ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet48h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC003007.1|HUAC003007 Human Chromosome 16 BAC clone CIT987SK-A-61E3, complete sequence Length = 113916 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 55248 aaaagaaaaagaaaatcacttcta 55225
>gb|AC009124.8| Homo sapiens chromosome 16 clone RP11-489A11, complete sequence Length = 168268 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 99144 aaaagaaaaagaaaatcacttcta 99167
>gb|AC182429.3| Pan troglodytes BAC clone CH251-654H2 from chromosome 16, complete sequence Length = 173460 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 124752 aaaagaaaaagaaaatcacttcta 124729
>gb|AC120780.32| Pan troglodytes clone rp43-22b16, complete sequence Length = 193047 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 100905 aaaagaaaaagaaaatcacttcta 100882
>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence Length = 200594 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 50578 aaaagaaaaagaaaatcacttcta 50601
>gb|AC106788.3| Homo sapiens chromosome 16 clone RP11-368J21, complete sequence Length = 170613 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 136128 aaaagaaaaagaaaatcacttcta 136151
>gb|AC092119.3| Homo sapiens chromosome 16 clone CTD-2649C14, complete sequence Length = 172206 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 49520 aaaagaaaaagaaaatcacttcta 49543
>gb|AC092375.4| Homo sapiens chromosome 16 clone RP11-645C24, complete sequence Length = 173275 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||||||||||| Sbjct: 143268 aaaagaaaaagaaaatcacttcta 143291
>ref|XM_646921.1| Entamoeba histolytica HM-1:IMSS splicing factor 3B subunit 3, putative (136.t00018) partial mRNA Length = 3438 Score = 46.1 bits (23), Expect = 0.068 Identities = 29/31 (93%) Strand = Plus / Plus Query: 36 tttcaagtttcatttgatacaaaagaaaaag 66 |||||| | |||||||||||||||||||||| Sbjct: 919 tttcaattatcatttgatacaaaagaaaaag 949
>ref|XM_725230.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02442) partial mRNA Length = 9570 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tgatacaaaagaaaaagaaaatcactt 76 |||||||||||||||||||||| |||| Sbjct: 8364 tgatacaaaagaaaaagaaaattactt 8390
>gb|AC117567.12| Mus musculus chromosome 16, clone RP24-380O24, complete sequence Length = 195972 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctccttgt 318 |||||||||||||||||||||| Sbjct: 100330 tcatcctccttgtcctccttgt 100309
>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence Length = 206377 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttc 77 |||||||||||||||||||||| Sbjct: 61879 aaaagaaaaagaaaatcacttc 61900
>emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on chromosome 1 Contains the 5' end of the RIT1 gene for Ras-like without CAAX 1, the gene for a novel protein (KIAA0907), the ARHGEF2 gene for rho/rac guanine nucleotide exchange factor (GEF) 2, four novel genes, the SSR2 gene for signal sequence receptor beta (translocon-associated protein beta), the C1orf6 gene for chromosome 1 open reading frame 6, the gene for mitogen-activated protein-binding protein-interacting protein (MAPBPIP), the RAB25 gene for RAB25 (member RAS oncogene family), the 5' end of the LMNA gene for lamin A/C and three CpG islands, complete sequence Length = 205463 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctccttgt 318 |||||||||||||||||||||| Sbjct: 126619 tcatcctccttgtcctccttgt 126598
>emb|AL135917.15| Human DNA sequence from clone RP1-83M4 on chromosome 6 Contains the 3' end of the STX11 gene for syntaxin 11 and a tumor protein, translationally-controlled 1 (TPT1) pseudogene. Contains two CpG islands, complete sequence Length = 104228 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcacttc 77 |||||||||||||||||||||| Sbjct: 43444 aaaagaaaaagaaaatcacttc 43423
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 tgatacaaaagaaaaagaaaa 70 ||||||||||||||||||||| Sbjct: 119160 tgatacaaaagaaaaagaaaa 119180
>gb|AC147922.2| Xenopus tropicalis clone CH216-98P3, complete sequence Length = 171597 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 141123 aaaagaaaaagaaaatcactt 141103
>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete sequence Length = 157998 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctccttg 317 ||||||||||||||||||||| Sbjct: 114830 tcatcctccttgtcctccttg 114810
