>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +3

Query: 114 HPYV-HDHTHIRCHTHTCS 167
           H Y+ H HTH+  HTHTC+
Sbjct: 53  HSYLLHPHTHVCTHTHTCT 71

>FHL3_MOUSE (Q9R059) Four and a half LIM domains protein 3 (FHL-3) (Skeletal|
           muscle LIM-protein 2) (SLIM 2)
          Length = 289

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -3

Query: 177 EDIHYKCGCGI*CACDHGRKDEFIFYCSVQ*LVCVSTKCTHFIRAC 40
           ED H+  GC   C C     DE  F C    L+C    CT F   C
Sbjct: 57  EDRHFHEGCFRCCRCQRSLADE-PFTCQDSELLCNECYCTAFSSQC 101

>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein|
          Length = 1259

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 114 HPYVHDHTHIRCHTHTCSVYPLVVSP 191
           H + H HTH   H HT + +P  + P
Sbjct: 527 HQHQHQHTHQHTHQHTFTPFPHAIPP 552

>PRDM6_HUMAN (Q9NQX0) PR domain zinc finger protein 6 (PR domain-containing|
           protein 6) (Fragment)
          Length = 608

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 126 HDHTHIRCHTHTCSVYPLVVSP 191
           H HTH   HTH+ +++  VV P
Sbjct: 6   HTHTHTHTHTHSLTLFCAVVKP 27

>BRAC_XENLA (P24781) Brachyury protein (T protein) (xBRA)|
          Length = 432

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +2

Query: 29  SDNKHARMKCVHLVDTHTNYCTEQ*KMNSSLRP*SHAHQMPHPHL*CISSRGLPLISIDE 208
           +DN  A   C+ ++ +H N+ T Q   ++ + P SH+   P P     SS+   L S+  
Sbjct: 303 ADNSSA---CLSMLQSHDNWSTLQMPAHTGMLPMSHSTGTPPP-----SSQYPSLWSVSN 354

Query: 209 RTTLPDFSLGGV 244
               P    GG+
Sbjct: 355 SAITPVSQSGGI 366


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,995,266
Number of Sequences: 219361
Number of extensions: 708362
Number of successful extensions: 1763
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)