Clone Name	rbaet46d11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK065033.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
2	dbj|AB042934.1| Oryza sativa (japonica cultivar-group) mRNA for ...	224	2e-55
3	ref|XM_468577.1| Oryza sativa (japonica cultivar-group), predic...	212	7e-52
4	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	105	1e-19
5	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	105	1e-19
6	gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome...	105	1e-19
7	gb|AC158183.2| Selaginella moellendorffii clone JGIASXY-5D8, com...	68	3e-08
8	emb|X56615.1|SORPL11 S.oleracea mRNA for chloroplast ribosomal p...	64	4e-07
9	ref|NM_103032.2| Arabidopsis thaliana PRPL11 (PLASTID RIBOSOMAL ...	58	3e-05
10	emb|X87296.1|ATRPL11GE A.thaliana rpl11 gene	58	3e-05
11	gb|AY063070.1| Arabidopsis thaliana putative ribosomal protein L...	58	3e-05
12	gb|AF370254.1| Arabidopsis thaliana putative ribosomal protein L...	58	3e-05
13	gb|AF412105.1|AF412105 Arabidopsis thaliana At1g32990/F9L11_15 m...	58	3e-05
14	gb|AF325023.2|AF325023 Arabidopsis thaliana At1g32990 (At1g32990...	58	3e-05
15	emb|BX814569.1|CNS0AEJV Arabidopsis thaliana Full-length cDNA Co...	58	3e-05
16	gb|AY085664.1| Arabidopsis thaliana clone 16773 mRNA, complete s...	58	3e-05
17	gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L...	58	3e-05
18	ref|NM_124540.1| Arabidopsis thaliana structural constituent of ...	48	0.025
19	gb|AF184768.1|AF184768 Arabidopsis thaliana inhibitor tagged sit...	48	0.025
20	dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	48	0.025
21	gb|AY809857.1| Schistosoma japonicum SJCHGC05130 protein mRNA, p...	42	1.5
22	emb|AL035652.8|HS1J6 Human DNA sequence from clone RP1-1J6 on ch...	42	1.5
23	ref|XM_790100.1| PREDICTED: Strongylocentrotus purpuratus hypoth...	42	1.5
24	emb|X73005.1|SPC6RPL1A Synechocystis PCC6803 genes for ribosomal...	42	1.5
25	emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in...	42	1.5
26	emb|BX537289.6| Zebrafish DNA sequence from clone DKEY-35M8 in l...	42	1.5
27	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	42	1.5
28	gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome	40	6.0
29	gb|AC024794.1| Caenorhabditis elegans cosmid Y48G1BM, complete s...	40	6.0
30	ref|XM_422754.1| PREDICTED: Gallus gallus similar to Multidrug r...	40	6.0
31	gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome	40	6.0
32	gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, com...	40	6.0
33	gb|AC124547.4| Mus musculus BAC clone RP23-274I8 from chromosome...	40	6.0
34	emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 ma...	40	6.0
35	ref|XM_545988.2| PREDICTED: Canis familiaris similar to B0416.5a...	40	6.0
36	gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete seq...	40	6.0
37	gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete ...	40	6.0
38	emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in ...	40	6.0
39	gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence	40	6.0
40	emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chr...	40	6.0
41	gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, com...	40	6.0
42	gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cance...	40	6.0
43	gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome	40	6.0
44	emb|CR356236.12| Zebrafish DNA sequence from clone CH211-251P4 i...	40	6.0
45	emb|BX323071.16| Zebrafish DNA sequence from clone DKEYP-51F12, ...	40	6.0
46	emb|BX649302.22| Zebrafish DNA sequence from clone CH211-248I6 i...	40	6.0
47	gb|AC166147.8| Medicago truncatula clone mth2-145g3, complete se...	40	6.0
48	gb|AC090093.7| Homo sapiens chromosome 8, clone RP11-656A10, com...	40	6.0
49	gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold	40	6.0
50	gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, co...	40	6.0
51	gb|AC148019.5| Mus musculus BAC clone RP23-12B6 from chromosome ...	40	6.0
52	gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cance...	40	6.0
53	gb|AY220877.1| Homo sapiens requiem, apoptosis response zinc fin...	40	6.0
54	emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in...	40	6.0
55	dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	6.0
56	emb|CT573093.3| CH250-1K10, complete sequence	40	6.0
57	gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...	40	6.0
58	gb|U43920.1|HSU43920 Human ubi-d4 gene, partial cds	40	6.0
59	dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone...	40	6.0
60	gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge...	40	6.0