>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence Length = 190516 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctccttg 317 ||||||||||||||||||||| Sbjct: 58033 tcatcctccttgtcctccttg 58013
>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence Length = 214712 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 56897 aaaagaaaaagaaaatcactt 56917
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 tgatacaaaagaaaaagaaaa 70 ||||||||||||||||||||| Sbjct: 70087 tgatacaaaagaaaaagaaaa 70107
>emb|AL157414.19| Human DNA sequence from clone RP11-560A15 on chromosome 20 Contains two novel genes, the 3' part of the BMP7 for bone morphogenetic protein 7 and a CpG island, complete sequence Length = 124849 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 114588 aaaagaaaaagaaaatcactt 114608
>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43 Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex homolog (Drosophila) (PCNX) pseudogene and the gene for mixed lineage kinase 4 (KIAA1804), complete sequence Length = 118632 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gacatcacacaaacaacacaa 110 ||||||||||||||||||||| Sbjct: 19451 gacatcacacaaacaacacaa 19471
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 gaaaaagaaaatcacttctag 80 ||||||||||||||||||||| Sbjct: 78666 gaaaaagaaaatcacttctag 78686
>emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on chromosome 11 Contains part of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 146735 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tcacacaaacaacacaaagct 114 ||||||||||||||||||||| Sbjct: 82061 tcacacaaacaacacaaagct 82081
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and L27A (Rpl27a) pseudogenes and a CpG island, complete sequence Length = 196857 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 acatcacacaaacaacacaaa 111 ||||||||||||||||||||| Sbjct: 173519 acatcacacaaacaacacaaa 173499
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 gaaaaagaaaatcacttctag 80 ||||||||||||||||||||| Sbjct: 29575977 gaaaaagaaaatcacttctag 29575997
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 acaaaagaaaaagaaaatcac 74 ||||||||||||||||||||| Sbjct: 20867369 acaaaagaaaaagaaaatcac 20867389
>gb|AC020892.7|AC020892 Homo sapiens chromosome 15 clone RP11-313P18 map 15q21.2, complete sequence Length = 186253 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 atacaaaagaaaaagaaaatc 72 ||||||||||||||||||||| Sbjct: 20182 atacaaaagaaaaagaaaatc 20202
>gb|AC009035.9| Homo sapiens chromosome 16 clone RP11-142A12, complete sequence Length = 132296 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 83579 aaaagaaaaagaaaatcactt 83599
>emb|BX088561.9| Zebrafish DNA sequence from clone DKEY-257G8 in linkage group 2, complete sequence Length = 190419 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 59461 aaaagaaaaagaaaatcactt 59441
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 caaaagaaaaagaaaatcact 75 ||||||||||||||||||||| Sbjct: 80050 caaaagaaaaagaaaatcact 80070
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101075 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 acaaaagaaaaagaaaatcac 74 ||||||||||||||||||||| Sbjct: 69096 acaaaagaaaaagaaaatcac 69116
>emb|AL121809.6|CNS01DSK Human chromosome 14 DNA sequence BAC C-3028N15 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 213442 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttctag 80 |||||||||| |||||||||||||| Sbjct: 188687 aaaagaaaaaaaaaatcacttctag 188711
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 acaaaagaaaaagaaaatcac 74 ||||||||||||||||||||| Sbjct: 20793583 acaaaagaaaaagaaaatcac 20793603
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 acaaaagaaaaagaaaatcac 74 ||||||||||||||||||||| Sbjct: 91626 acaaaagaaaaagaaaatcac 91606
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 tgatacaaaagaaaaagaaaa 70 ||||||||||||||||||||| Sbjct: 167719 tgatacaaaagaaaaagaaaa 167699
>emb|AL772223.7| Mouse DNA sequence from clone RP23-372J10 on chromosome 4, complete sequence Length = 211954 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttctag 80 ||||||||||||||| ||||||||| Sbjct: 60284 aaaagaaaaagaaaaacacttctag 60308
>emb|AL121821.7|CNS01DSN Human chromosome 14 DNA sequence BAC C-2298J14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 127539 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 catcctccttgtcctccttgt 318 ||||||||||||||||||||| Sbjct: 35095 catcctccttgtcctccttgt 35075
