ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet49a06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 253 acgacgcggtccatgagctgcttggcgttgtcgcacccgggcttctcgaggaagaacacg 312 |||||||||||||||||||||||||| ||||||||| | |||||||| |||||||| ||| Sbjct: 17363667 acgacgcggtccatgagctgcttggccttgtcgcactccggcttctccaggaagaagacg 17363608 Query: 313 tgaccctcccc 323 || |||||||| Sbjct: 17363607 tgcccctcccc 17363597 Score = 87.7 bits (44), Expect = 2e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 244 atgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcacccgggcttctcgagg 303 ||||| || ||||||||||||||||||| |||||| ||| ||||| | |||||||| ||| Sbjct: 17373774 atgaacgccacgacgcggtccatgagctccttggccttggcgcactccggcttctccagg 17373715 Query: 304 aagaacacgtgaccctcccc 323 ||||||||||| |||||||| Sbjct: 17373714 aagaacacgtgcccctcccc 17373695 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 236 caccggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcacccgggct 295 ||||||||||||| || |||| ||| ||||||||||||||||| || |||||| | | | Sbjct: 17360617 caccggctatgaacgccacgatgcgatccatgagctgcttggcattctcgcactccgaat 17360558 Query: 296 tctcgaggaagaacacgtgaccctccccatcggacccgtgccacgccgcg 345 || | |||||||||||||| |||||||| || ||| || ||||||||||| Sbjct: 17360557 tccccaggaagaacacgtgcccctccccctccgactcgagccacgccgcg 17360508 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 240 ggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcaccc 290 ||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 17370864 ggctatgaacgccacgacgcggtccatgagctgcttggccttgtcgcaccc 17370814 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 238 ccggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcaccc 290 |||| |||||| || ||||||||||||| |||||||||||| ||||||||||| Sbjct: 17367490 ccggatatgaacgccacgacgcggtccaagagctgcttggccttgtcgcaccc 17367438
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 253 acgacgcggtccatgagctgcttggcgttgtcgcacccgggcttctcgaggaagaacacg 312 |||||||||||||||||||||||||| ||||||||| | |||||||| |||||||| ||| Sbjct: 87580 acgacgcggtccatgagctgcttggccttgtcgcactccggcttctccaggaagaagacg 87521 Query: 313 tgaccctcccc 323 || |||||||| Sbjct: 87520 tgcccctcccc 87510 Score = 87.7 bits (44), Expect = 2e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 244 atgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcacccgggcttctcgagg 303 ||||| || ||||||||||||||||||| |||||| ||| ||||| | |||||||| ||| Sbjct: 97687 atgaacgccacgacgcggtccatgagctccttggccttggcgcactccggcttctccagg 97628 Query: 304 aagaacacgtgaccctcccc 323 ||||||||||| |||||||| Sbjct: 97627 aagaacacgtgcccctcccc 97608 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 236 caccggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcacccgggct 295 ||||||||||||| || |||| ||| ||||||||||||||||| || |||||| | | | Sbjct: 84530 caccggctatgaacgccacgatgcgatccatgagctgcttggcattctcgcactccgaat 84471 Query: 296 tctcgaggaagaacacgtgaccctccccatcggacccgtgccacgccgcg 345 || | |||||||||||||| |||||||| || ||| || ||||||||||| Sbjct: 84470 tccccaggaagaacacgtgcccctccccctccgactcgagccacgccgcg 84421 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 240 ggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcaccc 290 ||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 94777 ggctatgaacgccacgacgcggtccatgagctgcttggccttgtcgcaccc 94727 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 238 ccggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcaccc 290 |||| |||||| || ||||||||||||| |||||||||||| ||||||||||| Sbjct: 91403 ccggatatgaacgccacgacgcggtccaagagctgcttggccttgtcgcaccc 91351
>dbj|AK067180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M19, full insert sequence Length = 1117 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 253 acgacgcggtccatgagctgcttggcgttgtcgcacccgggcttctcgaggaagaacacg 312 |||||||||||||||||||||||||| ||||||||| | |||||||| |||||||| ||| Sbjct: 979 acgacgcggtccatgagctgcttggccttgtcgcactccggcttctccaggaagaagacg 920 Query: 313 tgaccctcccc 323 || |||||||| Sbjct: 919 tgcccctcccc 909
>dbj|AK071569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102G04, full insert sequence Length = 1519 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 236 caccggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcacccgggct 295 ||||||||||||| || |||| ||| ||||||||||||||||| || |||||| | | | Sbjct: 1183 caccggctatgaacgccacgatgcgatccatgagctgcttggcattctcgcactccgaat 1124 Query: 296 tctcgaggaagaacacgtgaccctccccatcggacccgtgccacgccgcg 345 || | |||||||||||||| |||||||| || ||| || ||||||||||| Sbjct: 1123 tccccaggaagaacacgtgcccctccccctccgactcgagccacgccgcg 1074
>dbj|AK070294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050O07, full insert sequence Length = 1333 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 236 caccggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcacccgggct 295 ||||||||||||| || |||| ||| ||||||||||||||||| || |||||| | | | Sbjct: 1180 caccggctatgaacgccacgatgcgatccatgagctgcttggcattctcgcactccgaat 1121 Query: 296 tctcgaggaagaacacgtgaccctccccatcggacccgtgccacgccgcg 345 || | |||||||||||||| |||||||| || ||| || ||||||||||| Sbjct: 1120 tccccaggaagaacacgtgcccctccccctccgactcgagccacgccgcg 1071
