ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet47f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 90 1e-15
2gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complet... 46 0.019
3emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chro... 42 0.29
4emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on ch... 42 0.29
5gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosom... 40 1.1
6gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome ... 40 1.1
7gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, co... 40 1.1
8emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in ... 40 1.1
9gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosom... 40 1.1
10emb|AL807791.8| Mouse DNA sequence from clone RP23-319K12 on chr... 40 1.1
11gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4... 38 4.5
12gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
13gb|AC101778.9| Mus musculus chromosome 1, clone RP24-125B8, comp... 38 4.5
14gb|AC150879.3| Bos taurus BAC CH240-491H11 (Children's Hospital... 38 4.5
15gb|AC084326.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 38 4.5
16gb|AC132458.3| Mus musculus BAC clone RP23-152C8 from chromosome... 38 4.5
17emb|CR933521.6| Zebrafish DNA sequence from clone CH211-202P8 in... 38 4.5
18gb|AC122032.4| Mus musculus BAC clone RP24-402M18 from chromosom... 38 4.5
19gb|AC161594.3| Mus musculus BAC clone RP24-153G11 from chromosom... 38 4.5
20emb|AL513527.9| Human DNA sequence from clone RP11-530M23 on chr... 38 4.5
21emb|AL357059.13| Human DNA sequence from clone RP11-153G5 on chr... 38 4.5
22emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chr... 38 4.5
23emb|AL133383.10| Human DNA sequence from clone GS1-204I12 on chr... 38 4.5
24emb|Z49811.1|SPAC5H10 S.pombe chromosome I cosmid c5H10 38 4.5
25emb|AL672217.6| Zebrafish DNA sequence from clone BUSM1-72B14 Co... 38 4.5
26emb|AL833078.2|HSM804389 Homo sapiens genomic DNA; cDNA DKFZp451... 38 4.5
27emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 i... 38 4.5
28gb|AC090615.9| Homo sapiens chromosome 17, clone RP11-578C11, co... 38 4.5
29gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, c... 38 4.5
30gb|DQ378280.1| Drosophila virilis strain Tucson 15010-1001.10 fo... 38 4.5
31gb|AC091912.3| Homo sapiens chromosome 5 clone RP11-215I16, comp... 38 4.5
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
34gb|AC026254.9| Homo sapiens chromosome 17, clone RP11-173M1, com... 38 4.5
35gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, com... 38 4.5
36emb|BX323038.3| Zebrafish DNA sequence from clone DKEYP-57D7 in ... 38 4.5
37dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
38dbj|AK072661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.5
39emb|BX005358.16| Zebrafish DNA sequence from clone DKEY-161F12 i... 38 4.5
40emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13,... 38 4.5
41gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, comp... 38 4.5
42emb|CT573436.2| Pan troglodytes chromosome X clone PTB-077F20 ma... 38 4.5
43gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 38 4.5
44dbj|AP006307.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 38 4.5
45dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 38 4.5
46emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in... 38 4.5
47emb|AL683816.6| Mouse DNA sequence from clone RP23-120E8 on chro... 38 4.5
48emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on ch... 38 4.5
49gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer ... 38 4.5
50dbj|AP000074.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 38 4.5 
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 88/102 (86%), Gaps = 4/102 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    tggtccgcttgttgtatattataaatatggcacaggtgttgtatatgtgtgggccgcgct 60
            ||||||||||||||||||| ||||||||  ||| |||||||||||||||| | | | |||
Sbjct: 1474 tggtccgcttgttgtatataataaatatcacactggtgttgtatatgtgtagccggtgct 1415

                                                      
Query: 61   agaatttacatatgcatatatgctccacaaccaatgctcgta 102
            |||||||||||||||||    ||||||||||| ||| |||||
Sbjct: 1414 agaatttacatatgcat----gctccacaacctatgttcgta 1377



 Score = 63.9 bits (32), Expect = 8e-08
 Identities = 81/97 (83%), Gaps = 4/97 (4%)
 Strand = Plus / Minus

