ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet45g08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 220 bits (111), Expect = 2e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 175 ttgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggc 234 |||||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||| | Sbjct: 276 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 217 Query: 235 ggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccat 294 ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 216 ggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcggccat 157 Query: 295 cctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 156 cctcaagctgcttaccggcaaagatgagacgctgctggtccgg 114
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 220 bits (111), Expect = 2e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 175 ttgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggc 234 |||||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||| | Sbjct: 276 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 217 Query: 235 ggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccat 294 ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 216 ggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcggccat 157 Query: 295 cctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 156 cctcaagctgcttaccggcaaagatgagacgctgctggtccgg 114
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 220 bits (111), Expect = 2e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 175 ttgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggc 234 |||||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||| | Sbjct: 257 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 198 Query: 235 ggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccat 294 ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 197 ggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcggccat 138 Query: 295 cctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 137 cctcaagctgcttaccggcaaagatgagacgctgctggtccgg 95
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 196 bits (99), Expect = 3e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 194 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 253 |||||||||||||| || |||||| |||||||||||||||||||||||| |||||| || Sbjct: 28020554 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 28020495 Query: 254 cgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 313 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 28020494 ggactccttctggatgttgtaatccgcaagggtgcggccatcctcaagctgcttaccagc 28020435 Query: 314 aaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||||||||| |||||| Sbjct: 28020434 aaagatcagacgctgctggtccggggggatg 28020404 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 28019144 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 28019085 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 28019084 ctcaagctgcttgccagcaaagatgagacgctgctggtccggggggatg 28019036 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 28019372 gagcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatc 28019313 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 28019312 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 28019264 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || |||||||| || Sbjct: 28020056 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccgtc 28019997 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 28019996 ctccagctgcttgccagcgaagatgagacgctgctggtccggggggatg 28019948 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 28020280 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 28020221 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 28020220 agctgcttgccggcgaagatgaggcgctgctggtccggggggat 28020177 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 28019600 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 28019541 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || |||||||| ||||||||||| || |||||| Sbjct: 28019540 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatg 28019492 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || || Sbjct: 27575471 gtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagttg 27575530 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| || |||||||| ||||| Sbjct: 27575531 cttgccagcaaagatgagacgttgctggtcaggtgg 27575566 Score = 111 bits (56), Expect = 1e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 226 cacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagag 285 |||||||||||||||||| ||| | ||| ||||||||||| |||||||| || ||||| | Sbjct: 27575224 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtg 27575283 Query: 286 tgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | || |||||||| |||||||| | |||||||||||||||||||||||||| Sbjct: 27575284 tacgtccatcctcgagctgcttgtctgcaaagatgaggcgctgctggtccgg 27575335 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| || |||||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 28019819 gtggagggtggattccttctggatgttgtagtcggcaagggtgcggccgtcctccagctg 28019760 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| || || |||||||| |||||||||||||| |||||| Sbjct: 28019759 cttgccggcgaagatgagacgctgctggtccggggggatg 28019720