>dbj|AK108359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C08, full insert sequence Length = 1059 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 240 ggctatgaaggcgacgacgcggtccatgagctgcttggcgttgtcgcaccc 290 ||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 952 ggctatgaacgccacgacgcggtccatgagctgcttggccttgtcgcaccc 902
>gb|AC151826.8| Monodelphis domestica, clone XX-25F7, complete sequence Length = 152619 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 agaaaacttgaattccatctag 105 |||||||||||||||||||||| Sbjct: 104326 agaaaacttgaattccatctag 104347
>gb|AY769950.1| Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) (F8) gene, complete cds Length = 192029 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tcacctatttattcacaaata 132 ||||||||||||||||||||| Sbjct: 31914 tcacctatttattcacaaata 31894
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tcacctatttattcacaaata 132 ||||||||||||||||||||| Sbjct: 158629 tcacctatttattcacaaata 158649
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 atcacctatttattcacaaat 131 ||||||||||||||||||||| Sbjct: 1002892 atcacctatttattcacaaat 1002872
>emb|BX842564.3| Human DNA sequence from clone CTD-2037E7 on chromosome X Contains part of the F8 gene for coagulation factor VIII, procoagulant component (hemophilia A), complete sequence Length = 71989 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tcacctatttattcacaaata 132 ||||||||||||||||||||| Sbjct: 45724 tcacctatttattcacaaata 45744
>gb|AE014234.1| Streptococcus agalactiae 2603V/R section 44 of 100 of the complete genome Length = 20692 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 atcacctatttattcacaaat 131 ||||||||||||||||||||| Sbjct: 13796 atcacctatttattcacaaat 13776
>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6 Length = 233050 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 atcacctatttattcacaaat 131 ||||||||||||||||||||| Sbjct: 16354 atcacctatttattcacaaat 16334
>gb|AC163771.5| Pan troglodytes BAC clone CH251-57G17 from chromosome unknown, complete sequence Length = 179603 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tcacctatttattcacaaata 132 ||||||||||||||||||||| Sbjct: 929 tcacctatttattcacaaata 909
>emb|AL645722.2|HSA524G17 Homo sapiens chromosome X clone RP11-524G17 map Xq28, complete sequence Length = 189940 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tcacctatttattcacaaata 132 ||||||||||||||||||||| Sbjct: 48232 tcacctatttattcacaaata 48212
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 cggtccatgagctgcttggcg 279 ||||||||||||||||||||| Sbjct: 965041 cggtccatgagctgcttggcg 965021
>ref|XM_476182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 780 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 207 cttctcgaggaagaacacgt 188
>ref|XM_476171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 96 cttctcgaggaagaacacgt 77
>ref|XM_476170.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 207 cttctcgaggaagaacacgt 188
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 25631 cttctcgaggaagaacacgt 25612
>ref|XM_424700.1| PREDICTED: Gallus gallus similar to COUP transcription factor 1 (LOC427108), mRNA Length = 937 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 atgaaggcgacgacgcggtc 263 |||||||||||||||||||| Sbjct: 509 atgaaggcgacgacgcggtc 490
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 177587 cttctcgaggaagaacacgt 177606 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 175086 cttctcgaggaagaacacgt 175105
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 120466 cttctcgaggaagaacacgt 120447 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 7513 cttctcgaggaagaacacgt 7532 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 5012 cttctcgaggaagaacacgt 5031
>emb|AL731856.14| Human DNA sequence from clone RP11-647P3 on chromosome 9, complete sequence Length = 51132 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acatcacctatttattcacaaata 132 ||||||||||| |||||||||||| Sbjct: 32165 acatcacctatatattcacaaata 32188
>gb|AE011665.1| Xanthomonas axonopodis pv. citri str. 306, section 43 of 469 of the complete genome Length = 10257 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 9919 gagctgcttggcgttgtcgc 9938
>gb|AF499777.1| Xanthomonas axonopodis pv. glycines strain 8ra hrp pathogenicity island, complete sequence Length = 29206 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 20787 gagctgcttggcgttgtcgc 20768
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgacgacgcggtccatga 268 |||||||||||||||||||| Sbjct: 661020 ggcgacgacgcggtccatga 661001
