ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet47c11 |
|---|---|
| Clone Library Name | barley_pub |
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 132 bits (332), Expect = 4e-31 Identities = 62/71 (87%), Positives = 66/71 (92%) Frame = -3 Query: 452 FTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAG 273 FTGEQGYPGGKFFDPL L G +G+Y+PDTEKLERLK+AEIKHSRLAMLAMLIFYFEAG Sbjct: 186 FTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAG 245 Query: 272 QGKTPLGALGL 240 QGKTPLGALGL Sbjct: 246 QGKTPLGALGL 256 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -3 Query: 431 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-IFYFEAGQG 267 PG FDPLGLG D L+ + AE+ H R AM A+L IF +A G Sbjct: 76 PGDFGFDPLGLG---------KDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSG 122
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 132 bits (332), Expect = 4e-31 Identities = 62/71 (87%), Positives = 66/71 (92%) Frame = -3 Query: 452 FTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAG 273 FTGEQGYPGGKFFDPL L G +G+Y+PDTEKLERLKVAEIKH+RLAMLAMLIFYFEAG Sbjct: 186 FTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAG 245 Query: 272 QGKTPLGALGL 240 QGKTPLGALGL Sbjct: 246 QGKTPLGALGL 256 Score = 30.4 bits (67), Expect = 2.2 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -3 Query: 431 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-IFYFEAGQG 267 PG FDPLGLG D L+ + AE+ H R AM A+L IF +A G Sbjct: 76 PGDYGFDPLGLG---------KDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSG 122
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 125 bits (314), Expect = 5e-29 Identities = 59/70 (84%), Positives = 64/70 (91%) Frame = -3 Query: 449 TGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQ 270 TGEQGYPGGKFFDPL L G +G+Y PDT+KLERLK+AEIKH+RLAMLAMLIFYFEAGQ Sbjct: 192 TGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQ 251 Query: 269 GKTPLGALGL 240 GKTPLGALGL Sbjct: 252 GKTPLGALGL 261 Score = 31.6 bits (70), Expect = 0.97 Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -3 Query: 431 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-IFYFEAGQG 267 PG FDPLGLG D L+ + AE+ H R AMLA+L IF +A G Sbjct: 81 PGDFGFDPLGLG---------KDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTG 127
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 57.4 bits (137), Expect = 2e-08 Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAG-QGKTP 258 YPGG +FDPLGL D EKL+ LK+AEIKHSRLAM+A LIF +A GK P Sbjct: 218 YPGG-YFDPLGLAA---------DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGP 267 Query: 257 LGAL 246 + L Sbjct: 268 VSFL 271
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 57.0 bits (136), Expect = 2e-08 Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKTP 258 YPGGKFFDPLGL D EK +L++AEIKH+RLAM+A L F + A GK P Sbjct: 217 YPGGKFFDPLGLAA---------DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGP 267 Query: 257 L 255 L Sbjct: 268 L 268
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 52.4 bits (124), Expect = 5e-07 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKTP 258 YPGGKFFDPLGL D K +L++AEIKH+RLAM+ L F + A GK P Sbjct: 214 YPGGKFFDPLGLAS---------DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGP 264 Query: 257 L 255 L Sbjct: 265 L 265
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 48.5 bits (114), Expect = 8e-06 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = -3 Query: 449 TGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA 276 +G+ YPGG F+PLG G D + ++ LK+ EIK+ RLAMLA+L ++ +A Sbjct: 195 SGDPAYPGGPLFNPLGFG---------KDEKSMKELKLKEIKNGRLAMLAILGYFIQA 243
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 47.4 bits (111), Expect = 2e-05 Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = -3 Query: 446 GEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQ 270 G YPGG++FDPLGL D LKV EIK+ RLAM +M F+ +A Sbjct: 184 GNDLYPGGQYFDPLGLA---------DDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 234 Query: 269 GKTPL 255 GK PL Sbjct: 235 GKGPL 239
