ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet48d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
2dbj|AK069456.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 5e-06
4emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 60 5e-06
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
6dbj|AK108385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
7tpe|BN000664.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 54 3e-04
8tpe|BN000660.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 54 3e-04
9tpe|BN000659.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 54 3e-04
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 3e-04
11emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 54 3e-04
12ref|NM_187980.1| Oryza sativa (japonica cultivar-group), Ozsa840... 50 0.005
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
14dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
15dbj|AK102117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
16dbj|AK061583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
17gb|AY105947.1| Zea mays PCO084450 mRNA sequence 50 0.005
18tpe|BN000665.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 50 0.005
19tpe|BN000532.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 50 0.005
20gb|DQ317315.1| Musa acuminata putative peroxidase mRNA, partial cds 48 0.019
21gb|AY206414.1| Ipomoea batatas anionic peroxidase swpb3 mRNA, co... 44 0.30
22gb|BC077547.1| Xenopus laevis glucocorticoid receptor protein, m... 44 0.30
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
24emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
25gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (P... 42 1.2
26gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 42 1.2
27gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
31dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
32dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
33dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
34dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
35tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.2
36tpe|BN000574.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.2
37tpe|BN000557.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.2
38emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
39dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.2
40gb|AY206413.1| Ipomoea batatas anionic peroxidase swpb2 mRNA, co... 40 4.7
41gb|AY206412.1| Ipomoea batatas anionic peroxidase swpb1 mRNA, co... 40 4.7
42gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, com... 40 4.7
43ref|XM_479283.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.7
44gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, co... 40 4.7
45gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, comp... 40 4.7
46ref|XM_949476.1| Theileria annulata strain Ankara ATP-dependent ... 40 4.7
47ref|XM_544291.2| PREDICTED: Canis familiaris hypothetical LOC487... 40 4.7
48gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.7
49gb|AE017159.1| Chlamydophila pneumoniae TW-183, section 3 of 4 o... 40 4.7
50emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chr... 40 4.7
51emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108... 40 4.7
52gb|AY311597.1| Gossypium hirsutum class III peroxidase (pod7) mR... 40 4.7
53gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 40 4.7
54gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 4.7
55dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
56gb|AC096660.1| Homo sapiens BAC clone RP11-46G12 from 2, complet... 40 4.7
57gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 40 4.7
58dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
59dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 40 4.7
60dbj|AK110555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
61ref|NM_211321.1| Eremothecium gossypii AFR419Cp (AFR419C), mRNA 40 4.7
62gb|AY111736.1| Zea mays CL32526_1 mRNA sequence 40 4.7
63tpe|BN000637.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 4.7
64tpe|BN000573.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 4.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                          
Query: 202    tttcttagttgatcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcc 261
              ||||||| || ||||| |||||||||||||||||||  ||| | || ||||||| |||  
Sbjct: 624905 tttcttaattaatccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtg 624846

                                
Query: 262    cgatgtcccccatcttga 279
               |||||||||||||||||
Sbjct: 624845 tgatgtcccccatcttga 624828



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 217    tcctgcagttcttcctgatctgtcc 241
              |||||||||||||||||||||||||
Sbjct: 614834 tcctgcagttcttcctgatctgtcc 614810
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>dbj|AK069456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E08, full
            insert sequence
          Length = 1319

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 202  tttcttagttgatcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcc 261
            ||||||| || ||||| |||||||||||||||||||  ||| | || ||||||| |||  
Sbjct: 1111 tttcttaattaatccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtg 1052

                              
Query: 262  cgatgtcccccatcttga 279
             |||||||||||||||||
Sbjct: 1051 tgatgtcccccatcttga 1034
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                          
Query: 202    tttcttagttgatcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcc 261
              ||||||| || ||||| |||||||||||||||||||  ||| | || ||||||| |||  
Sbjct: 624905 tttcttaattaatccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtg 624846

                                
Query: 262    cgatgtcccccatcttga 279
               |||||||||||||||||
Sbjct: 624845 tgatgtcccccatcttga 624828



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 217    tcctgcagttcttcctgatctgtcc 241
              |||||||||||||||||||||||||
Sbjct: 614834 tcctgcagttcttcctgatctgtcc 614810
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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115859

