| Clone Name | rbaet49c11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds Length = 1704 Score = 89.7 bits (45), Expect = 2e-15 Identities = 68/75 (90%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 61 tacaagaaaatgggacaggttcgaccaagactcgacctctcgatcgacgccattacctct 120 |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 1666 tacaagaaaaccggacaggatcgaccaagacacgacctctcgatcgacgccattacc--- 1610 Query: 121 ttattctcatctcct 135 ||||||||||||||| Sbjct: 1609 ttattctcatctcct 1595 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ctgaagtctgaacatcaccgt 61 ||||||||||||||||||||| Sbjct: 1704 ctgaagtctgaacatcaccgt 1684
>emb|AL359834.18| Human DNA sequence from clone RP11-121P12 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 70248 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 acctctttattctcatctcct 135 ||||||||||||||||||||| Sbjct: 4992 acctctttattctcatctcct 4972
>gb|AC133889.9| Mus musculus chromosome 16, clone RP23-380I13, complete sequence Length = 235574 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tctttattctcatctcctat 137 |||||||||||||||||||| Sbjct: 126877 tctttattctcatctcctat 126896
>gb|AC116375.11| Mus musculus chromosome 5, clone RP24-197K18, complete sequence Length = 150306 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 caagaaaatgggacaggtt 81 ||||||||||||||||||| Sbjct: 91106 caagaaaatgggacaggtt 91124
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 tgttctgaagtctgaacat 55 ||||||||||||||||||| Sbjct: 125333 tgttctgaagtctgaacat 125351
>emb|AL391136.10| Human DNA sequence from clone RP11-304C14 on chromosome 10 Contains part of the TLL2 gene for tolloid-like 2, complete sequence Length = 66188 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 aactgttctgaagtctgaa 52 ||||||||||||||||||| Sbjct: 30301 aactgttctgaagtctgaa 30319
>gb|AC140854.4| Botryllus schlosseri clone subsf-371a15, complete sequence Length = 29559 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 aaatgggacaggttcgacc 86 ||||||||||||||||||| Sbjct: 22088 aaatgggacaggttcgacc 22070
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 tgttctgaagtctgaacat 55 ||||||||||||||||||| Sbjct: 21779313 tgttctgaagtctgaacat 21779331 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 993,451 Number of Sequences: 3902068 Number of extensions: 993451 Number of successful extensions: 59045 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59016 Number of HSP's gapped (non-prelim): 28 length of query: 137 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 116 effective length of database: 17,151,101,840 effective search space: 1989527813440 effective search space used: 1989527813440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)