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 47.0 bits (110), Expect = 2e-05 Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = -3 Query: 446 GEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQ 270 G YPGG++FDPLGL D LKV EIK+ RLAM +M F+ +A Sbjct: 187 GNDLYPGGQYFDPLGLA---------DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 237 Query: 269 GKTPL 255 GK PL Sbjct: 238 GKGPL 242
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 44.3 bits (103), Expect = 1e-04 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = -3 Query: 437 GYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 279 GYPGG +FDPLG G + K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 195 GYPGGLWFDPLGWGSGS--------PAKIKELRTKEIKNGRLAMLAVMGAWFQ 239 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = -3 Query: 431 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAML 303 PG FDPLGLG D E L+ AE+ HSR AML Sbjct: 83 PGDFGFDPLGLGS---------DPESLKWNAQAELVHSRWAML 116
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 44.3 bits (103), Expect = 1e-04 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = -3 Query: 437 GYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 279 GYPGG +FDPLG G + K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 195 GYPGGLWFDPLGWGSGS--------PAKIKELRTKEIKNGRLAMLAVMGAWFQ 239
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 43.5 bits (101), Expect = 2e-04 Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E L LKV E+K+ RLAM +M F+ +A GK P Sbjct: 180 YPGGSF-DPLGLAD---------DPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 229 Query: 257 L 255 L Sbjct: 230 L 230
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 43.1 bits (100), Expect = 3e-04 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG FDPL L E D E+ RLK AEIKH+RLAM++ + +A G+ Sbjct: 212 YPGG-VFDPLKLASE--------DEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGA 262 Query: 257 LGAL 246 LG+L Sbjct: 263 LGSL 266
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 43.1 bits (100), Expect = 3e-04 Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 LGAL 246 L L Sbjct: 241 LDNL 244
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 43.1 bits (100), Expect = 3e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 188 YPGGSF-DPLGLAD---------DAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237 Query: 257 L 255 L Sbjct: 238 L 238
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 40 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 89 Query: 257 L 255 L Sbjct: 90 L 90
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 42.7 bits (99), Expect = 4e-04 Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL + PDT LKV EIK+ RLAM +M F+ +A GK P Sbjct: 192 YPGGSF-DPLGLADD-------PDT--FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241 Query: 257 L 255 L Sbjct: 242 L 242
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 190 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGP 239 Query: 257 L 255 L Sbjct: 240 L 240
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 190 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239 Query: 257 L 255 L Sbjct: 240 L 240
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 190 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239 Query: 257 L 255 L Sbjct: 240 L 240
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 190 YPGGSF-DPLGLA---------TDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239 Query: 257 L 255 L Sbjct: 240 L 240
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 42.7 bits (99), Expect = 4e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 185 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 234 Query: 257 L 255 L Sbjct: 235 L 235
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 42.4 bits (98), Expect = 6e-04 Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E+ LKV E+K+ RLAM +M F+ +A GK P Sbjct: 188 YPGGSF-DPLGLA---------EDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237 Query: 257 L 255 L Sbjct: 238 L 238
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 42.4 bits (98), Expect = 6e-04 Identities = 28/53 (52%), Positives = 31/53 (58%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA 276 YPGG F DPLGL + PDT LKV EIK+ RLAM ML FY +A Sbjct: 46 YPGGPF-DPLGLADD-------PDT--FPELKVKEIKNGRLAMSGMLGFYAQA 88