---

>dbj|AK065033.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H03, full
           insert sequence
          Length = 986

 Score =  224 bits (113), Expect = 2e-55
 Identities = 263/313 (84%)
 Strand = Plus / Minus

                                                                       
Query: 130 gactagaagaccaccttctccttcttcaccaggatcggtgggtcgacatcgatgcccatg 189
           ||||| |||| |||||| ||||||||| | || || || ||||| || ||||| ||||| 
Sbjct: 682 gactacaagagcaccttttccttcttctcaagtattggagggtcaacctcgattcccata 623

                                                                       
Query: 190 ttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttcaagtca 249
           ||||| |||||||||||||| ||||||||||| || |||||| | ||||||||||| || 
Sbjct: 622 ttagcagcagtgcccgctataattctcatggccgagtcaatgctcttgcagttcaaatct 563

                                                                       
Query: 250 ggcagcttctcctgggcgatcgtgcgtacttggtccacagtcacctttccaaccttctca 309
           |||| |||||| || || || || |||||||| ||  | || || |||||||||||||| 
Sbjct: 562 ggcaacttctcttgagctattgtacgtacttgatctgctgttacttttccaaccttctct 503

                                                                       
Query: 310 cgttgtggctcctttgagcctttttcgacacctgcagccttgaggagcagtactgaggca 369
           || || || || ||||| ||||| |||| |||||| ||||||||||| || |||||||||
Sbjct: 502 cgctgcggttcttttgaacctttctcgatacctgctgccttgaggagaaggactgaggca 443

                                                                       
Query: 370 ggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgatctcgacgggg 429
           ||||| ||||| | |||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 442 ggaggggtcttcaagataaaggtgaaacttttatcatcgaacacggtgatctcgacaggg 383

                        
Query: 430 ataatgtagccgg 442
           || ||||||||||
Sbjct: 382 atgatgtagccgg 370

---

>dbj|AB042934.1| Oryza sativa (japonica cultivar-group) mRNA for plastid ribosomal
           protein L11, complete cds
          Length = 790

 Score =  224 bits (113), Expect = 2e-55
 Identities = 263/313 (84%)
 Strand = Plus / Minus

                                                                       
Query: 130 gactagaagaccaccttctccttcttcaccaggatcggtgggtcgacatcgatgcccatg 189
           ||||| |||| |||||| ||||||||| | || || || ||||| || ||||| ||||| 
Sbjct: 675 gactacaagagcaccttttccttcttctcaagtattggagggtcaacctcgattcccata 616

                                                                       
Query: 190 ttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttcaagtca 249
           ||||| |||||||||||||| ||||||||||| || |||||| | ||||||||||| || 
Sbjct: 615 ttagcagcagtgcccgctataattctcatggccgagtcaatgctcttgcagttcaaatct 556

                                                                       
Query: 250 ggcagcttctcctgggcgatcgtgcgtacttggtccacagtcacctttccaaccttctca 309
           |||| |||||| || || || || |||||||| ||  | || || |||||||||||||| 
Sbjct: 555 ggcaacttctcttgagctattgtacgtacttgatctgctgttacttttccaaccttctct 496

                                                                       
Query: 310 cgttgtggctcctttgagcctttttcgacacctgcagccttgaggagcagtactgaggca 369
           || || || || ||||| ||||| |||| |||||| ||||||||||| || |||||||||
Sbjct: 495 cgctgcggttcttttgaacctttctcgatacctgctgccttgaggagaaggactgaggca 436

                                                                       
Query: 370 ggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgatctcgacgggg 429
           ||||| ||||| | |||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 435 ggaggggtcttcaagataaaggtgaaacttttatcatcgaacacggtgatctcgacaggg 376

                        
Query: 430 ataatgtagccgg 442
           || ||||||||||
Sbjct: 375 atgatgtagccgg 363

---

>ref|XM_468577.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score =  212 bits (107), Expect = 7e-52
 Identities = 248/295 (84%)
 Strand = Plus / Minus