>dbj|AB074499.1| Oryzias latipes FLJ20038, mdGnRH genes for a hypothetical protein FLJ20038, medaka-type gonadotropin-releasing hormone, complete cds Length = 10365 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 1803 aaaagaaaaagaaaatcactt 1823
>gb|AC160122.2| Mus musculus BAC clone RP23-390G1 from chromosome 13, complete sequence Length = 208856 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcactt 76 ||||||||||||||||||||| Sbjct: 29864 aaaagaaaaagaaaatcactt 29844
>gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosome 12, complete sequence Length = 205080 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 118496 aaaagaaaaagaaaatcact 118515
>ref|XM_636169.1| Dictyostelium discoideum putative CAM kinase (CAMK) (DDB0231454), partial mRNA Length = 4518 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 caagtttcatttgatacaaa 58 |||||||||||||||||||| Sbjct: 3226 caagtttcatttgatacaaa 3245
>gb|AC108852.9| Mus musculus chromosome 3, clone RP24-87H3, complete sequence Length = 220174 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tccttttcatcctccttgtcctcc 314 |||| ||||||||||||||||||| Sbjct: 76039 tcctcttcatcctccttgtcctcc 76016
>gb|AC100381.9| Mus musculus chromosome 3, clone RP23-132C6, complete sequence Length = 190741 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tccttttcatcctccttgtcctcc 314 |||| ||||||||||||||||||| Sbjct: 141680 tcctcttcatcctccttgtcctcc 141657
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 610437 aaaagaaaaagaaaatcact 610418
>gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6, complete sequence Length = 152664 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 66835 aaaagaaaaagaaaatcact 66854
>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence Length = 184523 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gatacaaaagaaaaagaaaa 70 |||||||||||||||||||| Sbjct: 27274 gatacaaaagaaaaagaaaa 27255
>gb|BC052921.1| Mus musculus sterile alpha motif domain containing 10, mRNA (cDNA clone MGC:56770 IMAGE:6311715), complete cds Length = 2208 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 1717 tcatcctccttgtcctcctt 1698
>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence Length = 187090 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 60409 aaaagaaaaagaaaatcact 60428
>ref|NG_005305.1| Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3/GIY-YIG domain containing 1 region (SULT1A3/GIYD1@) on chromosome 16 Length = 152926 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 123871 aaaaaaaaaagaaaatcacttcta 123894
>gb|AC182396.3| Pan troglodytes BAC clone CH251-244D19 from chromosome 16, complete sequence Length = 175231 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 101078 aaaaaaaaaagaaaatcacttcta 101055
>gb|AY570924.1| Sinorhizobium meliloti strain B1 plasmid pSymA NodQ1 (nodQ1) gene, partial cds; and nodQ1-nodJ intergenic region, partial sequence Length = 3971 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ctgaagcggcggcaagactg 178 |||||||||||||||||||| Sbjct: 1120 ctgaagcggcggcaagactg 1139
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 tcatccttttcatcctccttgtcctcct 315 |||||||| ||||||||||| ||||||| Sbjct: 211094 tcatccttctcatcctccttttcctcct 211067
>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence Length = 217116 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 cacacaaacaacacaaagcttcac 118 |||||||||| ||||||||||||| Sbjct: 109826 cacacaaacagcacaaagcttcac 109849
>gb|AC011309.5| Homo sapiens BAC clone CTD-2503O24 from 7, complete sequence Length = 112863 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 27657 aaaagaaaaagaaaatcact 27638
>gb|AC004855.1| Homo sapiens PAC clone RP4-673O11 from 7, complete sequence Length = 74816 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 11587 aaaagaaaaagaaaatcact 11606
>gb|AC127457.3| Homo sapiens chromosome 16 clone RP11-100F10, complete sequence Length = 86390 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 14765 aaaaaaaaaagaaaatcacttcta 14788
>gb|DQ484024.1| Gymnogyps californianus clone 190G microsatellite sequence Length = 768 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tcatccttttcatcctcctt 307 |||||||||||||||||||| Sbjct: 354 tcatccttttcatcctcctt 335
>gb|DQ483941.1| Gymnogyps californianus clone 107G microsatellite sequence Length = 520 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tcatccttttcatcctcctt 307 |||||||||||||||||||| Sbjct: 348 tcatccttttcatcctcctt 329
>gb|DQ483422.1| Gymnogyps californianus clone 125H microsatellite sequence Length = 526 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tcatccttttcatcctcctt 307 |||||||||||||||||||| Sbjct: 354 tcatccttttcatcctcctt 335