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                         
Query: 202   tttcttagttgatcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcc 261
             ||||||| || ||||| |||||||||||||||||||  ||| | || ||||||| |||  
Sbjct: 23938 tttcttaattaatccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtg 23997

                               
Query: 262   cgatgtcccccatcttga 279
              |||||||||||||||||
Sbjct: 23998 tgatgtcccccatcttga 24015



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 217   tcctgcagttcttcctgatctgtcc 241
             |||||||||||||||||||||||||
Sbjct: 34009 tcctgcagttcttcctgatctgtcc 34033
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                          
Query: 213    atcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcccgatgtccccc 272
              ||||| |||||||||||||||||||  ||| | || ||||||| |||   ||||||||||
Sbjct: 584397 atccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtgtgatgtccccc 584338

                     
Query: 273    atcttga 279
              |||||||
Sbjct: 584337 atcttga 584331



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 217    tcctgcagttcttcctgatctgtccgctgga 247
              ||||||||||||||||||||||||| |||||
Sbjct: 571861 tcctgcagttcttcctgatctgtccactgga 571831
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>dbj|AK108385.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E11, full
           insert sequence
          Length = 1139

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 217 tcctgcagttcttcctgatctgtccgctgga 247
           ||||||||||||||||||||||||| |||||
Sbjct: 966 tcctgcagttcttcctgatctgtccactgga 936
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>tpe|BN000664.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx135 gene for
            class III peroxidase 135 precursor, exons 1-4
          Length = 2198

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 213  atcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcccgatgtccccc 272
            ||||| |||||||||||||||||||  ||| | || ||||||| |||   ||||||||||
Sbjct: 2191 atccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtgtgatgtccccc 2132

                   
Query: 273  atcttga 279
            |||||||
Sbjct: 2131 atcttga 2125
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>tpe|BN000660.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx131 gene for
            class III peroxidase 131 precursor, exons 1-4
          Length = 1528

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 217  tcctgcagttcttcctgatctgtccgctgga 247
            ||||||||||||||||||||||||| |||||
Sbjct: 1517 tcctgcagttcttcctgatctgtccactgga 1487
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>tpe|BN000659.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx130 gene for
            class III peroxidase 130 precursor, exons 1-4
          Length = 2195

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 213  atcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcccgatgtccccc 272
            ||||| |||||||||||||||||||  ||| | || ||||||| |||   ||||||||||
Sbjct: 2188 atccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtgtgatgtccccc 2129

                   
Query: 273  atcttga 279
            |||||||
Sbjct: 2128 atcttga 2122
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                          
Query: 213    atcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcccgatgtccccc 272
              ||||| |||||||||||||||||||  ||| | || ||||||| |||   ||||||||||
Sbjct: 584397 atccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtgtgatgtccccc 584338

                     
Query: 273    atcttga 279
              |||||||
Sbjct: 584337 atcttga 584331



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 217    tcctgcagttcttcctgatctgtccgctgga 247
              ||||||||||||||||||||||||| |||||
Sbjct: 571861 tcctgcagttcttcctgatctgtccactgga 571831
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 217    tcctgcagttcttcctgatctgtccgctgga 247
              ||||||||||||||||||||||||| |||||
Sbjct: 171111 tcctgcagttcttcctgatctgtccactgga 171141



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                          
Query: 213    atcctcctgcagttcttcctgatctgtccgctggaccccgtcagcggcccgatgtccccc 272
              ||||| |||||||||||||||||||  ||| | || ||||||| |||   ||||||||||
Sbjct: 158575 atccttctgcagttcttcctgatctccccgtttgatcccgtcaacggtgtgatgtccccc 158634

                     
Query: 273    atcttga 279
              |||||||
Sbjct: 158635 atcttga 158641
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>ref|NM_187980.1| Oryza sativa (japonica cultivar-group), Ozsa8400 predicted mRNA
          Length = 1008

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 209 gttgatcctcctgcagttcttcctgatct 237
           ||||| |||||||||||||||||||||||
Sbjct: 993 gttgagcctcctgcagttcttcctgatct 965
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 209     gttgatcctcctgcagttcttcctgatct 237
               ||||| |||||||||||||||||||||||
Sbjct: 8918779 gttgagcctcctgcagttcttcctgatct 8918751
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>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 209   gttgatcctcctgcagttcttcctgatct 237
             ||||| |||||||||||||||||||||||
Sbjct: 26534 gttgagcctcctgcagttcttcctgatct 26506
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>dbj|AK102117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084K24, full
            insert sequence
          Length = 1290

