| Clone Name | rbaet47d09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome | 40 | 1.1 | 2 | gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... | 40 | 1.1 | 3 | gb|AC006390.8|AC006390 Homo sapiens chromosome 4 clone C0106M04 ... | 38 | 4.4 |
|---|
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcgcaccgttcaccgcgagt 97 |||||||||||||||||||| Sbjct: 1088890 gcgcaccgttcaccgcgagt 1088871
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 ggatccaagcgtcggtgcgcgcga 70 ||||| |||||||||||||||||| Sbjct: 530583 ggatcgaagcgtcggtgcgcgcga 530606
>gb|AC006390.8|AC006390 Homo sapiens chromosome 4 clone C0106M04 map 4p16, complete sequence Length = 183876 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 aaagcattgattccagagt 29 ||||||||||||||||||| Sbjct: 65101 aaagcattgattccagagt 65119 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 458,279 Number of Sequences: 3902068 Number of extensions: 458279 Number of successful extensions: 24828 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24753 Number of HSP's gapped (non-prelim): 75 length of query: 100 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 79 effective length of database: 17,151,101,840 effective search space: 1354937045360 effective search space used: 1354937045360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)