                                                                       
Query: 148 tccttcttcaccaggatcggtgggtcgacatcgatgcccatgttagcggcagtgcccgct 207
           ||||||||| | || || || ||||| || ||||| ||||| ||||| ||||||||||||
Sbjct: 617 tccttcttctcaagtattggagggtcaacctcgattcccatattagcagcagtgcccgct 558

                                                                       
Query: 208 atgattctcatggcagactcaatggttttgcagttcaagtcaggcagcttctcctgggcg 267
           || ||||||||||| || |||||| | ||||||||||| || |||| |||||| || || 
Sbjct: 557 ataattctcatggccgagtcaatgctcttgcagttcaaatctggcaacttctcttgagct 498

                                                                       
Query: 268 atcgtgcgtacttggtccacagtcacctttccaaccttctcacgttgtggctcctttgag 327
           || || |||||||| ||  | || || |||||||||||||| || || || || ||||| 
Sbjct: 497 attgtacgtacttgatctgctgttacttttccaaccttctctcgctgcggttcttttgaa 438

                                                                       
Query: 328 cctttttcgacacctgcagccttgaggagcagtactgaggcaggaggtgtcttgaggata 387
           ||||| |||| |||||| ||||||||||| || |||||||||||||| ||||| | ||||
Sbjct: 437 cctttctcgatacctgctgccttgaggagaaggactgaggcaggaggggtcttcaagata 378

                                                                  
Query: 388 aaggtgaagctcttatcatcgaacacggtgatctcgacggggataatgtagccgg 442
           |||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 377 aaggtgaaacttttatcatcgaacacggtgatctcgacagggatgatgtagccgg 323

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  105 bits (53), Expect = 1e-19
 Identities = 173/213 (81%)
 Strand = Plus / Plus

                                                                           
Query: 130     gactagaagaccaccttctccttcttcaccaggatcggtgggtcgacatcgatgcccatg 189
               ||||| |||| |||||| ||||||||| | || || || ||||| || ||||| ||||| 
Sbjct: 1212235 gactacaagagcaccttttccttcttctcaagtattggagggtcaacctcgattcccata 1212294

                                                                           
Query: 190     ttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttcaagtca 249
               ||||| |||||||||||||| ||||||||||| || |||||| | ||||||||||| || 
Sbjct: 1212295 ttagcagcagtgcccgctataattctcatggccgagtcaatgctcttgcagttcaaatct 1212354

                                                                           
Query: 250     ggcagcttctcctgggcgatcgtgcgtacttggtccacagtcacctttccaaccttctca 309
               |||| |||||| || || || || |||||||| ||  | || || |||||||||||||| 
Sbjct: 1212355 ggcaacttctcttgagctattgtacgtacttgatctgctgttacttttccaaccttctct 1212414

                                                
Query: 310     cgttgtggctcctttgagcctttttcgacacct 342
               || || || || ||||| ||||| |||| ||||
Sbjct: 1212415 cgctgcggttcttttgaacctttctcgatacct 1212447



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                           
Query: 337     acacctgcagccttgaggagcagtactgaggcaggaggtgtcttgaggataaaggtgaag 396
               |||||||| ||||||||||| || |||||||||||||| ||||| | |||||||||||| 
Sbjct: 1213467 acacctgctgccttgaggagaaggactgaggcaggaggggtcttcaagataaaggtgaaa 1213526

                       
Query: 397     ctcttatc 404
               || |||||
Sbjct: 1213527 cttttatc 1213534



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                      
Query: 404     catcgaacacggtgatctcgacggggataatgtagccgg 442
               |||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1213631 catcgaacacggtgatctcgacagggatgatgtagccgg 1213669

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  105 bits (53), Expect = 1e-19
 Identities = 173/213 (81%)
 Strand = Plus / Plus

                                                                           
Query: 130     gactagaagaccaccttctccttcttcaccaggatcggtgggtcgacatcgatgcccatg 189
               ||||| |||| |||||| ||||||||| | || || || ||||| || ||||| ||||| 
Sbjct: 1212233 gactacaagagcaccttttccttcttctcaagtattggagggtcaacctcgattcccata 1212292