>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16, complete sequence Length = 152450 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 75780 aaagaaaaagaaaatcactt 75761
>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete sequence Length = 199938 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 69375 aaaagaaaaagaaaatcact 69356
>gb|AC124692.3| Mus musculus BAC clone RP24-159H19 from chromosome 3, complete sequence Length = 180230 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 128295 aaaagaaaaagaaaatcact 128276
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gatacaaaagaaaaagaaaa 70 |||||||||||||||||||| Sbjct: 175053 gatacaaaagaaaaagaaaa 175034
>gb|AC004850.3| Homo sapiens PAC clone RP4-665C4 from 7, complete sequence Length = 105891 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 acaaaagaaaaagaaaatcacttc 77 |||||| ||||||||||||||||| Sbjct: 81684 acaaaataaaaagaaaatcacttc 81707
>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence Length = 203403 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 acaaaagaaaaagaaaatca 73 |||||||||||||||||||| Sbjct: 42420 acaaaagaaaaagaaaatca 42401
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 cacacaaacaacacaaagcttcac 118 |||||||||| ||||||||||||| Sbjct: 53848 cacacaaacagcacaaagcttcac 53825
>gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, complete sequence Length = 214272 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 141273 aaaagaaaaagaaaatcact 141254
>gb|AC145774.1| Pan troglodytes BAC clone RP43-160F1 from 7, complete sequence Length = 208178 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 172662 aaaagaaaaagaaaatcact 172643
>gb|AC106782.5| Homo sapiens chromosome 16 clone RP11-347C12, complete sequence Length = 181001 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 115945 aaaaaaaaaagaaaatcacttcta 115968
>gb|BC014254.2| Homo sapiens cDNA clone IMAGE:4634739, partial cds Length = 2162 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaatcac 74 ||||||||||||| |||||||||| Sbjct: 1719 gatacaaaagaaacagaaaatcac 1742
>emb|AL589951.6| Human DNA sequence from clone RP11-55F17 on chromosome 13, complete sequence Length = 55627 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gatacaaaagaaaaagaaaa 70 |||||||||||||||||||| Sbjct: 48855 gatacaaaagaaaaagaaaa 48836
>emb|AL356265.10| Human DNA sequence from clone RP13-83C14 on chromosome X Contains a YWHA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein pseudogene and a keratin 8 (KRT8) pseudogene, complete sequence Length = 165609 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 24041 aaaagaaaaagaaaatcact 24060
>emb|AL157774.14| Human DNA sequence from clone RP11-442L12 on chromosome 6 Contains part of the PKHD1 gene for polycystic kidney and hepatic disease 1 (autosomal recessive) (TIG multiple domains-1, FCYT, ARPKD) and a CpG island, complete sequence Length = 154055 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 catcctccttgtcctccttg 317 |||||||||||||||||||| Sbjct: 138534 catcctccttgtcctccttg 138553
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||||||||||||||| ||||||| Sbjct: 17753 aaaagaaaaagaaaatgacttcta 17776
>emb|AL049610.9|HS1055C14 Human DNA sequence from clone RP5-1055C14 on chromosome Xq22.1-22.3 Contains the TCEAL1 gene for transcription elongation factor A (SII)-like 1, a novel gene, a novel pseudogene (LOC139779), the MORF4L2 gene for mortality factor 4 like 2, a novel gene, the 3' end of a gene for the possible ortholog of mouse glycine receptor alpha 4 subunit (GLRA4) and a novel gene (MGC39655), complete sequence Length = 100269 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atacaaaagaaaaagaaaat 71 |||||||||||||||||||| Sbjct: 18176 atacaaaagaaaaagaaaat 18157
>emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16 on chromosome 6q24 Contains GSS, complete sequence Length = 87552 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 29702 aaaagaaaaagaaaatcact 29721
>emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BAC clone F28O9 Length = 85710 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tttgatacaaaagaaaaaga 67 |||||||||||||||||||| Sbjct: 12277 tttgatacaaaagaaaaaga 12296
>emb|AJ242574.1|SME242574 Sinorhizobium meliloti Insertion sequence isrm10-2 strain CE31A Length = 2194 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ctgaagcggcggcaagactg 178 |||||||||||||||||||| Sbjct: 614 ctgaagcggcggcaagactg 633
