ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet45h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB219366.1| Hordeum vulgare HvPIP2;1 mRNA for PIP aquaporin,... 672 0.0
2dbj|AB009307.1| Hordeum vulgare HvPIP2;1 mRNA, complete cd 672 0.0
3gb|AF139815.1|AF139815 Triticum aestivum plasma membrane intrins... 309 4e-81
4ref|XM_466869.1| Oryza sativa (japonica cultivar-group), mRNA 143 5e-31
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 143 5e-31
6dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic D... 143 5e-31
7dbj|AK061782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 5e-31
8gb|BT018182.1| Zea mays clone EL01N0557H10.c mRNA sequence 133 5e-28
9gb|AF326494.1|AF326494 Zea mays plasma membrane integral protein... 133 5e-28
10gb|AF326493.1|AF326493 Zea mays plasma membrane integral protein... 133 5e-28
11gb|AY109332.1| Zea mays CL502_5 mRNA sequence 133 5e-28
12ref|XM_473219.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
14emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4,... 105 1e-19
15gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds 92 2e-15
16gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protei... 92 2e-15
17dbj|AB219525.1| Hordeum vulgare HvPIP2;4 mRNA for PIP aquaporin ... 66 1e-07
18ref|XM_479085.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.37
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
20dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
21gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 42 1.5
22gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.5
23gb|AC185988.2| Pan troglodytes BAC clone CH251-398L15 from chrom... 42 1.5
24emb|AL590236.8| Human DNA sequence from clone RP11-145I17 on chr... 42 1.5
25emb|AL353153.18| Human DNA sequence from clone RP5-1000G17 on ch... 42 1.5
26emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.5
27emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.5
28gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete... 42 1.5
29gb|AC119070.3| Homo sapiens BAC clone RP11-164M13 from 4, comple... 42 1.5
30dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31dbj|AK120386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
32gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
33gb|AC010848.14| Drosophila melanogaster clone BACR20N11, complet... 40 5.8
34gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 5.8
35emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on ch... 40 5.8
36emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chr... 40 5.8
37emb|AL354720.14| Human DNA sequence from clone RP11-505F3 on chr... 40 5.8
38emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.8
39emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.8
40emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 40 5.8
41emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.8
42gb|BC061498.1| Mus musculus SWI/SNF related, matrix associated, ... 40 5.8
43emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 5.8
44gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, comple... 40 5.8
45ref|NM_167736.1| Drosophila melanogaster CG32521-RC, transcript ... 40 5.8
46gb|AC010197.7| Homo sapiens 12p12p11-37.2-54.4 BAC RP11-92H16 (R... 40 5.8
47gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, co... 40 5.8
48dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
50gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, comp... 40 5.8
51gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, compl... 40 5.8
52gb|AF305502.1|AF305502 Myoxocephalus scorpius skin-type antifree... 40 5.8
53gb|AC008041.5| Homo sapiens 3 BAC RPCI11-469J4 (Roswell Park Can... 40 5.8
54dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
55gb|AF135398.1|AF135398 Thermus brockianus strain ITI360 putative... 40 5.8
56dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
57dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
58gb|AE003568.4| Drosophila melanogaster chromosome X, section 71 ... 40 5.8
59gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
60gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
61emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.8
62emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.8
63emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.8
64gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, com... 40 5.8

>dbj|AB219366.1| Hordeum vulgare HvPIP2;1 mRNA for PIP aquaporin, complete cds
          Length = 1318

 Score =  672 bits (339), Expect = 0.0
 Identities = 353/360 (98%)
 Strand = Plus / Minus

                                                                        
Query: 74   gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 1202

                                                                        
Query: 134  ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 1142

                                                                        
Query: 194  tagcagcagatgatgcgaagactggagccactgaaccaagcggtgggatcgagcagccat 253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tagcagcagatgatgcgaagactggagccactgaaccaagcggtgggatcgagcagccat 1082

                                                                        
Query: 254  agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgnnnnnnnt 313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 1081 agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgccccccct 1022

                                                                        
Query: 314  cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 962

                                                                        
Query: 374  cgctggccctcagcacatactggtggtaggcggcggcaatggcggcgccgatcagtggcc 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  cgctggccctcagcacatactggtggtaggcggcggcaatggcggcgccgatcagtggcc 902



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>dbj|AB009307.1| Hordeum vulgare HvPIP2;1 mRNA, complete cd
          Length = 1251