                                                                           
Query: 190     ttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttcaagtca 249
               ||||| |||||||||||||| ||||||||||| || |||||| | ||||||||||| || 
Sbjct: 1212293 ttagcagcagtgcccgctataattctcatggccgagtcaatgctcttgcagttcaaatct 1212352

                                                                           
Query: 250     ggcagcttctcctgggcgatcgtgcgtacttggtccacagtcacctttccaaccttctca 309
               |||| |||||| || || || || |||||||| ||  | || || |||||||||||||| 
Sbjct: 1212353 ggcaacttctcttgagctattgtacgtacttgatctgctgttacttttccaaccttctct 1212412

                                                
Query: 310     cgttgtggctcctttgagcctttttcgacacct 342
               || || || || ||||| ||||| |||| ||||
Sbjct: 1212413 cgctgcggttcttttgaacctttctcgatacct 1212445



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                           
Query: 337     acacctgcagccttgaggagcagtactgaggcaggaggtgtcttgaggataaaggtgaag 396
               |||||||| ||||||||||| || |||||||||||||| ||||| | |||||||||||| 
Sbjct: 1213465 acacctgctgccttgaggagaaggactgaggcaggaggggtcttcaagataaaggtgaaa 1213524

                       
Query: 397     ctcttatc 404
               || |||||
Sbjct: 1213525 cttttatc 1213532



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                      
Query: 404     catcgaacacggtgatctcgacggggataatgtagccgg 442
               |||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1213629 catcgaacacggtgatctcgacagggatgatgtagccgg 1213667

---

>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12,
             complete sequence
          Length = 146241

 Score =  105 bits (53), Expect = 1e-19
 Identities = 173/213 (81%)
 Strand = Plus / Plus

                                                                         
Query: 130   gactagaagaccaccttctccttcttcaccaggatcggtgggtcgacatcgatgcccatg 189
             ||||| |||| |||||| ||||||||| | || || || ||||| || ||||| ||||| 
Sbjct: 17137 gactacaagagcaccttttccttcttctcaagtattggagggtcaacctcgattcccata 17196

                                                                         
Query: 190   ttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttcaagtca 249
             ||||| |||||||||||||| ||||||||||| || |||||| | ||||||||||| || 
Sbjct: 17197 ttagcagcagtgcccgctataattctcatggccgagtcaatgctcttgcagttcaaatct 17256

                                                                         
Query: 250   ggcagcttctcctgggcgatcgtgcgtacttggtccacagtcacctttccaaccttctca 309
             |||| |||||| || || || || |||||||| ||  | || || |||||||||||||| 
Sbjct: 17257 ggcaacttctcttgagctattgtacgtacttgatctgctgttacttttccaaccttctct 17316

                                              
Query: 310   cgttgtggctcctttgagcctttttcgacacct 342
             || || || || ||||| ||||| |||| ||||
Sbjct: 17317 cgctgcggttcttttgaacctttctcgatacct 17349



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 337   acacctgcagccttgaggagcagtactgaggcaggaggtgtcttgaggataaaggtgaag 396
             |||||||| ||||||||||| || |||||||||||||| ||||| | |||||||||||| 
Sbjct: 18369 acacctgctgccttgaggagaaggactgaggcaggaggggtcttcaagataaaggtgaaa 18428

                     
Query: 397   ctcttatc 404
             || |||||
Sbjct: 18429 cttttatc 18436



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 404   catcgaacacggtgatctcgacggggataatgtagccgg 442
             |||||||||||||||||||||| ||||| ||||||||||
Sbjct: 18533 catcgaacacggtgatctcgacagggatgatgtagccgg 18571

---

>gb|AC158183.2| Selaginella moellendorffii clone JGIASXY-5D8, complete sequence
          Length = 39479

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 339   acctgcagccttgaggagcagtactgaggcaggaggtgtcttgaggataaaggtgaagct 398
             |||||| || || ||||| || ||||| || ||||||||||||||||| |||||||||||
Sbjct: 33571 acctgcggctttaaggagtagcactgacgccggaggtgtcttgaggatgaaggtgaagct 33630

                   
Query: 399   cttatc 404
             ||||||
Sbjct: 33631 cttatc 33636



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 418   atctcgacggggataatgtagccgg 442
             ||||| |||||||||||||||||||
Sbjct: 33702 atctccacggggataatgtagccgg 33726

