct: 97514 cctttgctgagaactgctt 97532
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   agccgctgccgccgagcac 150
             |||||||||||||||||||
Sbjct: 86105 agccgctgccgccgagcac 86123
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>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             11/14
          Length = 318050

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   agccgctgccgccgagcac 150
             |||||||||||||||||||
Sbjct: 36658 agccgctgccgccgagcac 36676
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    ccgctgccgccgagcacgg 152
              |||||||||||||||||||
Sbjct: 213856 ccgctgccgccgagcacgg 213838
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>gb|AY293855.1| Homo sapiens insulin-like growth factor 2 receptor (IGF2R) gene,
            complete cds
          Length = 139947

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 13   gaaaaattaaacacaactt 31
            |||||||||||||||||||
Sbjct: 3613 gaaaaattaaacacaactt 3595
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>gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, complete sequence
          Length = 194334

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 133   gccgctgccgccgagcacg 151
             |||||||||||||||||||
Sbjct: 64531 gccgctgccgccgagcacg 64549
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 58      agcgcacgaacacatgcatcaaattaa 84
               |||||||||||||||||| ||| ||||
Sbjct: 4160913 agcgcacgaacacatgcaacaacttaa 4160939
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>gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, complete sequence
          Length = 174138

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      aaattgatatgaaaaatta 21
              |||||||||||||||||||
Sbjct: 154447 aaattgatatgaaaaatta 154465
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>gb|AF069333.2|AF069333 Homo sapiens insulin-like growth factor II receptor (IGF2R) gene,
            partial cds
          Length = 138376

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 13   gaaaaattaaacacaactt 31
            |||||||||||||||||||
Sbjct: 3323 gaaaaattaaacacaactt 3305
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>gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, complete sequence
          Length = 201382

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 2      gaaattgatatgaaaaattaaacacaa 28
              |||| |||| |||||||||||||||||
Sbjct: 194535 gaaagtgatctgaaaaattaaacacaa 194509
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>gb|AF348209.1|AF348209 Homo sapiens IGF2R gene, complete cds
          Length = 137436

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 13   gaaaaattaaacacaactt 31
            |||||||||||||||||||
Sbjct: 2383 gaaaaattaaacacaactt 2365
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>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence
          Length = 96984

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 2     gaaattgatatgaaaaattaaacacaa 28
             |||| |||| |||||||||||||||||
Sbjct: 28682 gaaagtgatctgaaaaattaaacacaa 28708
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 5       attgatatgaaaaattaaa 23
               |||||||||||||||||||
Sbjct: 3778673 attgatatgaaaaattaaa 3778691
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>gb|AC084520.1|CBRG18K16 Caenorhabditis briggsae cosmid G18K16, complete sequence
          Length = 41648

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaattgatatgaaaaatta 21
             |||||||||||||||||||
Sbjct: 33689 aaattgatatgaaaaatta 33707
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>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence
          Length = 150962

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 2     gaaattgatatgaaaaattaaacacaa 28
             |||| |||| |||||||||||||||||
Sbjct: 92387 gaaagtgatctgaaaaattaaacacaa 92361
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>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I,
             complete sequence
          Length = 111222

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    acacatgcatcaaattaaa 85
             |||||||||||||||||||
Sbjct: 79512 acacatgcatcaaattaaa 79530
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>emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, complete sequence
          Length = 152913

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 7     tgatatgaaaaattaaacacaac 29
             |||||||||||| ||||||||||
Sbjct: 48902 tgatatgaaaaactaaacacaac 48924
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>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     attgatatgaaaaattaaa 23
             |||||||||||||||||||
Sbjct: 17785 attgatatgaaaaattaaa 17803
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    gacgacctttgctgagaac 122
              |||||||||||||||||||
Sbjct: 569506 gacgacctttgctgagaac 569524
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>emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, complete sequence
          Length = 159670

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     gaaattgatatgaaaaatt 20
             |||||||||||||||||||
Sbjct: 14221 gaaattgatatgaaaaatt 14203
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>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0050F10
          Length = 151986

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      attgatatgaaaaattaaa 23
              |||||||||||||||||||
Sbjct: 123024 attgatatgaaaaattaaa 123042
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>emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 in linkage group 24,
             complete sequence
          Length = 161275

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     attgatatgaaaaattaaa 23
             |||||||||||||||||||
Sbjct: 35025 attgatatgaaaaattaaa 35043
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>gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, complete sequence
          Length = 140856

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      aaattgatatgaaaaatta 21
              |||||||||||||||||||
Sbjct: 136512 aaattgatatgaaaaatta 136530
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>gb|U58761.2| Caenorhabditis elegans cosmid C01F1, complete sequence
          Length = 39188

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    gaaaaattaaacacaacttgaaa 35
             |||||||||||||||| ||||||
Sbjct: 36345 gaaaaattaaacacaaattgaaa 36367
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>emb|AL929504.9| Zebrafish DNA sequence from clone CH211-155A11 in linkage group 4,
              complete sequence
          Length = 160087

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     acatgcatcaaattaaacc 87
              |||||||||||||||||||
Sbjct: 125058 acatgcatcaaattaaacc 125040
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>emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, complete sequence
          Length = 32458

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aattgatatgaaaaattaa 22
             |||||||||||||||||||
Sbjct: 11138 aattgatatgaaaaattaa 11156
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>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence
          Length = 239743

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      tgatatgaaaaattaaaca 25
              |||||||||||||||||||
Sbjct: 196850 tgatatgaaaaattaaaca 196832
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>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence
          Length = 179494

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 5      attgatatgaaaaattaaacaca 27
              ||||| |||||||||||||||||
Sbjct: 162656 attgaaatgaaaaattaaacaca 162634


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,560,683
Number of Sequences: 3902068
Number of extensions: 1560683
Number of successful extensions: 124826
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124207
Number of HSP's gapped (non-prelim): 618
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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