 Score =  672 bits (339), Expect = 0.0
 Identities = 353/360 (98%)
 Strand = Plus / Minus

                                                                        
Query: 74   gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gagcgagcaaaagaaaagcacacttggaagaaacagcagcaagcaaacatggcgaactcc 1122

                                                                        
Query: 134  ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 ggaaacacgtcgacatacgaatggacggtcacatcaacatatgcacaagccgaggaacgg 1062

                                                                        
Query: 194  tagcagcagatgatgcgaagactggagccactgaaccaagcggtgggatcgagcagccat 253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tagcagcagatgatgcgaagactggagccactgaaccaagcggtgggatcgagcagccat 1002

                                                                        
Query: 254  agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgnnnnnnnt 313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 1001 agcgcattggctggaggcggccttcttcttcgcacatatctacacttcagtgccccccct 942

                                                                        
Query: 314  cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  cgcgcgtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcgg 882

                                                                        
Query: 374  cgctggccctcagcacatactggtggtaggcggcggcaatggcggcgccgatcagtggcc 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881  cgctggccctcagcacatactggtggtaggcggcggcaatggcggcgccgatcagtggcc 822



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                    
Query: 1    gatcttaaacggtaccaattctttgattaccaaattctcc 40
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 gatcttaaacggtaccaattctttgattaccaaattctcc 1211



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>gb|AF139815.1|AF139815 Triticum aestivum plasma membrane intrinsic protein 2 (PIP2) mRNA,
            complete cds
          Length = 1235

 Score =  309 bits (156), Expect = 4e-81
 Identities = 205/220 (93%), Gaps = 6/220 (2%)
 Strand = Plus / Minus

                                                                        
Query: 90   agcacacttggaagaaacagcagcaagcaaacatggcgaactccggaaacacgtcgacat 149
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1145 agcacacttggaagaaacagcagcaagcaaacatggcgaactccggaa-cacgtcgacgt 1087

                                                                        
Query: 150  acgaatggacggtcacatcaacatatgcacaagccgaggaacggtagcagcagatgatgc 209
            ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1086 acgaatggacggtcacatcgacatatgcacaagccgaggaacggtagcagctgatgatgc 1027

                                                                        
Query: 210  gaagactggagccactga-----accaagcggtgggatcgagcagccatagcgcattggc 264
             |||||||||||||||||     || |||  ||||||||||||| |||||||||||| ||
Sbjct: 1026 aaagactggagccactgaacaggacaaaggtgtgggatcgagcaaccatagcgcatttgc 967

                                                    
Query: 265  tggaggcggccttcttcttcgcacatatctacacttcagt 304
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  tggaggcggccttcttcttcgcacatatctacacttcagt 927



 Score =  180 bits (91), Expect = 2e-42
 Identities = 109/115 (94%)
 Strand = Plus / Minus

                                                                       
Query: 319 gtccggccggagctacgggcgacttagttgctcctgtaggacccgagcttggcggcgctg 378
           ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gtccggccggagcgacggccggcttagttgctcctgtaggacccgagcttggcggcgctg 869

                                                                  
Query: 379 gccctcagcacatactggtggtaggcggcggcaatggcggcgccgatcagtggcc 433
           ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 868 gccctcagcacgtactggtggtaggcggcggcgatggcggcgccgatcagcggcc 814



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 7    aaacggtaccaattctttgattaccaaattctcc 40
            ||||| ||||||||||||||||  ||||||||||
Sbjct: 1216 aaacgataccaattctttgattcacaaattctcc 1183



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>ref|XM_466869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1214

 Score =  143 bits (72), Expect = 5e-31
 Identities = 81/84 (96%)
 Strand = Plus / Minus

                                                                       
Query: 345 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
           |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 928 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 869

                                   
Query: 405 ggcggcaatggcggcgccgatcag 428
           |||||| |||||||||||||||||
Sbjct: 868 ggcggcgatggcggcgccgatcag 845



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  143 bits (72), Expect = 5e-31
 Identities = 81/84 (96%)
 Strand = Plus / Minus

                                                                            
Query: 345      gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
                |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 25184709 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 25184650

                                        
Query: 405      ggcggcaatggcggcgccgatcag 428
                |||||| |||||||||||||||||
Sbjct: 25184649 ggcggcgatggcggcgccgatcag 25184626



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 404      cggcggcaatggcggcgccgatcag 428
                |||||||||||||||||||| ||||
Sbjct: 10937050 cggcggcaatggcggcgccgctcag 10937026