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| |||||||||||||||||||||||
Sbjct: 1101 gttgagcctcctgcagttcttcctgatct 1073
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>dbj|AK061583.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A08, full
            insert sequence
          Length = 1289

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| |||||||||||||||||||||||
Sbjct: 1100 gttgagcctcctgcagttcttcctgatct 1072
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>gb|AY105947.1| Zea mays PCO084450 mRNA sequence
          Length = 1275

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| |||||||||||||||||||||||
Sbjct: 1054 gttgagcctcctgcagttcttcctgatct 1026
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>tpe|BN000665.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx136 gene for
            class III peroxidase 136 precursor, exons 1-4
          Length = 1530

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 217  tcctgcagttcttcctgatctgtcc 241
            |||||||||||||||||||||||||
Sbjct: 1519 tcctgcagttcttcctgatctgtcc 1495
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>tpe|BN000532.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx3 gene for
            class III peroxidase 3 precursor, exons 1-4
          Length = 1932

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| |||||||||||||||||||||||
Sbjct: 1917 gttgagcctcctgcagttcttcctgatct 1889
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>gb|DQ317315.1| Musa acuminata putative peroxidase mRNA, partial cds
          Length = 536

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 264 atgtcccccatcttgaccatccccaccacgaagtccttgaagaa 307
           |||| ||||||||| |||||  ||||||||||||| ||||||||
Sbjct: 152 atgttccccatcttcaccatggccaccacgaagtcgttgaagaa 109
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>gb|AY206414.1| Ipomoea batatas anionic peroxidase swpb3 mRNA, complete cds
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 216  ctcctgcagttcttcctgatct 237
            ||||||||||||||||||||||
Sbjct: 1000 ctcctgcagttcttcctgatct 979
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>gb|BC077547.1| Xenopus laevis glucocorticoid receptor protein, mRNA (cDNA clone
            MGC:83461 IMAGE:3404796), complete cds
          Length = 3392

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 145  ggattgtgctgcatttctaggg 166
            ||||||||||||||||||||||
Sbjct: 2925 ggattgtgctgcatttctaggg 2904
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 218      cctgcagttcttcctgatctg 238
                |||||||||||||||||||||
Sbjct: 14309076 cctgcagttcttcctgatctg 14309056



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 218      cctgcagttcttcctgatct 237
                ||||||||||||||||||||
Sbjct: 14294662 cctgcagttcttcctgatct 14294643
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 209   gttgatcctcctgcagttcttcctgatct 237
             ||||| ||||||||||||| |||||||||
Sbjct: 67622 gttgaccctcctgcagttcatcctgatct 67594
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>gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (Px1) mRNA, partial
           cds
          Length = 957

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 227 cttcctgatctgtccgctggaccccgtcagcggcccgatgtcccccatcttgaccat 283
           |||||||||||||||  ||||||| ||||| ||   |||||  ||||||||||||||
Sbjct: 771 cttcctgatctgtcccttggaccctgtcagtggggtgatgttgcccatcttgaccat 715
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   cctgcagttcttcctgatctg 238
             |||||||||||||||||||||
Sbjct: 58305 cctgcagttcttcctgatctg 58285



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cctgcagttcttcctgatct 237
             ||||||||||||||||||||
Sbjct: 43891 cctgcagttcttcctgatct 43872
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>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    cctgcagttcttcctgatctg 238
              |||||||||||||||||||||
Sbjct: 120464 cctgcagttcttcctgatctg 120444



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    cctgcagttcttcctgatct 237
              ||||||||||||||||||||
Sbjct: 106050 cctgcagttcttcctgatct 106031
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 209      gttgatcctcctgcagttcttcctgatct 237
                ||||| ||||||||||||| |||||||||
Sbjct: 20964390 gttgaccctcctgcagttcatcctgatct 20964362
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 218      cctgcagttcttcctgatctg 238
                |||||||||||||||||||||
Sbjct: 14304051 cctgcagttcttcctgatctg 14304031



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 218      cctgcagttcttcctgatct 237
                ||||||||||||||||||||
Sbjct: 14289637 cctgcagttcttcctgatct 14289618
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 218     cctgcagttcttcctgatctg 238
               |||||||||||||||||||||
Sbjct: 7960065 cctgcagttcttcctgatctg 7960045
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>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0082C09
          Length = 160665

