>DLX3_HUMAN (O60479) Homeobox protein DLX-3|
          Length = 287

 Score = 30.8 bits (68), Expect = 0.97
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 35  HGQQINTPTYHNYTGFNHHXXXXXXAPRKMYTYGEETR 148
           +GQ +N  TYH+    N        +P+  YTYG   R
Sbjct: 56  YGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYR 93

>DLX3_MOUSE (Q64205) Homeobox protein DLX-3|
          Length = 287

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 35  HGQQINTPTYHNYTGFNHHXXXXXXAPRKMYTYGEETR 148
           +GQ +N  TYH+    N        +P+  YTYG   R
Sbjct: 56  YGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGGSYR 93

>CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7.12.1)|
           (CDC-like kinase 1)
          Length = 484

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = -2

Query: 241 VRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLTVCVHFTWGFLAFFFVVIKTCVIMI 62
           + T D      C+  ++ + H  +IC  F+  GL T       GFL F    I+     I
Sbjct: 213 LNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQI 272

Query: 61  CWCVNLL 41
           C  VN L
Sbjct: 273 CKSVNFL 279

>DPOD_DROME (P54358) DNA polymerase delta catalytic subunit (EC 2.7.7.7)|
          Length = 1092

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +3

Query: 36   MANKLTHQHIIITQVLITTKKKARKPHVKCTHTVRRPDPSKE*QMFHACTYV 191
            + N++   H++IT+ L  T   A++ HV+    +++ DP    ++     YV
Sbjct: 860  LCNRIDISHLVITKELAKTDYAAKQAHVELAAKMKKRDPGTAPKLGDRVPYV 911

>CLK1_MOUSE (P22518) Dual specificity protein kinase CLK1 (EC 2.7.12.1)|
           (CDC-like kinase 1) (Protein kinase STY)
          Length = 483

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -2

Query: 241 VRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLTVCVHFTWGFLAFFFVVIKTCVIMI 62
           + T D      C+  ++ + H  +IC  F+  GL T        FL F    I+     I
Sbjct: 212 LNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKENSFLPFRMDHIRKMAYQI 271

Query: 61  CWCVNLL 41
           C  VN L
Sbjct: 272 CKSVNFL 278

>NUOA_BUCBP (Q89AU6) NADH-quinone oxidoreductase chain A (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain A) (NDH-1, chain A)
          Length = 132

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 115 WGFLAFFFVVIKTCVIMI 62
           W F  FFF+ +  CV M+
Sbjct: 12  WAFFTFFFIAVSICVFML 29

>GP149_CHICK (Q9DDD1) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor R35)
          Length = 723

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 19/82 (23%)
 Frame = -2

Query: 211 PCISRM----QTYVHAWNICYSF---------DGSGLLTVCVH------FTWGFLAFFFV 89
           PC+S +    +T  H  N C S          + SGL   C++      FT GF    F 
Sbjct: 249 PCLSPVDPVDKTLKHFQNACLSSKAVFRKGVAESSGLEPRCMNNAKSRSFTVGFAQKRFS 308

Query: 88  VIKTCVIMICWCVNLLAMVIKH 23
           +I     +I W   ++ MV++H
Sbjct: 309 LILALTKVILWLPMMIQMVVQH 330

>DPOD_SCHPO (P30316) DNA polymerase delta catalytic subunit (EC 2.7.7.7) (DNA|
            polymerase III)
          Length = 1086

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +3

Query: 36   MANKLTHQHIIITQVLITTKKKARKPHVKCTHTVRRPDPSKE*QMFHACTYVCMRDMHG 212
            + NK+    ++IT+ L  T   A+  HV+    +R+ D      +     YV ++   G
Sbjct: 857  LQNKIDMSQLVITKALSKTDYAAKMAHVELAERMRKRDAGSAPAIGDRVAYVIIKGAQG 915


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,135,213
Number of Sequences: 219361
Number of extensions: 693874
Number of successful extensions: 1688
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1688
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)