>ref|XM_478781.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1607

 Score =  155 bits (78), Expect = 8e-35
 Identities = 136/154 (88%), Gaps = 1/154 (0%)
 Strand = Plus / Minus

                                                                        
Query: 112  ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 170
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 1474 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 1415

                                                                        
Query: 171  ggagcctttcctcaaaaggaccttttgtcggatccttctcctccgataaaagggcctgca 230
            | ||||| |||||   ||||   |||   ||||| |||||||| || |||||||||||||
Sbjct: 1414 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 1355

                                              
Query: 231  agtcactcccatttgccaggctgttgaactccac 264
             |||||||||||||||||||||||||||||||||
Sbjct: 1354 ggtcactcccatttgccaggctgttgaactccac 1321

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  155 bits (78), Expect = 8e-35
 Identities = 136/154 (88%), Gaps = 1/154 (0%)
 Strand = Plus / Plus

                                                                            
Query: 112      ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 170
                |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 23034487 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 23034546

                                                                            
Query: 171      ggagcctttcctcaaaaggaccttttgtcggatccttctcctccgataaaagggcctgca 230
                | ||||| |||||   ||||   |||   ||||| |||||||| || |||||||||||||
Sbjct: 23034547 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 23034606

                                                  
Query: 231      agtcactcccatttgccaggctgttgaactccac 264
                 |||||||||||||||||||||||||||||||||
Sbjct: 23034607 ggtcactcccatttgccaggctgttgaactccac 23034640

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  155 bits (78), Expect = 8e-35
 Identities = 136/154 (88%), Gaps = 1/154 (0%)
 Strand = Plus / Plus

                                                                          
Query: 112    ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 170
              |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 109701 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 109760

                                                                          
Query: 171    ggagcctttcctcaaaaggaccttttgtcggatccttctcctccgataaaagggcctgca 230
              | ||||| |||||   ||||   |||   ||||| |||||||| || |||||||||||||
Sbjct: 109761 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 109820

                                                
Query: 231    agtcactcccatttgccaggctgttgaactccac 264
               |||||||||||||||||||||||||||||||||
Sbjct: 109821 ggtcactcccatttgccaggctgttgaactccac 109854

>dbj|AK101604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051L15, full
            insert sequence
          Length = 1608

 Score =  155 bits (78), Expect = 8e-35
 Identities = 136/154 (88%), Gaps = 1/154 (0%)
 Strand = Plus / Minus

                                                                        
Query: 112  ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 170
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 1474 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 1415

                                                                        
Query: 171  ggagcctttcctcaaaaggaccttttgtcggatccttctcctccgataaaagggcctgca 230
            | ||||| |||||   ||||   |||   ||||| |||||||| || |||||||||||||
Sbjct: 1414 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 1355

                                              
Query: 231  agtcactcccatttgccaggctgttgaactccac 264
             |||||||||||||||||||||||||||||||||
Sbjct: 1354 ggtcactcccatttgccaggctgttgaactccac 1321

>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 233  tcactcccatttgccaggctgttgaactc 261
            ||||| |||||||||||||||||||||||
Sbjct: 5565 tcactgccatttgccaggctgttgaactc 5593

>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence
          Length = 188476

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 23     atgattcttctgttgttctgc 43
              |||||||||||||||||||||
Sbjct: 173743 atgattcttctgttgttctgc 173763

>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence
          Length = 127540

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atatatgattcttctgttgtt 39
             |||||||||||||||||||||
Sbjct: 55577 atatatgattcttctgttgtt 55597

>gb|AC091691.7| Homo sapiens chromosome 18, clone RP11-47G4, complete sequence
          Length = 164314

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 35    ttgttctgcgtcagtacaaaaattgaaac 63
             ||||||||| ||| |||||||||||||||
Sbjct: 98631 ttgttctgcctcaatacaaaaattgaaac 98659

>gb|AC087319.14| Homo sapiens 12p BAC RP11-229F13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158004

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     gtcagtacaaaaattgaaaca 64
              |||||||||||||||||||||
Sbjct: 113241 gtcagtacaaaaattgaaaca 113261

>ref|XM_512426.1| PREDICTED: Pan troglodytes similar to neuronal calcium channel alpha
            1A subunit isoform 1A-2 (LOC455766), mRNA
          Length = 4623

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   tgattcttctgttgttctgc 43
            ||||||||||||||||||||
Sbjct: 2951 tgattcttctgttgttctgc 2932

>ref|XM_469417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1717

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  gccaggctgttgaactccac 264
            ||||||||||||||||||||
Sbjct: 1421 gccaggctgttgaactccac 1402

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gccaggctgttgaactccac 264
             ||||||||||||||||||||
Sbjct: 92083 gccaggctgttgaactccac 92102

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 245      gccaggctgttgaactccac 264
                ||||||||||||||||||||
Sbjct: 27847953 gccaggctgttgaactccac 27847972

>gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence
          Length = 163604

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   ttgtggttgaagcatcactctttt 154
             |||||||||||||||| |||||||
Sbjct: 33911 ttgtggttgaagcatccctctttt 33888

>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence
          Length = 130740

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    atatatgattcttctgttgt 38
             ||||||||||||||||||||
Sbjct: 55915 atatatgattcttctgttgt 55934

>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence
          Length = 128352

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     atatatgattcttctgttgt 38
              ||||||||||||||||||||
Sbjct: 108871 atatatgattcttctgttgt 108890

>gb|AY339621.1| Equus caballus pulmonary surfactant-associated protein B (SFTPB)
           mRNA, partial cds
          Length = 965

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 cctttcctcaaaaggacctt 194
           ||||||||||||||||||||
Sbjct: 731 cctttcctcaaaaggacctt 750

>gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosome 16, complete
             sequence
          Length = 172362

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    agtacaaaaattgaaacatg 66
             ||||||||||||||||||||
Sbjct: 59218 agtacaaaaattgaaacatg 59199

>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17,
            complete sequence
          Length = 193986

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    ctttaaaatttgaccaacat 20
            ||||||||||||||||||||
Sbjct: 4179 ctttaaaatttgaccaacat 4160

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 245      gccaggctgttgaactccac 264
                ||||||||||||||||||||
Sbjct: 27939277 gccaggctgttgaactccac 27939296

>dbj|AK120078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011B03, full
            insert sequence
          Length = 2855

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  gccaggctgttgaactccac 264
            ||||||||||||||||||||
Sbjct: 2447 gccaggctgttgaactccac 2428

>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence
          Length = 40146

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  tgtcggatccttctcctccg 215
            ||||||||||||||||||||
Sbjct: 9743 tgtcggatccttctcctccg 9762

>emb|CR749752.5| Zebrafish DNA sequence from clone DKEY-228A15 in linkage group 19,
             complete sequence
          Length = 58248

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    aacatatatgattcttctgt 35
             ||||||||||||||||||||
Sbjct: 13014 aacatatatgattcttctgt 12995



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   aacatatatgattcttctgt 35
            ||||||||||||||||||||
Sbjct: 4244 aacatatatgattcttctgt 4225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,712,666
Number of Sequences: 3902068
Number of extensions: 2712666
Number of successful extensions: 45187
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45098
Number of HSP's gapped (non-prelim): 85
length of query: 267
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 245
effective length of database: 17,147,199,772
effective search space: 4201063944140
effective search space used: 4201063944140
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)