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   cctgcagttcttcctgatctg 238
             |||||||||||||||||||||
Sbjct: 83480 cctgcagttcttcctgatctg 83460
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>dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B13, full
            insert sequence
          Length = 1422

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  cctgcagttcttcctgatctg 238
            |||||||||||||||||||||
Sbjct: 1109 cctgcagttcttcctgatctg 1089
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>dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B12, full
            insert sequence
          Length = 1422

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  cctgcagttcttcctgatctg 238
            |||||||||||||||||||||
Sbjct: 1109 cctgcagttcttcctgatctg 1089
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>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full
            insert sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| ||||||||||||| |||||||||
Sbjct: 1111 gttgaccctcctgcagttcatcctgatct 1083
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>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for
            class III peroxidase 54 precursor, exon 1
          Length = 1038

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| ||||||||||||| |||||||||
Sbjct: 1029 gttgaccctcctgcagttcatcctgatct 1001
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>tpe|BN000574.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx45 gene for
            class III peroxidase 45 precursor, exons 1-2
          Length = 1091

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  cctgcagttcttcctgatctg 238
            |||||||||||||||||||||
Sbjct: 1076 cctgcagttcttcctgatctg 1056
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>tpe|BN000557.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx28 gene for
            class III peroxidase 28 precursor, exons 1-3
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  cctgcagttcttcctgatctg 238
            |||||||||||||||||||||
Sbjct: 1185 cctgcagttcttcctgatctg 1165
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>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04,
            complete sequence
          Length = 140890

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  gttgatcctcctgcagttcttcctgatct 237
            ||||| ||||||||||||| |||||||||
Sbjct: 9796 gttgaccctcctgcagttcatcctgatct 9768
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 329     ctgccggaccagcgcgttggc 349
               |||||||||||||||||||||
Sbjct: 1197381 ctgccggaccagcgcgttggc 1197361
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>gb|AY206413.1| Ipomoea batatas anionic peroxidase swpb2 mRNA, complete cds
          Length = 1263

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 208  agttgatcctcctgcagttcttcctgat 235
            |||||||| ||||||| |||||||||||
Sbjct: 1066 agttgatcttcctgcaattcttcctgat 1039
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>gb|AY206412.1| Ipomoea batatas anionic peroxidase swpb1 mRNA, complete cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 208  agttgatcctcctgcagttcttcctgat 235
            |||||||| ||||||| |||||||||||
Sbjct: 1053 agttgatcttcctgcaattcttcctgat 1026
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>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence
          Length = 196086

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    tctgcgctcaaaggggagga 198
              ||||||||||||||||||||
Sbjct: 183770 tctgcgctcaaaggggagga 183789
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>ref|XM_479283.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  cctgcagttcttcctgatct 237
            ||||||||||||||||||||
Sbjct: 1023 cctgcagttcttcctgatct 1004
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>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence
          Length = 239758

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   tctgcgctcaaaggggagga 198
             ||||||||||||||||||||
Sbjct: 75289 tctgcgctcaaaggggagga 75270
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>gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, complete sequence
          Length = 174783

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    tctgcgctcaaaggggagga 198
              ||||||||||||||||||||
Sbjct: 119368 tctgcgctcaaaggggagga 119349
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>ref|XM_949476.1| Theileria annulata strain Ankara ATP-dependent RNA helicase (TA19090)
            partial mRNA
          Length = 1932

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 220  tgcagttcttcctgatctgt 239
            ||||||||||||||||||||
Sbjct: 1518 tgcagttcttcctgatctgt 1499
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>ref|XM_544291.2| PREDICTED: Canis familiaris hypothetical LOC487163 (LOC487163), mRNA
          Length = 1517

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  atcctcctgcagttcttcct 232
            ||||||||||||||||||||
Sbjct: 1065 atcctcctgcagttcttcct 1084
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 288     accacgaagtccttgaagaa 307
               ||||||||||||||||||||
Sbjct: 2453139 accacgaagtccttgaagaa 2453158
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>gb|AE017159.1| Chlamydophila pneumoniae TW-183, section 3 of 4 of the complete genome
          Length = 300066