>gb|DQ286698.1| Xanthomonas campestris pv. vignicola strain 81-30 HrpE (hrpE) gene, complete cds Length = 282 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 270 gagctgcttggcgttgtcgc 251
>gb|DQ286697.1| Xanthomonas smithii subsp. citri strain 50E HrpE (hrpE) gene, complete cds Length = 282 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 270 gagctgcttggcgttgtcgc 251
>gb|DQ286696.1| Xanthomonas smithii subsp. smithii strain G34 HrpE (hrpE) gene, complete cds Length = 282 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 270 gagctgcttggcgttgtcgc 251
>gb|DQ286695.1| Xanthomonas campestris pv. begoniae strain 077-3382 HrpE (hrpE) gene, complete cds Length = 282 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 270 gagctgcttggcgttgtcgc 251
>gb|DQ286694.1| Xanthomonas campestris pv. vesicatoria strain 56 HrpE (hrpE) gene, complete cds Length = 282 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 270 gagctgcttggcgttgtcgc 251
>gb|DQ286693.1| Xanthomonas campestris pv. glycines strain 202 HrpE (hrpE) gene, complete cds Length = 282 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gagctgcttggcgttgtcgc 286 |||||||||||||||||||| Sbjct: 270 gagctgcttggcgttgtcgc 251
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 7165617 cttctcgaggaagaacacgt 7165598 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 7052664 cttctcgaggaagaacacgt 7052683 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 7050163 cttctcgaggaagaacacgt 7050182
>dbj|AK109427.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C03, full insert sequence Length = 1053 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 274 cttctcgaggaagaacacgt 255
>dbj|AK109415.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E02, full insert sequence Length = 1114 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK119543.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F03, full insert sequence Length = 1131 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK105947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C07, full insert sequence Length = 1111 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 272 cttctcgaggaagaacacgt 253
>dbj|AK104940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-G01, full insert sequence Length = 999 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104575.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A02, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104531.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A12, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104485.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H12, full insert sequence Length = 981 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E05, full insert sequence Length = 1115 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104285.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D05, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104258.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G02, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104216.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B03, full insert sequence Length = 1109 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104178.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E06, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK104171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B01, full insert sequence Length = 1012 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK103934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F06, full insert sequence Length = 1035 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK061473.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E12, full insert sequence Length = 1088 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 274 cttctcgaggaagaacacgt 255
>dbj|AK060149.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D03, full insert sequence Length = 1056 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK060134.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D04, full insert sequence Length = 1131 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256
>dbj|AK059729.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E08, full insert sequence Length = 1336 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctcgaggaagaacacgt 313 |||||||||||||||||||| Sbjct: 275 cttctcgaggaagaacacgt 256 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,581,333 Number of Sequences: 3902068 Number of extensions: 2581333 Number of successful extensions: 43173 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43005 Number of HSP's gapped (non-prelim): 164 length of query: 351 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 329 effective length of database: 17,147,199,772 effective search space: 5641428724988 effective search space used: 5641428724988 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