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 196 bits (99), Expect = 3e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 194 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 253 |||||||||||||| || |||||| |||||||||||||||||||||||| |||||| || Sbjct: 65373 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 65314 Query: 254 cgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 313 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 65313 ggactccttctggatgttgtaatccgcaagggtgcggccatcctcaagctgcttaccagc 65254 Query: 314 aaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||||||||| |||||| Sbjct: 65253 aaagatcagacgctgctggtccggggggatg 65223 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 63963 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 63904 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 63903 ctcaagctgcttgccagcaaagatgagacgctgctggtccggggggatg 63855 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 64191 gagcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatc 64132 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 64131 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 64083 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || |||||||| || Sbjct: 64875 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccgtc 64816 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 64815 ctccagctgcttgccagcgaagatgagacgctgctggtccggggggatg 64767 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 65099 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 65040 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 65039 agctgcttgccggcgaagatgaggcgctgctggtccggggggat 64996 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 64419 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 64360 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || |||||||| ||||||||||| || |||||| Sbjct: 64359 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatg 64311 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| || |||||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 64638 gtggagggtggattccttctggatgttgtagtcggcaagggtgcggccgtcctccagctg 64579 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| || || |||||||| |||||||||||||| |||||| Sbjct: 64578 cttgccggcgaagatgagacgctgctggtccggggggatg 64539
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 196 bits (99), Expect = 3e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 194 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 253 |||||||||||||| || |||||| |||||||||||||||||||||||| |||||| || Sbjct: 1694 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 1635 Query: 254 cgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 313 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 1634 ggactccttctggatgttgtaatccgcaagggtgcggccatcctcaagctgcttaccagc 1575 Query: 314 aaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||||||||| |||||| Sbjct: 1574 aaagatcagacgctgctggtccggggggatg 1544 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 284 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 225 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 224 ctcaagctgcttgccagcaaagatgagacgctgctggtccggggggatg 176 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 512 gagcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatc 453 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 452 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 404 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1420 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1361 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 1360 agctgcttgccggcgaagatgaggcgctgctggtccggggggat 1317 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||| ||||||||| || || |||||||| || Sbjct: 1196 gagcacaaggtggagggtggactccttctggacgttgtagtcggcaagggtgcggccgtc 1137 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 1136 ctccagctgcttgccagcgaagatgagacgctgctggtccggggggatg 1088 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 740 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 681 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || |||||||| ||||||||||| || |||||| Sbjct: 680 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatg 632 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| || |||||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 959 gtggagggtggattccttctggatgttgtagtcggcaagggtgcggccgtcctccagctg 900 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| || || |||||||| |||||||||||||| |||||| Sbjct: 899 cttgccggcgaagatgagacgctgctggtccggggggatg 860
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 192 bits (97), Expect = 5e-46 Identities = 112/117 (95%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 488 gccaccgcggaggcggagcaccaagtggagggtggactccttctggatgttgtagtccgc 429 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 428 aagggtgcggccatcctcaagctgcttaccagcaaagatcaggcgctgctggtccgg 372 Score = 188 bits (95), Expect = 8e-45 Identities = 153/171 (89%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 175 ttgtgagcccaga-gacataagcagctccatggccaagcacttacaggccaccacggagg 233 |||||| |||||| |||| ||| | ||||||||||| |||||||| ||||||||||||| Sbjct: 991 ttgtgaacccagatgacacaagaacctccatggccaggcacttactggccaccacggaga 932 Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||||| ||| ||||| ||||||||||||||||||||||| || || ||||||||| Sbjct: 931 cggagcaccaggtgaagggtggactccttctggatgttgtagtcggcaagggtgcggcca 872 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| |||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 871 tcctcgagctgcttgccggcaaagatgaggcgctgctggtccggggggatg 821 Score = 167 bits (84), Expect = 3e-38 Identities = 114/124 (91%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 716 gccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 657 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || || Sbjct: 656 gagagtgcggccgtcctcaagttgctttccagcaaagatgagacgctgctggtctggagg 597 Query: 341 gatg 344 |||| Sbjct: 596 gatg 593 Score = 143 bits (72), Expect = 4e-31 Identities = 111/124 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 260 gccaccgcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcagc 201 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| || ||||| |||||||| |||||||||||||| ||||| || Sbjct: 200 aagggtgcggccgtcctctagttgcttgccagcaaatatgaggcgctgctgatccggagg 141 Query: 341 gatg 344 |||| Sbjct: 140 gatg 137
