>PSAN_MAIZE (O65107) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N) (Fragment)
          Length = 112

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -1

Query: 274 SDDLEIECEGKEKFKCGSNVFWKW 203
           SDDLEIECEGKEKFKCGSNVFWKW
Sbjct: 89  SDDLEIECEGKEKFKCGSNVFWKW 112

>PSAN_HORVU (P31093) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N)
          Length = 145

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 274 SDDLEIECEGKEKFKCGSNVFWKW 203
           +DDLEIECEGKEKFKCGSNVFWKW
Sbjct: 122 TDDLEIECEGKEKFKCGSNVFWKW 145

>PSAN_ARATH (P49107) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N)
          Length = 171

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 18/24 (75%), Positives = 23/24 (95%)
 Frame = -1

Query: 274 SDDLEIECEGKEKFKCGSNVFWKW 203
           S+D+ +ECEGK+K+KCGSNVFWKW
Sbjct: 148 SEDIALECEGKDKYKCGSNVFWKW 171

>PSAN_VOLCA (Q9SBN5) Photosystem I reaction center subunit N, chloroplast|
           precursor (PSI-N)
          Length = 139

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 274 SDDLEIECEGKEKFKCGS 221
           ++DL+IECEGK+   CGS
Sbjct: 115 AEDLKIECEGKDAKSCGS 132

>YHG3_YEAST (P38756) Protein YHR003C|
          Length = 429

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 19  ACWM*QDICRFPLVQLQVKNRIPLDDKITETMTSQPKHL 135
           A W+   +  +P+ + +VKNR+   D I ET   Q   L
Sbjct: 294 ATWILTKVSGYPMKENEVKNRLKFYDSILETFQKQMARL 332

>LIFR_RAT (O70535) Leukemia inhibitory factor receptor precursor (LIF|
           receptor) (LIF-R) (CD118 antigen)
          Length = 1093

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 238 KFKCGSNVFWKW*SWS 191
           + +C S  FWKW  WS
Sbjct: 504 RVRCSSETFWKWSKWS 519


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,246,816
Number of Sequences: 219361
Number of extensions: 553596
Number of successful extensions: 1176
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)