>gb|AC084053.6| Mus Musculus Strain C57BL6/J chromosome 3 BAC, RP23-158F1, complete sequence Length = 199415 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 152971 aaaagaaaaagaaaatcact 152990
>emb|CR626868.8| Zebrafish DNA sequence from clone DKEY-164P4 in linkage group 14, complete sequence Length = 75430 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 69793 aaagaaaaagaaaatcactt 69812
>gb|AY129465.1| Homo sapiens polycystic kidney and hepatic disease 1 (PKHD1) gene, complete cds, alternatively spliced Length = 469514 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 catcctccttgtcctccttg 317 |||||||||||||||||||| Sbjct: 265266 catcctccttgtcctccttg 265247
>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence Length = 110295 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 26286 aaagaaaaagaaaatcactt 26305
>gb|AC027317.6| Homo sapiens chromosome 5 clone CTC-340P19, complete sequence Length = 112365 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 39994 aaaagaaaaagaaaatcact 40013
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gcggcggcaagactgttcga 183 |||||||||||||||||||| Sbjct: 1084430 gcggcggcaagactgttcga 1084411
>gb|AF334829.1| Homo sapiens mitochondrial RNA-processing endoribonuclease RNA (RMRP) gene, complete sequence Length = 187856 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gatacaaaagaaaaagaaaatcac 74 ||||||||||||| |||||||||| Sbjct: 28005 gatacaaaagaaacagaaaatcac 27982
>dbj|AK094415.1| Homo sapiens cDNA FLJ37096 fis, clone BRACE2018759 Length = 1873 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaatcac 74 ||||||||||||| |||||||||| Sbjct: 1448 gatacaaaagaaacagaaaatcac 1471
>gb|AC097268.10| Pan troglodytes BAC RP43-43O8 (Roswell Park Cancer Institute) complete sequence Length = 241278 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 61386 aaagaaaaagaaaatcactt 61367
>gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromosome 16, complete sequence Length = 194406 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 57449 aaaaaaaaaagaaaatcacttcta 57472
>gb|AC092888.4| Homo sapiens 12 BAC RP11-597C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169071 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atacaaaagaaaaagaaaat 71 |||||||||||||||||||| Sbjct: 91942 atacaaaagaaaaagaaaat 91961
>ref|NM_172676.2| Mus musculus sterile alpha motif domain containing 10 (Samd10), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 1717 tcatcctccttgtcctcctt 1698
>dbj|AK164204.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630049C13 product:hypothetical SAM domain profile/Sterile alpha motif homology containing protein, full insert sequence Length = 2103 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 1757 tcatcctccttgtcctcctt 1738
>dbj|AK171151.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630228D08 product:weakly similar to Hypothetical SAM domain [Mus musculus], full insert sequence Length = 2103 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 1723 tcatcctccttgtcctcctt 1704
>dbj|AK162985.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430024D02 product:unclassifiable, full insert sequence Length = 4045 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gatacaaaagaaaaagaaaa 70 |||||||||||||||||||| Sbjct: 1176 gatacaaaagaaaaagaaaa 1157
>gb|AC009086.6| Homo sapiens chromosome 16 clone RP11-368N21, complete sequence Length = 201155 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 77323 aaaaaaaaaagaaaatcacttcta 77346
>gb|AC027314.5| Homo sapiens chromosome 5 clone CTC-286C20, complete sequence Length = 150668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 147423 aaaagaaaaagaaaatcact 147442
>gb|AC156275.6| Mus musculus 10 BAC RP24-192F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160348 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 tcatccttttcatcctccttgtcctcct 315 |||||||| ||||||||||| ||||||| Sbjct: 61050 tcatccttctcatcctccttttcctcct 61023
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atacaaaagaaaaagaaaat 71 |||||||||||||||||||| Sbjct: 1707499 atacaaaagaaaaagaaaat 1707480
>gb|AC010633.8| Homo sapiens chromosome 5 clone CTD-2317K6, complete sequence Length = 195931 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 acaaaagaaaaagaaaatca 73 |||||||||||||||||||| Sbjct: 49197 acaaaagaaaaagaaaatca 49216