---

>emb|X56615.1|SORPL11 S.oleracea mRNA for chloroplast ribosomal protein L11
          Length = 836

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 150 cttcttcaccaggatcggtgggtcgacatcgatgcccatgttagcggcagtgcccgctat 209
           |||||| || ||||| || || |||| |||||| |||||||| || ||||| || || ||
Sbjct: 656 cttcttgacgaggataggaggatcgatatcgattcccatgttggcagcagttcctgcaat 597

                                                       
Query: 210 gattctcatggcagactcaatggttttgcagttcaagtcaggca 253
            |||||||| || || ||||||||| |||| |||||||||||||
Sbjct: 596 aattctcattgctgattcaatggttgtgcaattcaagtcaggca 553

---

>ref|NM_103032.2| Arabidopsis thaliana PRPL11 (PLASTID RIBOSOMAL PROTEIN L11);
           structural constituent of ribosome AT1G32990 (PRPL11)
           mRNA, complete cds
          Length = 853

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
           ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 653 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 594

                            
Query: 244 aagtcaggcagcttctc 260
           | ||| || ||||||||
Sbjct: 593 aggtcgggtagcttctc 577



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 367 gcaggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgat 419
           ||||| || |||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 470 gcaggcggggtcttgagaataaacgtgaagctcttatcatcgaagacagtgat 418

---

>emb|X87296.1|ATRPL11GE A.thaliana rpl11 gene
          Length = 4764

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 184  cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
            ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 3842 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 3783

                             
Query: 244  aagtcaggcagcttctc 260
            | ||| || ||||||||
Sbjct: 3782 aggtcgggtagcttctc 3766



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 367  gcaggaggtgtcttgaggataaaggtgaagctcttatc 404
            ||||| || |||||||| ||||| ||||||||||||||
Sbjct: 3313 gcaggcggggtcttgagaataaacgtgaagctcttatc 3276

---

>gb|AY063070.1| Arabidopsis thaliana putative ribosomal protein L11 (At1g32990)
           mRNA, complete cds
          Length = 700

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
           ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 614 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 555

                            
Query: 244 aagtcaggcagcttctc 260
           | ||| || ||||||||
Sbjct: 554 aggtcgggtagcttctc 538



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 367 gcaggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgat 419
           ||||| || |||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 431 gcaggcggggtcttgagaataaacgtgaagctcttatcatcgaagacagtgat 379

---

>gb|AF370254.1| Arabidopsis thaliana putative ribosomal protein L11 (At1g32990)
           mRNA, complete cds
          Length = 827

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
           ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 649 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 590

                            
Query: 244 aagtcaggcagcttctc 260
           | ||| || ||||||||
Sbjct: 589 aggtcgggtagcttctc 573



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 367 gcaggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgat 419
           ||||| || |||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 466 gcaggcggggtcttgagaataaacgtgaagctcttatcatcgaagacagtgat 414

---

>gb|AF412105.1|AF412105 Arabidopsis thaliana At1g32990/F9L11_15 mRNA, complete cds
          Length = 828

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
           ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 650 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 591

                            
Query: 244 aagtcaggcagcttctc 260
           | ||| || ||||||||
Sbjct: 590 aggtcgggtagcttctc 574



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 367 gcaggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgat 419
           ||||| || |||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 467 gcaggcggggtcttgagaataaacgtgaagctcttatcatcgaagacagtgat 415

---

>gb|AF325023.2|AF325023 Arabidopsis thaliana At1g32990 (At1g32990/F9L11_15) mRNA, complete
           cds
          Length = 844

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
           ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 649 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 590

                            
Query: 244 aagtcaggcagcttctc 260
           | ||| || ||||||||
Sbjct: 589 aggtcgggtagcttctc 573



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 367 gcaggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgat 419
           ||||| || |||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 466 gcaggcggggtcttgagaataaacgtgaagctcttatcatcgaagacagtgat 414

---

>emb|BX814569.1|CNS0AEJV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB81ZC10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1473

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 184  cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
            ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 1168 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 1109

                             
Query: 244  aagtcaggcagcttctc 260
            | ||| || ||||||||
Sbjct: 1108 aggtcgggtagcttctc 1092