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 42.4 bits (98), Expect = 6e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K RLAML+M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLAD---------DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 42.4 bits (98), Expect = 6e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 198 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247 Query: 257 L 255 + Sbjct: 248 I 248
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 193 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242 Query: 257 L 255 L Sbjct: 243 L 243
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 186 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 235 Query: 257 L 255 L Sbjct: 236 L 236
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 130 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 179 Query: 257 L 255 L Sbjct: 180 L 180
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 179 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 228 Query: 257 L 255 L Sbjct: 229 L 229
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 187 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236 Query: 257 L 255 L Sbjct: 237 L 237
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 42.0 bits (97), Expect = 7e-04 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 192 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241 Query: 257 L 255 L Sbjct: 242 L 242
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 Y GG F DPLGLG D E+ LKV EIK+ RLAM +M F+ +A GK P Sbjct: 188 YLGGSF-DPLGLGD---------DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237 Query: 257 L 255 + Sbjct: 238 I 238
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 188 YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237 Query: 257 L 255 + Sbjct: 238 I 238
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 161 YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 210 Query: 257 L 255 + Sbjct: 211 I 211
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 41.6 bits (96), Expect = 0.001 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA---GQGK 264 +PGG F DPLGL + + G LKV EIK+ RLAM AML F+ +A G+G Sbjct: 201 HPGGPF-DPLGLAKDPEQGAL---------LKVKEIKNGRLAMFAMLGFFIQAYVTGEGP 250 Query: 263 TPLGALGL*DDF 228 A L D F Sbjct: 251 VENLAKHLSDPF 262
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 + Sbjct: 239 I 239
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 + Sbjct: 239 I 239
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 + Sbjct: 239 I 239
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 + Sbjct: 239 I 239
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 41.2 bits (95), Expect = 0.001 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E L+V EIK+ RLAM +M F+ +A GK P Sbjct: 190 YPGGSF-DPLGLAD---------DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239 Query: 257 L 255 L Sbjct: 240 L 240
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 41.2 bits (95), Expect = 0.001 Identities = 28/61 (45%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E K+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------TDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 + Sbjct: 241 I 241
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV E+K+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------TDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 + Sbjct: 241 I 241
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 40.8 bits (94), Expect = 0.002 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL + PDT LKV E+K+ RLAM +M F+ +A GK P Sbjct: 187 YPGGAF-DPLGLADD-------PDT--FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236 Query: 257 L 255 + Sbjct: 237 I 237
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 40.8 bits (94), Expect = 0.002 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D + LKV EIK+ RLAM +M F+ +A GK P Sbjct: 202 YPGGNF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251 Query: 257 L 255 + Sbjct: 252 I 252
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 40.8 bits (94), Expect = 0.002 Identities = 28/61 (45%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E LKV IK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 257 L 255 L Sbjct: 241 L 241