                                                                        
Query: 6    cgcttgttgtatattataaatatggcacaggtgttgtatatgtgtgggccgcgctagaat 65
            |||||| ||||||| ||||||||  || ||||||||||||||||| | | | ||||||||
Sbjct: 5872 cgcttgctgtatataataaatatcacataggtgttgtatatgtgtagtcagtgctagaat 5813

                                                 
Query: 66   ttacatatgcatatatgctccacaaccaatgctcgta 102
            ||||| |||||     ||||||||||||||| |||||
Sbjct: 5812 ttacacatgcac----gctccacaaccaatgttcgta 5780



 Score = 48.1 bits (24), Expect = 0.005
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 1    tggtccgcttgttgtatattataaatatggcacaggtgttgtatatgt 48
            ||||||||||||||||||| |||| |||  |||  |||||||||||||
Sbjct: 4526 tggtccgcttgttgtatataataattatcacaccagtgttgtatatgt 4479
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>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence
          Length = 152251

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 61     agaatttacatatgcatatatgc 83
              |||||||||||||||||||||||
Sbjct: 124176 agaatttacatatgcatatatgc 124198
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>emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chromosome 4, complete
             sequence
          Length = 70508

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    aatttacatatgcatatatgc 83
             |||||||||||||||||||||
Sbjct: 46373 aatttacatatgcatatatgc 46393
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>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete
              sequence
          Length = 228428

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     gaatttacatatgcatatatg 82
              |||||||||||||||||||||
Sbjct: 158744 gaatttacatatgcatatatg 158764
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>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete
             sequence
          Length = 208603

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    atttacatatgcatatatgc 83
             ||||||||||||||||||||
Sbjct: 85767 atttacatatgcatatatgc 85748
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>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence
          Length = 195446

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     atttacatatgcatatatgc 83
              ||||||||||||||||||||
Sbjct: 152904 atttacatatgcatatatgc 152885
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>gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, complete sequence
          Length = 173729

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    tacatatgcatatatgctccacaa 90
             ||||||||||||||| ||||||||
Sbjct: 56450 tacatatgcatatattctccacaa 56427
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>emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in linkage group 14,
             complete sequence
          Length = 181055

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ttacatatgcatatatgctc 85
             ||||||||||||||||||||
Sbjct: 42670 ttacatatgcatatatgctc 42651
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>gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosome 16, complete
             sequence
          Length = 212505

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ttgttgtatattataaatat 28
             ||||||||||||||||||||
Sbjct: 94550 ttgttgtatattataaatat 94569
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>emb|AL807791.8| Mouse DNA sequence from clone RP23-319K12 on chromosome X, complete
             sequence
          Length = 95805

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tgttgtatattataaatatg 29
             ||||||||||||||||||||
Sbjct: 39852 tgttgtatattataaatatg 39833
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>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete
             sequence
          Length = 258658

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    tgttgtatattataaatat 28
             |||||||||||||||||||
Sbjct: 83900 tgttgtatattataaatat 83882
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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
             complete sequence
          Length = 136143

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    gaatttacatatgcatata 80
             |||||||||||||||||||
Sbjct: 90386 gaatttacatatgcatata 90404
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>gb|AC101778.9| Mus musculus chromosome 1, clone RP24-125B8, complete sequence
          Length = 173893

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     aatttacatatgcatatat 81
              |||||||||||||||||||
Sbjct: 165356 aatttacatatgcatatat 165338
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>gb|AC150879.3| Bos taurus  BAC CH240-491H11 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 175314

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 63     aatttacatatgcatatatgctccaca 89
              ||||||||||| ||||||| |||||||
Sbjct: 124349 aatttacatatacatatattctccaca 124323
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>gb|AC084326.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-329J17, complete
            sequence
          Length = 149941

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 64   atttacatatgcatatatg 82
            |||||||||||||||||||
Sbjct: 9934 atttacatatgcatatatg 9916
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>gb|AC132458.3| Mus musculus BAC clone RP23-152C8 from chromosome 5, complete sequence
          Length = 219470

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    gctagaatttacatatgca 76
             |||||||||||||||||||
Sbjct: 34357 gctagaatttacatatgca 34375
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>emb|CR933521.6| Zebrafish DNA sequence from clone CH211-202P8 in linkage group 1,
            complete sequence
          Length = 16667