---

>gb|AY085664.1| Arabidopsis thaliana clone 16773 mRNA, complete sequence
          Length = 819

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
           ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 653 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 594

                            
Query: 244 aagtcaggcagcttctc 260
           | ||| || ||||||||
Sbjct: 593 aggtcgggtagcttctc 577



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 367 gcaggaggtgtcttgaggataaaggtgaagctcttatcatcgaacacggtgat 419
           ||||| || |||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 470 gcaggcggggtcttgagaataaacgtgaagctcttatcatcgaagacagtgat 418

---

>gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L11 genomic sequence, complete
             sequence
          Length = 122836

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 184   cccatgttagcggcagtgcccgctatgattctcatggcagactcaatggttttgcagttc 243
             ||||||||||| ||||| || || ||||||||||| || || ||||||||  ||||||||
Sbjct: 76617 cccatgttagctgcagttcctgcaatgattctcatagcggattcaatggtcgtgcagttc 76558

                              
Query: 244   aagtcaggcagcttctc 260
             | ||| || ||||||||
Sbjct: 76557 aggtcgggtagcttctc 76541



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 367   gcaggaggtgtcttgaggataaaggtgaagctcttatc 404
             ||||| || |||||||| ||||| ||||||||||||||
Sbjct: 76093 gcaggcggggtcttgagaataaacgtgaagctcttatc 76056

---

>ref|NM_124540.1| Arabidopsis thaliana structural constituent of ribosome AT5G51610
           mRNA, complete cds
          Length = 549

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 369 aggaggtgtcttgaggataaaggtgaagctct 400
           |||||| |||||||||||||| ||||||||||
Sbjct: 309 aggaggggtcttgaggataaaagtgaagctct 278

---

>gb|AF184768.1|AF184768 Arabidopsis thaliana inhibitor tagged site ITS1 genomic sequence
          Length = 804

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 369 aggaggtgtcttgaggataaaggtgaagctct 400
           |||||| |||||||||||||| ||||||||||
Sbjct: 295 aggaggggtcttgaggataaaagtgaagctct 264

---

>dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K17N15
          Length = 81293

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 369   aggaggtgtcttgaggataaaggtgaagctct 400
             |||||| |||||||||||||| ||||||||||
Sbjct: 64877 aggaggggtcttgaggataaaagtgaagctct 64846

---

>gb|AY809857.1| Schistosoma japonicum SJCHGC05130 protein mRNA, partial cds
          Length = 1153

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 27  gaagcaaatgattacaaattt 47
           |||||||||||||||||||||
Sbjct: 254 gaagcaaatgattacaaattt 274

---

>emb|AL035652.8|HS1J6 Human DNA sequence from clone RP1-1J6 on chromosome 20 Contains the 5'
             end of the TOP1 gene for topoisomerase (DNA) I and the 3'
             end of a novel gene, complete sequence
          Length = 88827

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 235   ttgcagttcaagtcaggcagcttctcctg 263
             |||||||||||||||||||  ||||||||
Sbjct: 88605 ttgcagttcaagtcaggcactttctcctg 88577

---

>ref|XM_790100.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC590497 (LOC590497), mRNA
          Length = 4857

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 136  aagaccaccttctccttcttc 156
            |||||||||||||||||||||
Sbjct: 4808 aagaccaccttctccttcttc 4788

---

>emb|X73005.1|SPC6RPL1A Synechocystis PCC6803 genes for ribosomal protein L11 and L1
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 367 gcaggaggtgtcttgaggataaaggtgaa 395
           |||||||| || |||||||||||||||||
Sbjct: 415 gcaggaggagttttgaggataaaggtgaa 387

---

>emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in linkage group 5, complete
              sequence
          Length = 227940

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     caacatatttgtgtacaaaaa 97
              |||||||||||||||||||||
Sbjct: 184923 caacatatttgtgtacaaaaa 184903

---

>emb|BX537289.6| Zebrafish DNA sequence from clone DKEY-35M8 in linkage group 5, complete
              sequence
          Length = 135274

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     caacatatttgtgtacaaaaa 97
              |||||||||||||||||||||
Sbjct: 128381 caacatatttgtgtacaaaaa 128361