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    gcggcggcaatggcggcgcc 422
              ||||||||||||||||||||
Sbjct: 261396 gcggcggcaatggcggcgcc 261415



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>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1469H02
          Length = 136602

 Score =  143 bits (72), Expect = 5e-31
 Identities = 81/84 (96%)
 Strand = Plus / Minus

                                                                         
Query: 345   gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
             |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 85102 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 85043

                                     
Query: 405   ggcggcaatggcggcgccgatcag 428
             |||||| |||||||||||||||||
Sbjct: 85042 ggcggcgatggcggcgccgatcag 85019



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>dbj|AK061782.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E03, full
           insert sequence
          Length = 1214

 Score =  143 bits (72), Expect = 5e-31
 Identities = 81/84 (96%)
 Strand = Plus / Minus

                                                                       
Query: 345 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
           |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 928 gttgctccggtaggacccgagcttggcggcgctggccctcagcacgtactggtggtaggc 869

                                   
Query: 405 ggcggcaatggcggcgccgatcag 428
           |||||| |||||||||||||||||
Sbjct: 868 ggcggcgatggcggcgccgatcag 845



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>gb|BT018182.1| Zea mays clone EL01N0557H10.c mRNA sequence
          Length = 1215

 Score =  133 bits (67), Expect = 5e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                       
Query: 345 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
           |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 956 gttgctccggtaggacccgagcttggtggcgctggccctcagcacgtactggtggtaggc 897

                                      
Query: 405 ggcggcaatggcggcgccgatcagtgg 431
           |||||| ||||||||||| ||||||||
Sbjct: 896 ggcggcgatggcggcgccaatcagtgg 870



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>gb|AF326494.1|AF326494 Zea mays plasma membrane integral protein ZmPIP2-4 mRNA, complete
           cds
          Length = 1171

 Score =  133 bits (67), Expect = 5e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                       
Query: 345 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
           |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 948 gttgctccggtaggacccgagcttggtggcgctggccctcagcacgtactggtggtaggc 889

                                      
Query: 405 ggcggcaatggcggcgccgatcagtgg 431
           |||||| ||||||||||| ||||||||
Sbjct: 888 ggcggcgatggcggcgccaatcagtgg 862



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>gb|AF326493.1|AF326493 Zea mays plasma membrane integral protein ZmPIP2-3 mRNA, complete
           cds
          Length = 1156

 Score =  133 bits (67), Expect = 5e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                       
Query: 345 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
           |||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 938 gttgctccggtaggacccgagcttggtggcgctggctctcagcacgtactggtggtaggc 879

                                      
Query: 405 ggcggcaatggcggcgccgatcagtgg 431
           |||||| ||||||||||||||||||||
Sbjct: 878 ggcggcgatggcggcgccgatcagtgg 852



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>gb|AY109332.1| Zea mays CL502_5 mRNA sequence
          Length = 1969

 Score =  133 bits (67), Expect = 5e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                       
Query: 345 gttgctcctgtaggacccgagcttggcggcgctggccctcagcacatactggtggtaggc 404
           |||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 366 gttgctccggtaggacccgagcttggtggcgctggctctcagcacgtactggtggtaggc 307

                                      
Query: 405 ggcggcaatggcggcgccgatcagtgg 431
           |||||| ||||||||||||||||||||
Sbjct: 306 ggcggcgatggcggcgccgatcagtgg 280



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>ref|XM_473219.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 361 ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcggcaatggcggcg 420
           |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 848 ccgagcttggcggcgctggccctcaggacgtactggtggtaggcggcggcgatggcggcg 789

                
Query: 421 ccgat 425
           |||||
Sbjct: 788 ccgat 784



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                            
Query: 361      ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcggcaatggcggcg 420
                |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 26074840 ccgagcttggcggcgctggccctcaggacgtactggtggtaggcggcggcgatggcggcg 26074781

                     
Query: 421      ccgat 425
                |||||
Sbjct: 26074780 ccgat 26074776



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>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                          
Query: 361    ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcggcaatggcggcg 420
              |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 109167 ccgagcttggcggcgctggccctcaggacgtactggtggtaggcggcggcgatggcggcg 109108

                   
Query: 421    ccgat 425
              |||||
Sbjct: 109107 ccgat 109103



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>gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds
          Length = 1104

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 364 agcttggcggcgctggccctcagcacatactggtggtaggcggcggcaatggcggcgccg 423
           |||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 833 agcttggcggcgctggccctcagcacgtactggtggtacgccgcggcgatggcggcgccg 774