>tpg|BK001427.1| TPA: TPA_exp: Homo sapiens NOELIN1 (OLFM1) gene, complete cds; alternatively spliced Length = 47757 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 288 tcatccttttcatcctccttgtcctcct 315 ||||||| |||||||||||| ||||||| Sbjct: 21864 tcatcctcttcatcctccttttcctcct 21891
>dbj|AK053884.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318E08 product:hypothetical protein, full insert sequence Length = 1681 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 1298 tcatcctccttgtcctcctt 1279
>gb|AC155656.10| Mus musculus 6 BAC RP24-67I3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162118 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aaaaagaaaatcacttctag 80 |||||||||||||||||||| Sbjct: 117589 aaaaagaaaatcacttctag 117608
>dbj|AK053048.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930033N23 product:hypothetical protein, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 1670 tcatcctccttgtcctcctt 1651
>gb|AC139264.2| Homo sapiens chromosome 16 clone RP11-1353E1, complete sequence Length = 231174 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 46918 aaagaaaaagaaaatcactt 46899
>gb|AC093777.4| Homo sapiens BAC clone RP11-166N24 from 4, complete sequence Length = 116938 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 acaaaagaaaaagaaaatca 73 |||||||||||||||||||| Sbjct: 57277 acaaaagaaaaagaaaatca 57296
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 1118909 aaagaaaaagaaaatcactt 1118928
>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence Length = 176316 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 16280 aaaagaaaaagaaaatcact 16261
>gb|AC158650.7| Mus musculus 6 BAC RP23-280O4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193965 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 caaaagaaaaagaaaatcac 74 |||||||||||||||||||| Sbjct: 102182 caaaagaaaaagaaaatcac 102163
>gb|AC147976.3| Pan troglodytes BAC clone CH251-543E22 from chromosome 7, complete sequence Length = 231294 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 20235 aaaagaaaaagaaaatcact 20254
>gb|AC009167.9| Homo sapiens chromosome 16 clone RP11-82O18, complete sequence Length = 193633 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aaagaaaaagaaaatcactt 76 |||||||||||||||||||| Sbjct: 38604 aaagaaaaagaaaatcactt 38623
>gb|AC092287.4| Homo sapiens chromosome 16 clone CTD-2288F12, complete sequence Length = 116478 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 61513 aaaaaaaaaagaaaatcacttcta 61536
>gb|AC092786.3| Homo sapiens BAC clone RP11-116M1 from 2, complete sequence Length = 97984 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 65595 aaaagaaaaagaaaatcact 65576
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete sequence Length = 88643 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 tgatacaaaagaaaaagaaaatca 73 |||||||||||||||| ||||||| Sbjct: 42372 tgatacaaaagaaaaaaaaaatca 42349
>gb|AC016894.11| Homo sapiens BAC clone RP11-17D23 from 2, complete sequence Length = 135160 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttcatcctccttgtcctcct 315 |||||||||||||||||||| Sbjct: 54793 ttcatcctccttgtcctcct 54774
>dbj|AK218993.1| Mus musculus cDNA, clone:Y2G0147A04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060173, based on BLAT search Length = 398 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 361 tcatcctccttgtcctcctt 342
>dbj|AB105684.1| Bovine viral diarrhea virus 1 gene for structural glycoprotein E2, partial cds, isolate: IS26 NCP/01 Length = 420 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 accttctgcgtggtgcagcc 284 |||||||||||||||||||| Sbjct: 101 accttctgcgtggtgcagcc 82
>dbj|AB105683.1| Bovine viral diarrhea virus 1 gene for structural glycoprotein E2, partial cds, isolate: IS25 CP/01 Length = 420 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 accttctgcgtggtgcagcc 284 |||||||||||||||||||| Sbjct: 101 accttctgcgtggtgcagcc 82
>gb|AF143444.1|AF143444 Sinorhizobium meliloti plasmid pSym insertion sequence ISRm10 transposase homolog gene, complete cds Length = 1055 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ctgaagcggcggcaagactg 178 |||||||||||||||||||| Sbjct: 476 ctgaagcggcggcaagactg 495
>gb|AC154439.2| Mus musculus BAC clone RP23-182C9 from 13, complete sequence Length = 198048 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaatcac 74 |||| ||||||||||||||||||| Sbjct: 69669 gataaaaaagaaaaagaaaatcac 69692
>emb|AL844529.10| Mouse DNA sequence from clone RP23-138J20 on chromosome 2, complete sequence Length = 132763 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcatcctccttgtcctcctt 316 |||||||||||||||||||| Sbjct: 34974 tcatcctccttgtcctcctt 34993