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/49 (51%), Positives = 29/49 (59%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIF 288 YPGG F DPLG Y D K E LKV EIK+ RLA+LA++ F Sbjct: 168 YPGGAF-DPLG---------YSKDPAKFEELKVKEIKNGRLALLAIVGF 206 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/45 (44%), Positives = 24/45 (53%) Frame = -3 Query: 431 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 PG FD LGLG +P LER K +E+ H R AMLA+ Sbjct: 64 PGDFGFDSLGLGE-------VP--ANLERYKESELIHCRWAMLAV 99
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 40.8 bits (94), Expect = 0.002 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 258 FFDPLGL DG D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 45 FFDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 40.8 bits (94), Expect = 0.002 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 258 FFDPLGL DG D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 45 FFDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 40.4 bits (93), Expect = 0.002 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL + PDT LKV EIK+ RLAM + L F+ +A GK P Sbjct: 177 YPGGPF-DPLGLADD-------PDT--FAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGP 226 Query: 257 L 255 + Sbjct: 227 V 227
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 40.4 bits (93), Expect = 0.002 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D + LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGAF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 + Sbjct: 239 I 239
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 40.4 bits (93), Expect = 0.002 Identities = 28/61 (45%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPL L D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 169 YPGGSF-DPLALAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 218 Query: 257 L 255 L Sbjct: 219 L 219
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/41 (53%), Positives = 27/41 (65%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 FFDPLGL DG D EK +RL+ EIKH R++MLA+ Sbjct: 45 FFDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAV 78
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 40.0 bits (92), Expect = 0.003 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D + LKV E+K+ RLAM +M F+ +A GK P Sbjct: 189 YPGGAF-DPLGLAD---------DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 + Sbjct: 239 I 239
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 39.7 bits (91), Expect = 0.004 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPG + FDPLGL + PDT LKV EIK+ RLAM A L F+ +A GK P Sbjct: 198 YPG-EAFDPLGLADD-------PDT--FAELKVKEIKNGRLAMFACLGFFVQAIVTGKGP 247 Query: 257 L 255 + Sbjct: 248 I 248
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 39.7 bits (91), Expect = 0.004 Identities = 21/42 (50%), Positives = 28/42 (66%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 294 FFDPLGL DG D EK +RL+ E+KH R++MLA++ Sbjct: 45 FFDPLGL---VADG----DQEKFDRLRYVELKHGRISMLAVV 79
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 39.7 bits (91), Expect = 0.004 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D E +KV E+K+ RLAM +M F+ +A GK P Sbjct: 189 YPGGTF-DPLGLAD---------DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 257 L 255 L Sbjct: 239 L 239
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 38.9 bits (89), Expect = 0.006 Identities = 21/41 (51%), Positives = 27/41 (65%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 F+DPLGL DG D EK +RL+ EIKH R++MLA+ Sbjct: 45 FYDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAV 78
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 38.9 bits (89), Expect = 0.006 Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL + LKV EIK+ RLAM +M F+ +A GK P Sbjct: 190 YPGGSF-DPLGLAERP---------QAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239 Query: 257 L 255 L Sbjct: 240 L 240
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 38.9 bits (89), Expect = 0.006 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL D + +KV EIK+ RLAM +M F+ +A GK P Sbjct: 202 YPGGNF-DPLGLAD---------DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251 Query: 257 L 255 + Sbjct: 252 I 252