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   ttgtatattataaatatgg 30
            |||||||||||||||||||
Sbjct: 4944 ttgtatattataaatatgg 4926
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>gb|AC122032.4| Mus musculus BAC clone RP24-402M18 from chromosome 1, complete sequence
          Length = 161153

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     aatttacatatgcatatat 81
              |||||||||||||||||||
Sbjct: 131893 aatttacatatgcatatat 131875
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>gb|AC161594.3| Mus musculus BAC clone RP24-153G11 from chromosome 1, complete sequence
          Length = 180135

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aatttacatatgcatatat 81
             |||||||||||||||||||
Sbjct: 39675 aatttacatatgcatatat 39657
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>emb|AL513527.9| Human DNA sequence from clone RP11-530M23 on chromosome 6 Contains
            part of the LAMA2 gene for laminin, alpha 2 (merosin,
            congenital muscular dystrophy) (LAMM), complete sequence
          Length = 139123

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   ttgtatattataaatatgg 30
            |||||||||||||||||||
Sbjct: 8234 ttgtatattataaatatgg 8216
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>emb|AL357059.13| Human DNA sequence from clone RP11-153G5 on chromosome 10 Contains part
             of a novel gene (KIAA0534), complete sequence
          Length = 74127

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    tgttgtatattataaatat 28
             |||||||||||||||||||
Sbjct: 74028 tgttgtatattataaatat 74010
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>emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chromosome 10 Contains
            part of a novel gene (KIAA0534), complete sequence
          Length = 190361

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   tgttgtatattataaatat 28
            |||||||||||||||||||
Sbjct: 1901 tgttgtatattataaatat 1883
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>emb|AL133383.10| Human DNA sequence from clone GS1-204I12 on chromosome 1 Contains two
             novel genes, complete sequence
          Length = 204158

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aatttacatatgcatatat 81
             |||||||||||||||||||
Sbjct: 71397 aatttacatatgcatatat 71379
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>emb|Z49811.1|SPAC5H10 S.pombe chromosome I cosmid c5H10
          Length = 24845

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   aatttacatatgcatatat 81
            |||||||||||||||||||
Sbjct: 4234 aatttacatatgcatatat 4252
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>emb|AL672217.6| Zebrafish DNA sequence from clone BUSM1-72B14 Contains the gdf8 gene
             for growth differentiation factor 8, a novel gene similar
             to PSML1 (postmeiotic segregation increased 1-like
             protein), two novel genes, the 3' part of a novel gene, a
             novel glycoprotease, a novel gene and two CpG islands,
             complete sequence
          Length = 117322

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    acaggtgttgtatatgtgt 50
             |||||||||||||||||||
Sbjct: 83381 acaggtgttgtatatgtgt 83399
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>emb|AL833078.2|HSM804389 Homo sapiens genomic DNA; cDNA DKFZp451F1719 (from clone
            DKFZp451F1719)
          Length = 4708

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   tgttgtatattataaatat 28
            |||||||||||||||||||
Sbjct: 3961 tgttgtatattataaatat 3943
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>emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 in linkage group 13,
              complete sequence
          Length = 138029

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     acaggtgttgtatatgtgt 50
              |||||||||||||||||||
Sbjct: 119128 acaggtgttgtatatgtgt 119146
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>gb|AC090615.9| Homo sapiens chromosome 17, clone RP11-578C11, complete sequence
          Length = 142895

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    tgttgtatattataaatat 28
             |||||||||||||||||||
Sbjct: 95655 tgttgtatattataaatat 95673
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>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence
          Length = 146364

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aatttacatatgcatatat 81
             |||||||||||||||||||
Sbjct: 35441 aatttacatatgcatatat 35423
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>gb|DQ378280.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 43O10, complete
             sequence
          Length = 40809

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 63    aatttacatatgcatatatgctc 85
             ||||| |||||||||||||||||
Sbjct: 16887 aatttccatatgcatatatgctc 16909
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>gb|AC091912.3| Homo sapiens chromosome 5 clone RP11-215I16, complete sequence
          Length = 149270