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 192 bits (97), Expect = 5e-46 Identities = 133/145 (91%) Strand = Plus / Minus Query: 193 aagcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggaggg 252 |||| ||||||| | || |||||||| ||||||||||||| |||||||||||||| |||| Sbjct: 256 aagccgctccattgacaggcacttactggccaccacggagacggagcaccaagtgaaggg 197 Query: 253 tcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccag 312 | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 196 tggactccttctggatgttatagtccgccagggtgcggccatcctcaagctgcttaccag 137 Query: 313 caaagatgaggcgctgctggtccgg 337 | ||||| ||||||||||||||||| Sbjct: 136 cgaagatcaggcgctgctggtccgg 112
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 188 bits (95), Expect = 8e-45 Identities = 137/151 (90%) Strand = Plus / Minus Query: 194 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 253 |||||||||||||| || |||||| ||||||||||||||||||| |||| |||||| || Sbjct: 1448 agcagctccatggctgaggacttactggccaccacggaggcggaggaccaggtggagtgt 1389 Query: 254 cgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 313 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1388 ggactccttctggatgttgtaatccgccaaggtgcggccatcctcaagctgcttaccagc 1329 Query: 314 aaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||||||||| |||||| Sbjct: 1328 aaagatcagacgctgctggtccggggggatg 1298 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 494 gagcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatc 435 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 434 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 386 Score = 143 bits (72), Expect = 4e-31 Identities = 93/100 (93%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 257 gtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcctcaagctg 198 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 197 cttgccagcgaagatgagacgctgctggtccggggggatg 158 Score = 113 bits (57), Expect = 4e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1174 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1115 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| || || |||||||| |||||||||||||| |||||| Sbjct: 1114 agctgcttgccggcgaagatgagacgctgctggtccggggggatg 1070 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 722 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 663 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || |||||||| ||||||||||| || |||||| Sbjct: 662 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatg 614 Score = 111 bits (56), Expect = 1e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 946 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 887 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 886 agctgcttgccggcgaagatgagacgctgctggtccggggggat 843
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 180 bits (91), Expect = 2e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 194 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 253 |||||||||||||| || |||||| |||||||||||||||| || |||| |||||| || Sbjct: 1439 agcagctccatggctgaggacttactggccaccacggaggcgcagaaccaggtggagtgt 1380 Query: 254 cgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 313 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1379 ggactccttctggatgttgtaatccgccaaggtgcggccatcctcaagctgcttaccagc 1320 Query: 314 aaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||||||||| |||||| Sbjct: 1319 aaagatcagacgctgctggtccggggggatg 1289 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 485 gagcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatc 426 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 425 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 377 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 257 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 198 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 197 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 149 Score = 137 bits (69), Expect = 3e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 941 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccatc 882 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 881 ctccagctgcttgccagcaaagatgagacgctgctggtccggggggatg 833 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 713 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 654 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || |||||||| ||||||||||| || |||||| Sbjct: 653 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatg 605 Score = 111 bits (56), Expect = 1e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1165 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1106 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 1105 agctgcttgccggcgaagatgagacgctgctggtccggggggat 1062
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 180 bits (91), Expect = 2e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 194 agcagctccatggccaagcacttacaggccaccacggaggcggagcaccaagtggagggt 253 |||||||||||||| || |||||| |||||||||||||||| || |||| |||||| || Sbjct: 3096 agcagctccatggctgaggacttactggccaccacggaggcgcagaaccaggtggagtgt 3037 Query: 254 cgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagc 313 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 3036 ggactccttctggatgttgtaatccgccaaggtgcggccatcctcaagctgcttaccagc 2977 Query: 314 aaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||||||||| |||||| Sbjct: 2976 aaagatcagacgctgctggtccggggggatg 2946 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 2142 gagcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatc 2083 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 2082 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 2034 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1914 gagcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatc 1855 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 1854 ctcaagctgcttgccagcgaagatgagacgctgctggtccggggggatg 1806 Score = 137 bits (69), Expect = 3e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 2598 gagcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccatc 2539 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 2538 ctccagctgcttgccagcaaagatgagacgctgctggtccggggggatg 2490 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 2822 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctca 2763 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 2762 agctgcttgccggcgaagatgagacgctgctggtccggggggat 2719 Score = 113 bits (57), Expect = 4e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct: 2370 gagcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatc 2311 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || |||||||| ||||||||||| || |||||| Sbjct: 2310 ctccagctgcttgccggcgaagatgagacgctgctggtctggggggatg 2262
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 167 bits (84), Expect = 3e-38 Identities = 120/132 (90%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| ||||||||||||| || ||||||| ||||||||| |||||||||||||||||| Sbjct: 1213 acttactggccaccacggagacgaagcaccaggtggagggtggactccttctggatgttg 1154 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 || |||||||| |||||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 1153 taatccgccagggtgcggccatcctccagctgcttgccagcaaagatcagacgctgctgg 1094 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 1093 tccggcgggatg 1082 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 953 gtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcctcaagctg 894 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 893 cttgccagcgaagatgagacgctgctggtccggggggatg 854 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||||||||| ||||||||||||||||||||||| || || || ||||| |||||| Sbjct: 502 accaggtggagggtggactccttctggatgttgtagtcagcaagggtacggccgtcctca 443 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 442 agctgcttcccagcgaagatgagacgctgctggtccgg 405 Score = 111 bits (56), Expect = 1e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| || || || || ||||| ||||||||||| Sbjct: 725 gtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtcctcaagctg 666 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 665 cttcccagcgaagatgagacgctgctggtccggagggatg 626 Score = 109 bits (55), Expect = 6e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| || || || || ||||| ||||||||||| Sbjct: 269 gtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtcctcaagctg 210 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 209 cttcccagcgaagatgagacgctgctggtccggggggat 171
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 165 bits (83), Expect = 1e-37 Identities = 128/143 (89%) Strand = Plus / Minus Query: 202 catggccaagcacttacaggccaccacggaggcggagcaccaagtggagggtcgactcct 261 ||||||| || |||||| ||||||||||||| |||||||||| |||||| || ||||||| Sbjct: 4847 catggcccaggacttactggccaccacggagacggagcaccaggtggagagtggactcct 4788 Query: 262 tctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatga 321 |||||||||||||||| ||||| |||||||||||||| |||||||| || || ||||||| Sbjct: 4787 tctggatgttgtagtctgccagggtgcggccatcctccagctgcttgccggcgaagatga 4728 Query: 322 ggcgctgctggtccggtgggatg 344 | |||||||||||||| |||||| Sbjct: 4727 gacgctgctggtccggggggatg 4705 Score = 147 bits (74), Expect = 3e-32 Identities = 110/123 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| || ||||||||||||| ||| ||||| |||||||||||||||||||| || ||| Sbjct: 4599 ccaccgcgaaggcggagcaccaggtgaagggtggactccttctggatgttgtantctgcc 4540 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||| Sbjct: 4539 agggtgcggccatcctcaagctgcttgccagcaaagataaracgctgctggtccgggggg 4480 Query: 342 atg 344 ||| Sbjct: 4479 atg 4477 Score = 139 bits (70), Expect = 7e-30 Identities = 108/123 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||| ||| ||||| ||||| |||||||||||||| ||||| Sbjct: 4371 ccaccacgaaggcggagcaccaggtgaagggtggactcyttctggatgttgtantccgca 4312 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 4311 agggtgcggccatcctcaagytgcttgccggcgaaratgagacgctgctggtccgggggg 4252 Query: 342 atg 344 ||| Sbjct: 4251 atg 4249 Score = 115 bits (58), Expect = 1e-22 Identities = 95/108 (87%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | |||||| |||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4129 gagcacaaggtggagagtcgactccttctggatgttgtagtcagcgagggtgcggccatc 4070 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||| |||||||| ||||| || |||| |||||||||||||| ||||| Sbjct: 4069 ctcgagctgcttgccagcgaaaatgaracgctgctggtccggggggat 4022 Score = 99.6 bits (50), Expect = 6e-18 Identities = 75/84 (89%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||||| ||||||||| ||||||||||||||||||||||| || || || |||||||| Sbjct: 3901 gagcaccaggtggagggtggactccttctggatgttgtagtcagctagggtacggccatc 3842 Query: 296 ctcaagctgcttaccagcaaagat 319 ||| |||||||| |||||||| || Sbjct: 3841 ctcgagctgcttgccagcaaarat 3818
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 161 bits (81), Expect = 2e-36 Identities = 147/169 (86%) Strand = Plus / Minus Query: 176 tgtgagcccagagacataagcagctccatggccaagcacttacaggccaccacggaggcg 235 ||||| ||| |||||| ||||| | |||| ||| |||||||| ||||||||| ||||| Sbjct: 555 tgtgaaccctgagacagaagcaacgtcatgaccaggcacttacttgccaccacgcaggcg 496 Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 ||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 495 aagcaccaggtgaagggtagactccttctggatgttgtagtctgccagagtgcggccatc 436 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| || || || |||||||||||||||||||| |||||| Sbjct: 435 ctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatg 387 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||||| |||||| || ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 267 gagcaccaggtggagagtggactccttctggatgttatagtcagccagggtgcggccatc 208 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 207 ctcgagctgcttgccagcaaagatgaggcgctgctggtccggagggatg 159 Score = 75.8 bits (38), Expect = 8e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgta 274 ||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||| Sbjct: 54 gccaccacgaaggcggagcaccaggtgaagggtggactccttctggatgttgta 1