             
Query: 424 at 425
           ||
Sbjct: 773 at 772



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>gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protein (pip2-5) mRNA, complete
           cds
          Length = 1207

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 364 agcttggcggcgctggccctcagcacatactggtggtaggcggcggcaatggcggcgccg 423
           |||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||
Sbjct: 888 agcttggcggcgctggccctcagcacgtactggtggtacgccgcggcgatggcggcgccg 829

             
Query: 424 at 425
           ||
Sbjct: 828 at 827



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>dbj|AB219525.1| Hordeum vulgare HvPIP2;4 mRNA for PIP aquaporin isoform, complete
           cds
          Length = 1343

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 361 ccgagcttggcggcgctggccctcagcacatactggtggtaggcggcggcaatggcggcg 420
           |||| ||||| |||||||||||||||||| |||||||||||   |||||| |||||||| 
Sbjct: 918 ccgaacttggtggcgctggccctcagcacgtactggtggtacaaggcggcgatggcggcc 859

                
Query: 421 ccgat 425
           |||||
Sbjct: 858 ccgat 854



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>ref|XM_479085.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1356

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 402 ggcggcggcaatggcggcgccg 423
           ||||||||||||||||||||||
Sbjct: 831 ggcggcggcaatggcggcgccg 852



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 402      ggcggcggcaatggcggcgccg 423
                ||||||||||||||||||||||
Sbjct: 24703073 ggcggcggcaatggcggcgccg 24703052



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 14      accaattctttgattaccaaattc 37
               |||||||||||| |||||||||||
Sbjct: 4045030 accaattctttgcttaccaaattc 4045007



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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0040H10
          Length = 132919

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 402   ggcggcggcaatggcggcgccg 423
             ||||||||||||||||||||||
Sbjct: 59010 ggcggcggcaatggcggcgccg 58989



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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 405   ggcggcaatggcggcgccgat 425
             |||||||||||||||||||||
Sbjct: 64368 ggcggcaatggcggcgccgat 64388



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 403     gcggcggcaatggcggcgccg 423
               |||||||||||||||||||||
Sbjct: 1191824 gcggcggcaatggcggcgccg 1191804



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 403     gcggcggcaatggcggcgccg 423
               |||||||||||||||||||||
Sbjct: 1189908 gcggcggcaatggcggcgccg 1189888



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     cggcggcaatggcggcgccg 423
               ||||||||||||||||||||
Sbjct: 1385182 cggcggcaatggcggcgccg 1385163



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>gb|AC185988.2| Pan troglodytes BAC clone CH251-398L15 from chromosome 6, complete
              sequence
          Length = 148530

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 83     aaagaaaagcacacttggaagaaac 107
              |||||||| ||||||||||||||||
Sbjct: 110966 aaagaaaaacacacttggaagaaac 110990



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>emb|AL590236.8| Human DNA sequence from clone RP11-145I17 on chromosome Xq21.1-21.33,
             complete sequence
          Length = 79387

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 83    aaagaaaagcacacttggaagaaac 107
             ||||||||| |||||||||||||||
Sbjct: 40318 aaagaaaagtacacttggaagaaac 40342



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>emb|AL353153.18| Human DNA sequence from clone RP5-1000G17 on chromosome 6, complete
             sequence
          Length = 95430

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    aaagaaaagcacacttggaagaaac 107
             |||||||| ||||||||||||||||
Sbjct: 35576 aaagaaaaacacacttggaagaaac 35552



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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    gcggcggcaatggcggcgccg 423
              |||||||||||||||||||||
Sbjct: 157799 gcggcggcaatggcggcgccg 157779



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    gcggcggcaatggcggcgccg 423
              |||||||||||||||||||||
Sbjct: 156075 gcggcggcaatggcggcgccg 156055



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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    gcggcggcaatggcggcgccg 423
              |||||||||||||||||||||
Sbjct: 205946 gcggcggcaatggcggcgccg 205926



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    gcggcggcaatggcggcgccg 423
              |||||||||||||||||||||
Sbjct: 203322 gcggcggcaatggcggcgccg 203302



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>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence
          Length = 127223

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   ggtcacatcaacatatgcaca 180
             |||||||||||||||||||||
Sbjct: 33938 ggtcacatcaacatatgcaca 33958



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>gb|AC119070.3| Homo sapiens BAC clone RP11-164M13 from 4, complete sequence
          Length = 34461

