>GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 precursor|
           (AtGER3) (AtGLP2)
          Length = 211

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -2

Query: 290 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 168
           A+A VAF   +PGLQI  +ALFAN+LPS +VE  TFL DA+
Sbjct: 159 ALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDAE 199

>AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor|
          Length = 209

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 23/41 (56%), Positives = 32/41 (78%)
 Frame = -2

Query: 290 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 168
           A+A  +FS P+PGLQI D+ALF N+LP+ ++ + TFLD AQ
Sbjct: 157 ALAFPSFSSPSPGLQILDFALFKNDLPTELIAQTTFLDAAQ 197

>GL31_ARATH (P94040) Germin-like protein subfamily 3 member 1 precursor|
           (AtGER1) (At-GERM1) (AtGLP1)
          Length = 208

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -2

Query: 296 SAAVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLD 177
           S+A A+V F+  NPGLQI D+ALFAN+LP+ +V   TFLD
Sbjct: 154 SSASAVVTFNSANPGLQILDFALFANSLPTELVVGTTFLD 193

>GLP1_SINAL (P45854) Germin-like protein 1 precursor|
          Length = 211

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -2

Query: 290 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 168
           A+A VAF   +PGLQI  +ALFAN+LPS +VE  TFL D +
Sbjct: 159 ALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDEE 199

>ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor|
          Length = 214

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 22/41 (53%), Positives = 30/41 (73%)
 Frame = -2

Query: 290 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 168
           A+A  +F   +PGLQI D+ALF N+LP+ V+ + TFLD AQ
Sbjct: 162 ALAFASFGSASPGLQILDFALFKNDLPTEVIAQTTFLDAAQ 202

>GLP1_BRANA (P46271) Germin-like protein 1 precursor|
          Length = 207

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = -2

Query: 290 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDA 171
           A ALV FS  +PGLQI D+ALFAN L + +V   TFL  A
Sbjct: 155 AAALVTFSSASPGLQILDFALFANTLSTELVSATTFLPPA 194

>AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor|
          Length = 209

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -2

Query: 290 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 168
           A+A  +FS P+PGLQI D+ALF N+L + ++ + T LD  Q
Sbjct: 157 AIAFPSFSSPSPGLQIVDFALFKNDLATELIAQTTLLDAPQ 197

>TRUB_DESDG (Q30WI7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 309

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 183 EGDLLNHGGWQVVGEERVVSDLEAWVGAAER 275
           EG+ L+   W  V EE VV  ++ W G++E+
Sbjct: 90  EGETLSTADWTHVTEEDVVRAVDLWTGSSEQ 120

>FPG_BRUME (Q8YED2) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 292

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 244 IWRPGLGPLNATSATAAEL 300
           +WRPGL P+ A  + A E+
Sbjct: 195 LWRPGLSPMRAAGSVAGEM 213

>FPG_BRUAB (Q57A83) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 292

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 244 IWRPGLGPLNATSATAAEL 300
           +WRPGL P+ A  + A E+
Sbjct: 195 LWRPGLSPMRAAGSVAGEM 213

>FPG_BRUA2 (Q2YQP8) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 292

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 244 IWRPGLGPLNATSATAAEL 300
           +WRPGL P+ A  + A E+
Sbjct: 195 LWRPGLSPMRAAGSVAGEM 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,480,236
Number of Sequences: 219361
Number of extensions: 364507
Number of successful extensions: 1025
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)