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 159 bits (80), Expect = 7e-36 Identities = 113/124 (91%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 539 gccacccctgaggcggagcaccaggtggagggtgctctccttctggatgttgtagtccgc 480 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 479 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtccggtgg 420 Query: 341 gatg 344 |||| Sbjct: 419 gatg 416 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| | ||| |||||||||| ||||||||| |||||||||||||||||| ||||| Sbjct: 311 gccacccctgagacggagcaccaggtggagggtgctctccttctggatgttgtaatccgc 252 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||||||||| |||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 251 aagggtgcggccatcctccagctgcttgccagcgaagatcaaacgctgctggtccggtgg 192 Query: 341 gatg 344 |||| Sbjct: 191 gatg 188 Score = 111 bits (56), Expect = 1e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | |||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 1003 acttactgaccaccacggaggcggagcaccaggtggagggtgctctccttttggatgttg 944 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || | |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 943 tagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 884 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 883 tccggggggatg 872 Score = 99.6 bits (50), Expect = 6e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct: 731 ctccttctggatgttgtagtccgcgagggtgcgaccatcctccagctgcttgccagcaaa 672 Query: 317 gatgaggcgctgctggtc 334 ||| || ||||||||||| Sbjct: 671 gatcagacgctgctggtc 654 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| | |||||||||||||||||| ||||| ||||| Sbjct: 74 gaggcgcagcaccaagtggagggtgctcagcttctggatgttgtagtcggccagcgtgcg 15
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 215 ttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgta 274 |||| ||||||||||||| |||||||||| |||||| || |||||||||||||||||||| Sbjct: 2720 ttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttgta 2661 Query: 275 gtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 ||| ||||| |||||||||||||| |||||||| || || |||||||| ||||||||||| Sbjct: 2660 gtctgccagggtgcggccatcctccagctgcttgccggcgaagatgagacgctgctggtc 2601 Query: 335 cggtgggatg 344 ||| |||||| Sbjct: 2600 cggggggatg 2591 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 233 gcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcc 292 ||||||||||| ||| ||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 2474 gcggagcaccaggtgaagggtggactccttctggatgttgtagtctgctagggtgcggcc 2415 Query: 293 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||||||| |||||||| || || ||||||||||| || ||||| Sbjct: 2414 atcctcaagctgcttgccagcaaaaataagacgctgctggtctggggggat 2364 Score = 111 bits (56), Expect = 1e-21 Identities = 82/91 (90%) Strand = Plus / Minus Query: 253 tcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccag 312 |||||||| |||||||||||||||| || || |||||||||||||| |||||||| |||| Sbjct: 2226 tcgactccntctggatgttgtagtcagcgagggtgcggccatcctcgagctgcttgccag 2167 Query: 313 caaagatgaggcgctgctggtccggtgggat 343 | |||||||| |||||||||||||| ||||| Sbjct: 2166 cgaagatgagacgctgctggtccggggggat 2136 Score = 99.6 bits (50), Expect = 6e-18 Identities = 88/102 (86%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||||| ||||| ||| ||||||||||||||||||||||| | || || |||||||| Sbjct: 2015 gagcaccaggtggasggtggactccttctggatgttgtagtcarctagggtacggccatc 1956 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||| |||||||| ||||||||||| || | |||||| ||||| Sbjct: 1955 ctcgagctgcttgccagcaaagatcagcctctgctgatccgg 1914
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 153 bits (77), Expect = 4e-34 Identities = 107/117 (91%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 386 cggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtg 327 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| ||||| ||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 326 cggccgtcctcgagctgcttaccggcgaagatgaggcgctgctggtccggcgggatg 270
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 138341 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagggtg 138282 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 138281 cggccatcctccagctgcttccccgcgaagatgaggcgctgctggtccggagggat 138226 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 144048 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagggtg 143989 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| || || |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 143988 cggccgtcatccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 143933