---

>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 367    gcaggaggtgtcttgaggataaaggtgaa 395
              |||||||| || |||||||||||||||||
Sbjct: 925091 gcaggaggagttttgaggataaaggtgaa 925119

---

>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 324     tgagcctttttcgacacctgcagc 347
               |||||||||||| |||||||||||
Sbjct: 1629749 tgagcctttttcaacacctgcagc 1629772

---

>gb|AC024794.1| Caenorhabditis elegans cosmid Y48G1BM, complete sequence
          Length = 35030

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aacatatttgtgtacaaaaa 97
             ||||||||||||||||||||
Sbjct: 18333 aacatatttgtgtacaaaaa 18352

---

>ref|XM_422754.1| PREDICTED: Gallus gallus similar to Multidrug resistance-associated
            protein 5 (Multi-specific organic anion tranporter-C)
            (MOAT-C) (pABC11) (SMRP) (LOC424947), mRNA
          Length = 4896

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  accaccttctccttcttcac 158
            ||||||||||||||||||||
Sbjct: 3050 accaccttctccttcttcac 3031

---

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 324    tgagcctttttcgacacctgcagc 347
              |||||||||||| |||||||||||
Sbjct: 379482 tgagcctttttcaacacctgcagc 379459

---

>gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, complete sequence
          Length = 227529

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     aaaaatgaagcaaaaaatgt 112
              ||||||||||||||||||||
Sbjct: 106914 aaaaatgaagcaaaaaatgt 106933

---

>gb|AC124547.4| Mus musculus BAC clone RP23-274I8 from chromosome 1, complete sequence
          Length = 225058

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   ttgaggataaaggtgaagct 398
             ||||||||||||||||||||
Sbjct: 16089 ttgaggataaaggtgaagct 16108

---

>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete sequence
          Length = 179396

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     acaaaaatgaagcaaaaaat 110
              ||||||||||||||||||||
Sbjct: 110013 acaaaaatgaagcaaaaaat 109994

---

>ref|XM_545988.2| PREDICTED: Canis familiaris similar to B0416.5a (LOC488870), mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 143 ccttctccttcttcaccagg 162
           ||||||||||||||||||||
Sbjct: 526 ccttctccttcttcaccagg 507

---

>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence
          Length = 132894

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    acaaaaatgaagcaaaaaat 110
             ||||||||||||||||||||
Sbjct: 50916 acaaaaatgaagcaaaaaat 50897

---

>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence
          Length = 89758

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    acaaaaatgaagcaaaaaat 110
             ||||||||||||||||||||
Sbjct: 83064 acaaaaatgaagcaaaaaat 83045

---

>emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in linkage group 7,
             complete sequence
          Length = 87887

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    acaaaaatgaagcaaaaaat 110
             ||||||||||||||||||||
Sbjct: 65072 acaaaaatgaagcaaaaaat 65053

---

>gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence
          Length = 120831

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    aacatatttgtgtacaaaaatgaa 101
             ||||| ||||||||||||||||||
Sbjct: 38275 aacatttttgtgtacaaaaatgaa 38298

---

>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains
              the 3' end of the OPHN1 gene for oligophrenin 1, complete
              sequence
          Length = 190611

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     acaaaaatgaagcaaaaaat 110
              ||||||||||||||||||||
Sbjct: 103810 acaaaaatgaagcaaaaaat 103829

---

>gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, complete sequence
          Length = 184610

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ccaccttctccttcttcacc 159
             ||||||||||||||||||||
Sbjct: 84726 ccaccttctccttcttcacc 84707

---

>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174576

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    acaaaaatgaagcaaaaaat 110
             ||||||||||||||||||||
Sbjct: 17008 acaaaaatgaagcaaaaaat 17027

---

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     cgatgcccatgttagcggca 198
               ||||||||||||||||||||
Sbjct: 4065362 cgatgcccatgttagcggca 4065343

---

>emb|CR356236.12| Zebrafish DNA sequence from clone CH211-251P4 in linkage group 13,
             complete sequence
          Length = 171465

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    tgtacaaaaatgaagcaaaaaatg 111
             ||||||||||||||| ||||||||
Sbjct: 44415 tgtacaaaaatgaagtaaaaaatg 44392