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 38.9 bits (89), Expect = 0.006 Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPL + D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 48 YPGGSF-DPLAS---------LTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 97 Query: 257 L 255 L Sbjct: 98 L 98
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 38.5 bits (88), Expect = 0.008 Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -3 Query: 431 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 255 PGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 191 PGGAF-DPLGLAD---------DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 240
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 38.5 bits (88), Expect = 0.008 Identities = 21/47 (44%), Positives = 29/47 (61%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 294 Y G + FDP GL + PDT ER+++AE+ H RLAMLA++ Sbjct: 19 YYGDRGFDPAGLAAD-------PDT--FERMRIAEVYHGRLAMLAVV 56 Score = 36.6 bits (83), Expect = 0.030 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 19/106 (17%) Frame = -3 Query: 449 TGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-------- 294 TGE YP + FDPL L D + R++VAE+ H RLAML + Sbjct: 201 TGE--YPADRGFDPLNLAA---------DPDVYARMRVAEVFHGRLAMLCTVGCIVPELL 249 Query: 293 --IFYFEAGQGKTPLG------ALGL*DDFWLARGG---RKGLLHR 189 +FEAG L A+ ++W +GG +KG L R Sbjct: 250 GKGAWFEAGDSVDGLKLGFITMAIAAPTEYWRGQGGFNWQKGELDR 295 Score = 33.9 bits (76), Expect = 0.20 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = -3 Query: 428 GGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 294 G K FDP GL D ER++VAE+ H RL+MLA++ Sbjct: 390 GDKGFDPAGLAA---------DPVTFERMQVAEVFHCRLSMLALV 425 Score = 28.9 bits (63), Expect = 6.3 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -3 Query: 449 TGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAG- 273 T +Q YPG FDPL L E K AEIK+ RLAM M ++ Sbjct: 477 TVDQSYPG---FDPLNL--------------TTEYTKEAEIKNGRLAMNGMFGLEVQSHV 519 Query: 272 QGKTPLGAL 246 GK+P+ L Sbjct: 520 TGKSPINNL 528
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 294 F+DPLGL + D E+ +RL+ EIKH R+AMLA++ Sbjct: 48 FWDPLGLVADA-------DQERFDRLRYVEIKHGRIAMLAVV 82
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 38.1 bits (87), Expect = 0.010 Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 74 YPGDAF-DPLGLAD---------DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 123 Query: 257 L 255 + Sbjct: 124 I 124
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 F+DPLGL + D E+ ERL+ E+KH R+AMLA+ Sbjct: 47 FWDPLGLLADA-------DQERFERLRYVEVKHGRIAMLAI 80
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 F+DPLGL + D E+ ERL+ E+KH R+AMLA+ Sbjct: 53 FWDPLGLLADA-------DQERFERLRYVEVKHGRIAMLAI 86
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 38.1 bits (87), Expect = 0.010 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPGG F DPLGL +P E LKV E+K+ RLAM +M F+ A GK P Sbjct: 152 YPGGSF-DPLGLAE-------VP--EAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGP 201 Query: 257 L 255 L Sbjct: 202 L 202
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 F+DPLGL + D E+ ERL+ E+KH R+AMLA+ Sbjct: 18 FWDPLGLLADA-------DQERFERLRYVEVKHGRIAMLAI 51
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 38.1 bits (87), Expect = 0.010 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = -3 Query: 452 FTGEQGY--PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 279 F E+G P G FFDPLG T DG E ++L EIKH R+AMLA + + + Sbjct: 2 FENERGVADPVG-FFDPLGF---TADG----SVENFKKLAQTEIKHGRVAMLATMGYITQ 53 Query: 278 AGQGKTP 258 GK P Sbjct: 54 EITGKLP 60
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 37.0 bits (84), Expect = 0.023 Identities = 23/53 (43%), Positives = 28/53 (52%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA 276 YPG FD LGL DTE LKV E+K+ RLAM +M F+ +A Sbjct: 193 YPGS--FDSLGLA---------EDTEAFAELKVKELKNGRLAMFSMFGFFVQA 234
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 37.0 bits (84), Expect = 0.023 Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPG + FDPLGL + PDT LKV EIK+ RLAM + F+ +A GK P Sbjct: 180 YPG-ESFDPLGLADD-------PDT--FAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGP 229 Query: 257 L 255 + Sbjct: 230 I 230