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    aagaaaagcacacttggaaga 104
             |||||||||||||||||||||
Sbjct: 18083 aagaaaagcacacttggaaga 18063



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>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1756_H07
          Length = 217205

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 404    cggcggcaatggcggcgccgatcag 428
              |||||||||||||||||||| ||||
Sbjct: 143249 cggcggcaatggcggcgccgctcag 143225



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>dbj|AK120386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073J03, full
           insert sequence
          Length = 616

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 gttgctcctgtaggacccgagcttg 369
           |||||||| ||||||||||||||||
Sbjct: 288 gttgctccggtaggacccgagcttg 264



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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ggtaggcggcggcaatggcg 417
             ||||||||||||||||||||
Sbjct: 55416 ggtaggcggcggcaatggcg 55397



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>gb|AC010848.14| Drosophila melanogaster clone BACR20N11, complete sequence
          Length = 175978

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   aggcggcggcaatggcggcg 420
             ||||||||||||||||||||
Sbjct: 76081 aggcggcggcaatggcggcg 76062



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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    aggcggcggcaatggcggcg 420
              ||||||||||||||||||||
Sbjct: 453937 aggcggcggcaatggcggcg 453956



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>emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on chromosome 10 Contains the
              3' end of a novel gene and a novel gene, complete sequence
          Length = 220225

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    ttgctcctgtaggacccgag 365
              ||||||||||||||||||||
Sbjct: 100729 ttgctcctgtaggacccgag 100748



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>emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chromosome 13, complete
             sequence
          Length = 149684

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   tcacatcaacatatgcacaa 181
             ||||||||||||||||||||
Sbjct: 78375 tcacatcaacatatgcacaa 78394



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>emb|AL354720.14| Human DNA sequence from clone RP11-505F3 on chromosome 13 Contains the 3'
              end of the gene for progesterone-induced blocking factor 1
              (PIBF1), a proteasome (prosome, macropain) 26S subunit,
              non-ATPase, 10 (PSMD10) pseudogene, the KLF5 gene for
              Kruppel-like factor 5 (intestinal)(CKLF, IKLF, BTEB2), a
              fatty acid binding protein 5 (psoriasis-associated)
              (FABP5)(EFABP, E-FABP, PAFABP, PA-FABP) pseudogene and a
              CpG island, complete sequence
          Length = 199882

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ctggagccactgaaccaagc 234
              ||||||||||||||||||||
Sbjct: 183049 ctggagccactgaaccaagc 183030



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>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13
          Length = 348264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 404  cggcggcaatggcggcgccg 423
            ||||||||||||||||||||
Sbjct: 2651 cggcggcaatggcggcgccg 2632



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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   tactggtggtaggcggcggc 410
             ||||||||||||||||||||
Sbjct: 74741 tactggtggtaggcggcggc 74722



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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    tactggtggtaggcggcggc 410
              ||||||||||||||||||||
Sbjct: 187779 tactggtggtaggcggcggc 187760



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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             5/14
          Length = 299450

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cggcggcaatggcggcgccg 423
             ||||||||||||||||||||
Sbjct: 72338 cggcggcaatggcggcgccg 72319



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>gb|BC061498.1| Mus musculus SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin, subfamily e, member 1, mRNA
           (cDNA clone MGC:70264 IMAGE:5251562), complete cds
          Length = 2386

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 cgcgtccggccggagctacgggcg 339
           ||||||||||||||||| ||||||
Sbjct: 5   cgcgtccggccggagctgcgggcg 28



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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 404     cggcggcaatggcggcgccg 423
               ||||||||||||||||||||
Sbjct: 1084234 cggcggcaatggcggcgccg 1084253



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>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence
          Length = 118183

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ggcggcggcaatggcggcgc 421
             ||||||||||||||||||||
Sbjct: 30764 ggcggcggcaatggcggcgc 30745



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>ref|NM_167736.1| Drosophila melanogaster CG32521-RC, transcript variant C (CG32521),
           mRNA
          Length = 1220

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 401 aggcggcggcaatggcggcg 420
           ||||||||||||||||||||
Sbjct: 923 aggcggcggcaatggcggcg 942



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>gb|AC010197.7| Homo sapiens 12p12p11-37.2-54.4 BAC RP11-92H16 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 151011

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aagaaaagcacacttggaag 103
             ||||||||||||||||||||
Sbjct: 79101 aagaaaagcacacttggaag 79120



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>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence
          Length = 207997