---

>emb|BX323071.16| Zebrafish DNA sequence from clone DKEYP-51F12, complete sequence
          Length = 208116

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 78     aacatatttgtgtacaaaaatgaagcaaaaaa 109
              |||||||||||||| |||||| || |||||||
Sbjct: 144325 aacatatttgtgtaaaaaaattaaacaaaaaa 144356

---

>emb|BX649302.22| Zebrafish DNA sequence from clone CH211-248I6 in linkage group 12,
             complete sequence
          Length = 154089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 78    aacatatttgtgtacaaaaatgaagcaaaaaa 109
             |||||||||||||| |||||| || |||||||
Sbjct: 93072 aacatatttgtgtaaaaaaattaaacaaaaaa 93103

---

>gb|AC166147.8| Medicago truncatula clone mth2-145g3, complete sequence
          Length = 126336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    acaaaaatgaagcaaaaaat 110
             ||||||||||||||||||||
Sbjct: 16827 acaaaaatgaagcaaaaaat 16808

---

>gb|AC090093.7| Homo sapiens chromosome 8, clone RP11-656A10, complete sequence
          Length = 167115

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ccaccttctccttcttcacc 159
             ||||||||||||||||||||
Sbjct: 19210 ccaccttctccttcttcacc 19191

---

>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold
          Length = 584809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    aacatatttgtgtacaaaaatgaa 101
             ||||| ||||||||||||||||||
Sbjct: 38275 aacatttttgtgtacaaaaatgaa 38298

---

>gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, complete sequence
          Length = 233089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    cctgcagccttgaggagcagtact 363
              |||||||||||| |||||||||||
Sbjct: 128309 cctgcagccttggggagcagtact 128332

---

>gb|AC148019.5| Mus musculus BAC clone RP23-12B6 from chromosome 18, complete sequence
          Length = 211149

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    agctgactagaagaccacct 145
              ||||||||||||||||||||
Sbjct: 134725 agctgactagaagaccacct 134744

---

>gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   agtcacctttccaaccttct 307
             ||||||||||||||||||||
Sbjct: 73991 agtcacctttccaaccttct 74010

---

>gb|AY220877.1| Homo sapiens requiem, apoptosis response zinc finger gene (REQ) gene,
            complete cds
          Length = 20369

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 340  cctgcagccttgaggagcagtact 363
            |||||||||||| |||||||||||
Sbjct: 6535 cctgcagccttggggagcagtact 6558

---

>emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in linkage group 14,
             complete sequence
          Length = 179663

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    aaaatgaagcaaaaaatgta 113
             ||||||||||||||||||||
Sbjct: 33565 aaaatgaagcaaaaaatgta 33584

---

>dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867O8, complete
             sequence
          Length = 219246

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   cctgcagccttgaggagcagtact 363
             |||||||||||| |||||||||||
Sbjct: 81226 cctgcagccttggggagcagtact 81249

---

>emb|CT573093.3| CH250-1K10, complete sequence
          Length = 185363

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 294    ctttccaaccttctcacgttgtggctcc 321
              |||||||||||||||| ||| |||||||
Sbjct: 121315 ctttccaaccttctcaggttttggctcc 121342

---

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 412     acggtgatctcgacggggat 431
               ||||||||||||||||||||
Sbjct: 4583677 acggtgatctcgacggggat 4583658

---

>gb|U43920.1|HSU43920 Human ubi-d4 gene, partial cds
          Length = 291

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 340 cctgcagccttgaggagcagtact 363
           |||||||||||| |||||||||||
Sbjct: 71  cctgcagccttggggagcagtact 94

---

>dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29P11, TM0193,
             complete sequence
          Length = 102354

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 82    tatttgtgtacaaaaatgaagcaaaaaa 109
             |||||||| |||| ||||||||||||||
Sbjct: 92946 tatttgtgaacaacaatgaagcaaaaaa 92919

---

>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 324     tgagcctttttcgacacctgcagc 347
               |||||||||||| |||||||||||
Sbjct: 1627438 tgagcctttttcaacacctgcagc 1627461


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,789,972
Number of Sequences: 3902068
Number of extensions: 4789972
Number of successful extensions: 96829
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96616
Number of HSP's gapped (non-prelim): 213
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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