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 288    accacgaagtccttgaagaatgagctct 315
              |||||||||||||||| ||| |||||||
Sbjct: 103125 accacgaagtccttgaggaaggagctct 103152
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>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the
             3' end of a novel gene, a guanidinoacetate
             N-methyltransferase (GAMT) pseudogene and a CpG island,
             complete sequence
          Length = 164345

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tcaaaggggaggatcttttc 205
             ||||||||||||||||||||
Sbjct: 76358 tcaaaggggaggatcttttc 76377
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>emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108D11 on chromosome 20q12-13.11
              Contains the 3' end of the JPH2 gene for junctophilin 2
              (JP2, JP-2), the 3' end of the C20orf100 gene for a novel
              HMG (high mobility group) box protein similar to KIAA0737,
              KIAA0808 and TNRC9 (CAGF9) and two CpG islands, complete
              sequence
          Length = 152209

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    gctcaaaggggaggatcttt 203
              ||||||||||||||||||||
Sbjct: 118628 gctcaaaggggaggatcttt 118609
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>gb|AY311597.1| Gossypium hirsutum class III peroxidase (pod7) mRNA, complete cds
          Length = 1282

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  ttagttgatcctcctgcagttcttcctgatct 237
            |||||| | ||| |||||||||||||||||||
Sbjct: 1023 ttagttcacccttctgcagttcttcctgatct 992
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>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 288    accacgaagtccttgaagaatgagctct 315
              |||||||||||||||| ||| |||||||
Sbjct: 134599 accacgaagtccttgaggaaggagctct 134572
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     cgcgatcaaacacatcccga 136
               ||||||||||||||||||||
Sbjct: 1187629 cgcgatcaaacacatcccga 1187610
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 218      cctgcagttcttcctgatct 237
                ||||||||||||||||||||
Sbjct: 26563667 cctgcagttcttcctgatct 26563686



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 218      cctgcagttcttcctgatct 237
                ||||||||||||||||||||
Sbjct: 26563007 cctgcagttcttcctgatct 26562988
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>gb|AC096660.1| Homo sapiens BAC clone RP11-46G12 from 2, complete sequence
          Length = 116814

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tagactggtaggccttttattaac 32
            ||||||||||||| ||||||||||
Sbjct: 4053 tagactggtaggctttttattaac 4030
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>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 288    accacgaagtccttgaagaatgagctct 315
              |||||||||||||||| ||| |||||||
Sbjct: 706986 accacgaagtccttgaggaaggagctct 707013
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    cctgcagttcttcctgatct 237
              ||||||||||||||||||||
Sbjct: 108938 cctgcagttcttcctgatct 108957



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    cctgcagttcttcctgatct 237
              ||||||||||||||||||||
Sbjct: 108278 cctgcagttcttcctgatct 108259
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>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 288    accacgaagtccttgaagaatgagctct 315
              |||||||||||||||| ||| |||||||
Sbjct: 706307 accacgaagtccttgaggaaggagctct 706334
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>dbj|AK110555.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C06, full
            insert sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  cctgcagttcttcctgatct 237
            ||||||||||||||||||||
Sbjct: 1096 cctgcagttcttcctgatct 1077
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>ref|NM_211321.1| Eremothecium gossypii AFR419Cp (AFR419C), mRNA
          Length = 1368

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 cgcgatcaaacacatcccga 136
           ||||||||||||||||||||
Sbjct: 696 cgcgatcaaacacatcccga 715
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>gb|AY111736.1| Zea mays CL32526_1 mRNA sequence
          Length = 820

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 cctgcagttcttcctgatctgtcc 241
           ||||||||||||||||| ||||||
Sbjct: 503 cctgcagttcttcctgacctgtcc 480
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>tpe|BN000637.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx108 gene for
            class III peroxidase 108 precursor, exon 1
          Length = 1035

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  cctgcagttcttcctgatct 237
            ||||||||||||||||||||
Sbjct: 1023 cctgcagttcttcctgatct 1004
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>tpe|BN000573.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx44 gene for
            class III peroxidase 44 precursor, exons 1-2
          Length = 1761

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  cctgcagttcttcctgatct 237
            ||||||||||||||||||||
Sbjct: 1749 cctgcagttcttcctgatct 1730


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,708,841
Number of Sequences: 3902068
Number of extensions: 2708841
Number of successful extensions: 44212
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43945
Number of HSP's gapped (non-prelim): 267
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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