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 18495911 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagggtg 18495852 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 18495851 cggccatcctccagctgcttccccgcgaagatgaggcgctgctggtccggagggat 18495796 Score = 143 bits (72), Expect = 4e-31 Identities = 111/124 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| ||||||||||| || | |||||| || ||||||||||||||||||||||| || Sbjct: 22391704 gccaccgcggaggcggaggacgaggtggagcgtggactccttctggatgttgtagtcggc 22391645 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 22391644 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtccggagg 22391585 Query: 341 gatg 344 |||| Sbjct: 22391584 gatg 22391581 Score = 141 bits (71), Expect = 2e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||| || |||||||||||||| ||||||||||| || Sbjct: 16920269 gccaccgcggaggcggagcaccaggtgaagcgtcgactccttctgaatgttgtagtcggc 16920210 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || |||||||| |||||||||||||| || Sbjct: 16920209 cagggtgcggccatcctcgagctgcttccccgcgaagatgagacgctgctggtccggcgg 16920150 Query: 341 gat 343 ||| Sbjct: 16920149 gat 16920147 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 18501618 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagggtg 18501559 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| || || |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 18501558 cggccgtcatccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 18501503 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 15107632 accaagtgaagagttgactccttctgaatgttgtagtcggccagtgtgcgcccatcttcc 15107573 Query: 300 agctgctt 307 |||||||| Sbjct: 15107572 agctgctt 15107565
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 149 bits (75), Expect = 7e-33 Identities = 111/123 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 976 ccaccacgaaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 917 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| ||||||||||| |||||||| || || ||||||||||| ||||||||||| ||| Sbjct: 916 agagtacggccatcctcgagctgcttgccggcgaagatgaggcgttgctggtccggcggg 857 Query: 342 atg 344 ||| Sbjct: 856 atg 854
>ref|XM_391117.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10941.1) partial mRNA Length = 465 Score = 147 bits (74), Expect = 3e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||| | Sbjct: 227 ccaccacgaaggcggaggaccaagtgaagggtggactccttctggatgttgtagtcgctc 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||||||||||||||| || |||||||||||||| ||| Sbjct: 167 agggtgcggccatcctcgagctgcttaccagcaaagataagtcgctgctggtccgggggg 108 Query: 342 at 343 || Sbjct: 107 at 106
>gb|U86866.1|ACU86866 Actinidia chinensis polyubiquitin (ACU2) mRNA, partial cds Length = 173 Score = 147 bits (74), Expect = 3e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 124 ccaccacggaggcggagaaccaagtggagggtcgattccttctggatgttgtaatccgcg 65 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||||||||| || || |||||||| || | |||||| ||||||||| Sbjct: 64 agggtgcggccatcctcaagctgtttgccggcaaagatcagcctctgctgatccggtggg 5 Query: 342 at 343 || Sbjct: 4 at 3
>ref|XM_475630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 221 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 162 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 161 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggat 106
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 934 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 878 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1390 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 1389 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 1337 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 251 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 250 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 191 Query: 341 gatg 344 |||| Sbjct: 190 gatg 187 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1162 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1161 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1102 Query: 342 atg 344 ||| Sbjct: 1101 atg 1099 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 479 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 478 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 419 Query: 341 gatg 344 |||| Sbjct: 418 gatg 415 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 732 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 673 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 672 aagatgagacgctgctggtccgg 650
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 931 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 930 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 875 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1387 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 1386 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 1334 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 307 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 248 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 247 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 188 Query: 341 gatg 344 |||| Sbjct: 187 gatg 184 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1159 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1158 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1099 Query: 342 atg 344 ||| Sbjct: 1098 atg 1096 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 535 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 476 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 475 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 416 Query: 341 gatg 344 |||| Sbjct: 415 gatg 412 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 729 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 670 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 669 aagatgagacgctgctggtccgg 647
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 104719 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 104660 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 104659 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggat 104604
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 40868 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 40809 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 40808 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggat 40753