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 36.6 bits (83), Expect = 0.030 Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = -3 Query: 434 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 258 YPG + FDPLGL + PDT LKV EIK+ RLA +M F+ +A GK P Sbjct: 177 YPG-ESFDPLGLADD-------PDT--FAELKVKEIKNGRLASFSMFGFFVQAIVTGKGP 226 Query: 257 L 255 + Sbjct: 227 V 227
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 35.4 bits (80), Expect = 0.067 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 294 FFDPLG+ + D E+ +RL+ E+KH R+A +A L Sbjct: 44 FFDPLGMLADA-------DQERFDRLRYVEVKHGRIAHVAFL 78
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 35.4 bits (80), Expect = 0.067 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 F+DPLGL + D + ERL+ E+KH R+AMLA+ Sbjct: 53 FWDPLGLLADA-------DQDGFERLRYVEVKHGRIAMLAI 86
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 34.7 bits (78), Expect = 0.11 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 ++DPLGL DG + EK +RL+ EIKH R+ MLA+ Sbjct: 45 YWDPLGL---VADG----NQEKFDRLRYVEIKHGRICMLAV 78
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 33.9 bits (76), Expect = 0.20 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = -3 Query: 428 GGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 279 G +FDPLGL E D E+L L+ E+ + RLAM+A+ F + Sbjct: 181 GNLYFDPLGLKPE--------DPEELRELQTKELNNGRLAMIAIAGFVLQ 222
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 32.3 bits (72), Expect = 0.57 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -3 Query: 449 TGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 294 TGE YP + FDPL + D R++V+E+ H+RL+MLA++ Sbjct: 173 TGE--YPADRGFDPLSVAA---------DPTVYARMRVSEVFHARLSMLAIV 213
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = -2 Query: 441 ARVPGRQVLRPPRPRWRDQGRHLHPRHREA*AAQGGRDQALAPRHACHAHLLLRGRTGQD 262 +R PG R P P RD + P R + RD++L+PR H+H R T + Sbjct: 35 SRSPGE---RTPSPPSRDPSPYRSPGERTP-SPSPRRDRSLSPRDQPHSHPRSRSPTPRS 90 Query: 261 AARRARSIR 235 + RS+R Sbjct: 91 QSPSRRSVR 99
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 31.2 bits (69), Expect = 1.3 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -2 Query: 429 GRQVLRPPRPRWRDQGRHLHPRH-----REA*AAQGGRDQALAPRHACHAHLLLRGRTGQ 265 GR+ P RPRW D+ R+ H R+ R+ GGR+ A H RGR G Sbjct: 1045 GREKFYPDRPRW-DRCRYYHDRYALYAARDWKPFHGGREHERAGLHERPHKDHNRGRRGC 1103 Query: 264 DAAR 253 + AR Sbjct: 1104 EPAR 1107
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = -3 Query: 440 QGY-PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYF-EAGQG 267 +GY PG FDPLGL D ++ ++ E+ H RLAM+A F EA G Sbjct: 145 EGYEPGDLGFDPLGLAPS--------DPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSG 196 Query: 266 KT 261 T Sbjct: 197 DT 198 Score = 30.4 bits (67), Expect = 2.2 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -3 Query: 437 GYPGGKF----FDPLG-LGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIF 288 G PGG FDP G L G+ K +Y RL+ AE H R+AMLA L F Sbjct: 35 GLPGGANILGEFDPAGFLKGKDKLEVY--------RLREAETTHGRVAMLASLGF 81
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -3 Query: 446 GEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAG-Q 270 GE GYPGG F+PL + P E E+ E+ + RLAMLA L F + Sbjct: 181 GEVGYPGG-IFNPLN---------FAPTQEAKEK----ELANGRLAMLAFLGFVVQHNVT 226 Query: 269 GKTP 258 GK P Sbjct: 227 GKGP 230
>FCPC_MACPY (Q40299) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 216 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = -3 Query: 419 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 297 F+DPLGL + D + ERL+ E+K R+AMLA+ Sbjct: 52 FWDPLGLLEDA-------DQDAFERLRYVEVKLGRIAMLAI 85
>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor| Length = 561 Score = 30.0 bits (66), Expect = 2.8 Identities = 28/111 (25%), Positives = 37/111 (33%), Gaps = 26/111 (23%) Frame = +1 Query: 196 NKPFLPPRASQKSS-------YRPSAPSGVLPCPXXXXXXXXXXXXRRECLISATLSRSS 354 + P +P R S SS ++P GV PC R + S++ S S Sbjct: 380 SNPIIPSRGSSSSSGYPVGVVFQPVGSGGVQPCGTGSVSSKGPCSGTRIQITSSSSSTSY 439 Query: 355 FSVSGM*MPSLVSPP-------------------RPRGSKNLPPGYPCSPV 450 SG S P +P GSK+ GYPC V Sbjct: 440 HPCSGGSSQGPCSSPGTGSISGGSSSLSSGKIVLQPCGSKSTSSGYPCLSV 490