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    caggtgttgtatatgtgtg 51
             |||||||||||||||||||
Sbjct: 79145 caggtgttgtatatgtgtg 79127
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 62       gaatttacatatgcatata 80
                |||||||||||||||||||
Sbjct: 17713628 gaatttacatatgcatata 17713646
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 72       atgcatatatgctccacaa 90
                |||||||||||||||||||
Sbjct: 29132374 atgcatatatgctccacaa 29132356
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>gb|AC026254.9| Homo sapiens chromosome 17, clone RP11-173M1, complete sequence
          Length = 154906

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     tgttgtatattataaatat 28
              |||||||||||||||||||
Sbjct: 126110 tgttgtatattataaatat 126092
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>gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, complete sequence
          Length = 166452

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aatttacatatgcatatat 81
             |||||||||||||||||||
Sbjct: 88287 aatttacatatgcatatat 88269
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>emb|BX323038.3| Zebrafish DNA sequence from clone DKEYP-57D7 in linkage group 1,
             complete sequence
          Length = 87548

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    ttgtatattataaatatgg 30
             |||||||||||||||||||
Sbjct: 20862 ttgtatattataaatatgg 20844
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>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0680A05
          Length = 168092

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    atgcatatatgctccacaa 90
             |||||||||||||||||||
Sbjct: 22342 atgcatatatgctccacaa 22324
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>dbj|AK072661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134M13, full
           insert sequence
          Length = 1212

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  atgcatatatgctccacaa 90
           |||||||||||||||||||
Sbjct: 443 atgcatatatgctccacaa 425
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>emb|BX005358.16| Zebrafish DNA sequence from clone DKEY-161F12 in linkage group 20,
              complete sequence
          Length = 181198

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     tgttgtatattataaatat 28
              |||||||||||||||||||
Sbjct: 143095 tgttgtatattataaatat 143113
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>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence
          Length = 121251

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   acaggtgttgtatatgtgt 50
            |||||||||||||||||||
Sbjct: 6541 acaggtgttgtatatgtgt 6559
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>gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, complete sequence
          Length = 236335

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     ttgttgtatattataaata 27
             |||||||||||||||||||
Sbjct: 95777 ttgttgtatattataaata 95795
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>emb|CT573436.2| Pan troglodytes chromosome X clone PTB-077F20 map Xq28, complete sequence
          Length = 189080

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     tgttgtatattataaatat 28
              |||||||||||||||||||
Sbjct: 101698 tgttgtatattataaatat 101680
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>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     atattataaatatggcaca 34
              |||||||||||||||||||
Sbjct: 612370 atattataaatatggcaca 612352
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>dbj|AP006307.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-673J3, complete
              sequence
          Length = 143669

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     aatttacatatgcatatat 81
              |||||||||||||||||||
Sbjct: 142509 aatttacatatgcatatat 142527
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>dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-139F6, complete
             sequence
          Length = 163604

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    aatttacatatgcatatat 81
             |||||||||||||||||||
Sbjct: 10565 aatttacatatgcatatat 10583
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>emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in linkage group 7,
             complete sequence
          Length = 205682

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    gttgtatattataaatatg 29
             |||||||||||||||||||
Sbjct: 27047 gttgtatattataaatatg 27029
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>emb|AL683816.6| Mouse DNA sequence from clone RP23-120E8 on chromosome 4, complete
            sequence
          Length = 216639

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   atttacatatgcatatatg 82
            |||||||||||||||||||
Sbjct: 2632 atttacatatgcatatatg 2650
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>emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on chromosome 4, complete
             sequence
          Length = 173609

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    tgttgtatatgtgtgggcc 55
             |||||||||||||||||||
Sbjct: 17280 tgttgtatatgtgtgggcc 17298
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>gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164480

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     atttacatatgcatatatg 82
              |||||||||||||||||||
Sbjct: 119693 atttacatatgcatatatg 119711
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>dbj|AP000074.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
            section 10/19, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 63   aatttacatatgcatatat 81
            |||||||||||||||||||
Sbjct: 9659 aatttacatatgcatatat 9641


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,323,784
Number of Sequences: 3902068
Number of extensions: 1323784
Number of successful extensions: 112658
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112413
Number of HSP's gapped (non-prelim): 245
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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