>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174933 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 66103 aaaagaaaaagaaaatcact 66122
>dbj|AP000977.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-730K11, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcacttcta 79 |||| ||||||||||||||||||| Sbjct: 138827 aaaaaaaaaagaaaatcacttcta 138804
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete sequence Length = 157729 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 aaacaacacaaagcttcacc 119 |||||||||||||||||||| Sbjct: 12475 aaacaacacaaagcttcacc 12494
>emb|BX284690.3| Mouse DNA sequence from clone RP24-422L8 on chromosome X, complete sequence Length = 87350 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaa 70 |||||||||||||||||||| Sbjct: 20696 gatacaaaagaaaaagaaaa 20715
>emb|AL929471.16| Mouse DNA sequence from clone RP23-289F24 on chromosome 4, complete sequence Length = 146547 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 agaaaaagaaaatcacttct 78 |||||||||||||||||||| Sbjct: 137188 agaaaaagaaaatcacttct 137207
>emb|AL390778.31| Human DNA sequence from clone RP11-399H11 on chromosome 9 Contains the 3' end of the OLFM1 gene for olfactomedin 1, two putative novel transcripts and two CpG islands, complete sequence Length = 221372 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 tcatccttttcatcctccttgtcctcct 315 ||||||| |||||||||||| ||||||| Sbjct: 205490 tcatcctcttcatcctccttttcctcct 205463
>emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chromosome 9p13.1-13.3 Contains the 3' end of the CA9 gene for carbonic anhydrase IX (MN), the TPM2 gene for tropomyosin 2 (beta) (DA1, TMSB, AMCD1), the TLN1 gene for talin 1 (TLN, KIAA1027), the CREB3 gene for cAMP responsive element binding protein 3 (luman) (LZIP, LUMAN, MGC15333, MGC19782), the GBA2 gene for glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054), a novel gene (KIAA0258), five novel genes, the NPR2 gene for natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) (NPRB, ANPRB, GUC2B, NPRBi), the SPAG8 gene for sperm associated antigen 8 (SMP1, BS-84, HSD-1, hSMP-1, MGC26201), the HINT2 gene for Histidine triad nucleotide binding protein 2, the gene for NAG-5 protein (LOC51754), an olfactory receptor pseudogene, the gene for a novel seven transmembrane helix receptor, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5,13kDa (B13, NUFM, UQOR13, FLJ12147, CI-13KD-B) (NDUFA5) pseudogene and six CpG islands, complete sequence Length = 195379 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaatcac 74 ||||||||||||| |||||||||| Sbjct: 83336 gatacaaaagaaacagaaaatcac 83359
>gb|AC145559.4| Mus musculus BAC clone RP23-371A1 from 5, complete sequence Length = 203726 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aaaagaaaaagaaaatcact 75 |||||||||||||||||||| Sbjct: 107419 aaaagaaaaagaaaatcact 107400
>emb|CT025570.7| Mouse DNA sequence from clone RP24-82O4 on chromosome 14, complete sequence Length = 232110 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tgatacaaaagaaaaagaaa 69 |||||||||||||||||||| Sbjct: 132070 tgatacaaaagaaaaagaaa 132089
>emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on chromosome 4, complete sequence Length = 80682 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 tccttttcatcctccttgtcctccttgt 318 ||||| || ||||||||||||||||||| Sbjct: 68018 tccttctcctcctccttgtcctccttgt 67991
>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete sequence Length = 224034 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaa 70 |||||||||||||||||||| Sbjct: 207222 gatacaaaagaaaaagaaaa 207241
>dbj|AB049900.1| Macaca fascicularis brain cDNA, clone:QnpA-19713 Length = 1823 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gatacaaaagaaaaagaaaatcac 74 ||||||||||||| |||||||||| Sbjct: 1328 gatacaaaagaaatagaaaatcac 1351 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,155,752 Number of Sequences: 3902068 Number of extensions: 4155752 Number of successful extensions: 237744 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 236940 Number of HSP's gapped (non-prelim): 804 length of query: 318 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 296 effective length of database: 17,147,199,772 effective search space: 5075571132512 effective search space used: 5075571132512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