>MURC_BRUSU (P65469) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 471 Score = 29.3 bits (64), Expect = 4.8 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 20/110 (18%) Frame = +3 Query: 141 LFDVEQIPFNPCVRSD-----AMQQTLSPTARQPKIIL*TERAERRLALSGLEVKDEHGK 305 L D E I + ++ + A ++ L P R+ +++ R R +A+ G HGK Sbjct: 64 LGDAEVIVVSTAIKKNNPELVAAREKLLPVVRRAEMLAELMRFRRAVAIGGT-----HGK 118 Query: 306 HGE----ARVLDLGHLEPLKLLG-----------VGDVDAVLGLATEAEG 410 A +LD GHL+P + G +GD D ++ A E++G Sbjct: 119 TTTTSLVAALLDAGHLDPTVINGGIINAYGTNARMGDGDWMVVEADESDG 168
>MURC_BRUME (P65468) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 471 Score = 29.3 bits (64), Expect = 4.8 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 20/110 (18%) Frame = +3 Query: 141 LFDVEQIPFNPCVRSD-----AMQQTLSPTARQPKIIL*TERAERRLALSGLEVKDEHGK 305 L D E I + ++ + A ++ L P R+ +++ R R +A+ G HGK Sbjct: 64 LGDAEVIVVSTAIKKNNPELVAAREKLLPVVRRAEMLAELMRFRRAVAIGGT-----HGK 118 Query: 306 HGE----ARVLDLGHLEPLKLLG-----------VGDVDAVLGLATEAEG 410 A +LD GHL+P + G +GD D ++ A E++G Sbjct: 119 TTTTSLVAALLDAGHLDPTVINGGIINAYGTNARMGDGDWMVVEADESDG 168
>PRP4B_HUMAN (Q13523) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (PRP4 kinase) Length = 1007 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -2 Query: 453 LHRRARVPGRQVLRPPR----PRWRDQGRHLHPRHREA*AAQGGR 331 + RR+R P R+ P R PR RD+GR R R ++GGR Sbjct: 447 IRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGR 491
>KITH_RHOSI (Q9ZIG2) Thymidine kinase (EC 2.7.1.21)| Length = 213 Score = 29.3 bits (64), Expect = 4.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 190 RCNKPFLPPRASQKSSYRPSAPSGVLPCP 276 RC + F PPR + SS + AP+ P P Sbjct: 182 RCRRCFQPPRPTSTSSLKAPAPAATAPRP 210
>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1234 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 Query: 38 ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 127 +T+ WRK EYLIP + + L E D + Sbjct: 252 VTFRFSWRKNEYLIPVMMIMKALVETNDRE 281
>HIS2_NITWN (Q3SWF2) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 116 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +3 Query: 288 KDEHGKHGEARVLDLGHLEPLKLLGVG--DVDAVLGLATEAEGVEELAAR 431 KD H E L L LK GV DV+AVL T G+EE AAR Sbjct: 64 KDRHHLIAEGADLMFHFLVLLKASGVTLQDVEAVLAQRTAISGLEEKAAR 113
>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 Query: 335 AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 240 AE+ + R+AML L E G+ PL ALGL Sbjct: 355 AEVWNGRIAMLGFLALLVELLTGRGPLHALGL 386
>GCSP2_COLP3 (Q47XG2) Glycine dehydrogenase [decarboxylating] 2 (EC 1.4.4.2)| (Glycine decarboxylase 2) (Glycine cleavage system P-protein 2) Length = 956 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 364 TPRSLSGSRWPRSSTRASPCLPCSSFTSRP 275 T L+GS WPR+ +R + C P SS S+P Sbjct: 895 TLNDLTGSDWPRAYSRLTACYP-SSCPSQP 923
>CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21| Length = 344 Score = 28.5 bits (62), Expect = 8.2 Identities = 24/71 (33%), Positives = 29/71 (40%) Frame = -2 Query: 447 RRARVPGRQVLRPPRPRWRDQGRHLHPRHREA*AAQGGRDQALAPRHACHAHLLLRGRTG 268 RR R GR R R RD R PR R +GGRD+ + RG G Sbjct: 202 RRDRDEGRLNSRERRAPPRDWDRPPTPRGRGGRGGRGGRDREVDS---------YRGAAG 252 Query: 267 QDAARRARSIR 235 +D +R IR Sbjct: 253 RDRSRSRSPIR 263
>EMAL2_HUMAN (O95834) Echinoderm microtubule-associated protein-like 2 (EMAP-2)| (HuEMAP-2) Length = 649 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -1 Query: 232 IFGWRAVGERVCCIASDRTHGLNGICSTSNKQQHFICVRDF 110 + G VCC+ +++G N +C+ H + V D+ Sbjct: 152 VLGLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDW 192
>QCRB_CORDI (Q6NGA3) Probable menaquinol-cytochrome c reductase cytochrome b| subunit (Cytochrome bc1 complex cytochrome b subunit) Length = 540 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = -3 Query: 437 GYPGGKFFDPLGLGGET-KDGIYIPDTEKLERLKVAEIKH-SRLAMLAM 297 G P K + LG GGE + G + PD + L K AEI+H + L +AM Sbjct: 476 GAPVPKQLNDLGFGGEPGRGGYFTPDNDSL-AAKYAEIEHENHLEEMAM 523 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,427,315 Number of Sequences: 219361 Number of extensions: 1355557 Number of successful extensions: 4970 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 4669 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4955 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