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 351    cctgtaggacccgagcttggcggc 374
              |||| |||||||||||||||||||
Sbjct: 193419 cctgcaggacccgagcttggcggc 193396



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 402      ggcggcggcaatggcggcgc 421
                ||||||||||||||||||||
Sbjct: 23921998 ggcggcggcaatggcggcgc 23921979



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 402      ggcggcggcaatggcggcgc 421
                ||||||||||||||||||||
Sbjct: 18401970 ggcggcggcaatggcggcgc 18401989



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     ggtaggcggcggcaatggcg 417
               ||||||||||||||||||||
Sbjct: 3687744 ggtaggcggcggcaatggcg 3687725



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>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence
          Length = 159064

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   cctgtaggacccgagcttggcggc 374
             |||| |||||||||||||||||||
Sbjct: 53537 cctgcaggacccgagcttggcggc 53560



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>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence
          Length = 158692

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    aaagaaaagcacacttggaagaaa 106
             ||||||||| ||||||||||||||
Sbjct: 56776 aaagaaaagtacacttggaagaaa 56799



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>gb|AF305502.1|AF305502 Myoxocephalus scorpius skin-type antifreeze polypeptide AFP-2 mRNA,
           complete cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 401 aggcggcggcaatggcggcg 420
           ||||||||||||||||||||
Sbjct: 91  aggcggcggcaatggcggcg 110



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>gb|AC008041.5| Homo sapiens 3 BAC RPCI11-469J4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 178896

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  aggacccgagcttggcggcg 375
            ||||||||||||||||||||
Sbjct: 3614 aggacccgagcttggcggcg 3633



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>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534H07
          Length = 144689

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    accaattctttgattaccaaattc 37
             |||||||||||| |||||||||||
Sbjct: 37888 accaattctttgcttaccaaattc 37865



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>gb|AF135398.1|AF135398 Thermus brockianus strain ITI360 putative galactoside binding protein
            (bdtE) gene, partial cds; and putative integral membrane
            protein (bdtF), putative integral membrane protein
            (bdtG), beta-galactosidase (bgaT), alpha-galactosidase
            (agaT), galactose-1-phosphate uridylyltransferase homolog
            (galT), glycerol kinase homolog (glpK), and glycerol
            dehydrogenase homolog (glpD) genes, complete cds
          Length = 10091

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  cttggcggcgctggccctca 385
            ||||||||||||||||||||
Sbjct: 2375 cttggcggcgctggccctca 2394



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>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C06
          Length = 110989

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   gcggcggcaatggcggcgcc 422
             ||||||||||||||||||||
Sbjct: 71371 gcggcggcaatggcggcgcc 71390



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>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             clone:OJA1212_C06
          Length = 113554

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   gcggcggcaatggcggcgcc 422
             ||||||||||||||||||||
Sbjct: 73936 gcggcggcaatggcggcgcc 73955



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>gb|AE003568.4| Drosophila melanogaster chromosome X, section 71 of 74 of the
            complete sequence
          Length = 315815

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  aggcggcggcaatggcggcg 420
            ||||||||||||||||||||
Sbjct: 4185 aggcggcggcaatggcggcg 4166



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     ggtaggcggcggcaatggcg 417
               ||||||||||||||||||||
Sbjct: 3696438 ggtaggcggcggcaatggcg 3696419



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 402      ggcggcggcaatggcggcgc 421
                ||||||||||||||||||||
Sbjct: 23850204 ggcggcggcaatggcggcgc 23850185



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 402      ggcggcggcaatggcggcgc 421
                ||||||||||||||||||||
Sbjct: 18328196 ggcggcggcaatggcggcgc 18328215



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>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138585

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   ggcggcggcaatggcggcgc 421
             ||||||||||||||||||||
Sbjct: 53869 ggcggcggcaatggcggcgc 53888



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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144767

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   ggcggcggcaatggcggcgc 421
             ||||||||||||||||||||
Sbjct: 51185 ggcggcggcaatggcggcgc 51204



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>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    ggcggcggcaatggcggcgc 421
              ||||||||||||||||||||
Sbjct: 165398 ggcggcggcaatggcggcgc 165417



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>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence
          Length = 65756

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 351   cctgtaggacccgagcttggcggc 374
             |||| |||||||||||||||||||
Sbjct: 34175 cctgcaggacccgagcttggcggc 34152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,926,239
Number of Sequences: 3902068
Number of extensions: 2926239
Number of successful extensions: 62969
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62136
Number of HSP's gapped (non-prelim): 830
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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