>gb|DQ445914.1| Gladiolus grandiflorus polyubiquitin (UBQ) gene, promoter region and partial cds Length = 2392 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||||||||| ||||| || || || ||||||||||||||||||||||| || Sbjct: 2134 ccaccacggaggcggaggaccaaatgaagtgtagactccttctggatgttgtagtcggca 2075 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||||||||||||| ||||||||||| || | |||||||||||| Sbjct: 2074 agagtgcggccatcctcaagctgctttccagcaaagattagcctctgctggtccgg 2019 Score = 75.8 bits (38), Expect = 8e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||| |||||||| || |||||||||||||| | |||||| |||||| Sbjct: 2329 gactccttctggatgttatagtccgcaagggtgcggccatcctccaactgcttgccagca 2270 Query: 315 aa 316 || Sbjct: 2269 aa 2268
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 42519 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 42460 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 42459 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggat 42404
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 3475237 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 3475178 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 3475177 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggat 3475122 Score = 113 bits (57), Expect = 4e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||||||||||| |||||| ||| ||| | ||| |||||||||||||||||| Sbjct: 8544588 acttacaggccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttg 8544647 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 || | || | |||||||||||||| |||||||| ||||||||||| || |||||||| Sbjct: 8544648 taacctgctaaggtgcggccatcctcgagctgcttgccagcaaagatcagtcgctgctga 8544707 Query: 333 tccgg 337 ||||| Sbjct: 8544708 tccgg 8544712 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 22310754 cggaggcggagcaccaggtgaagcgtcgactccttctggatgttgtagtcggccagcgtg 22310813 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | ||| || || |||||||| || || |||||||| |||||||| ||||| ||||| Sbjct: 22310814 cagccgtcttccagctgcttccccgcgaagatgagccgctgctgatccggcgggat 22310869 Score = 97.6 bits (49), Expect = 2e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||| ||||| |||||||||||||| |||||||| ||||| ||||| || || Sbjct: 8544839 gagcactaggtgaagggtagactccttctggatattgtagtcagccagggtgcgtccgtc 8544898 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 8544899 cttgagctgcttgccggcgaagatgaggcgctgctggtccggggggatg 8544947 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||| ||||| |||||||| || || || ||||| || |||||||| || Sbjct: 8545307 gtggagggtggactctttctgaatgttgtaatctgcgagggtgcgtccgtcctcaagttg 8545366 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| || ||||||||||||||||||||||| ||||| Sbjct: 8545367 cttgcccgcaaagatgaggcgctgctggtcaggtgg 8545402 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 267 atgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagat 319 |||||||||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 8545098 atgttgtagtccgccaaggtccgaccatcctcaagctgcttgccagcaaagat 8545150
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 3341105 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 3341164 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 3341165 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 3341220 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 3340649 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 3340708 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 3340709 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 3340761 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 3341788 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 3341847 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 3341848 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 3341907 Query: 341 gatg 344 |||| Sbjct: 3341908 gatg 3341911 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 3340877 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 3340936 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 3340937 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 3340996 Query: 342 atg 344 ||| Sbjct: 3340997 atg 3340999 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 3341560 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 3341619 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 3341620 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 3341679 Query: 341 gatg 344 |||| Sbjct: 3341680 gatg 3341683 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 3341366 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 3341425 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 3341426 aagatgagacgctgctggtccgg 3341448
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 3696 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 3637 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 3636 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 3581 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 4152 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 4093 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 4092 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 4040 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 3013 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 2954 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 2953 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 2894 Query: 341 gatg 344 |||| Sbjct: 2893 gatg 2890 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 3924 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggca 3865 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 3864 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 3805 Query: 342 atg 344 ||| Sbjct: 3804 atg 3802 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 3241 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 3182 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 3181 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 3122 Query: 341 gatg 344 |||| Sbjct: 3121 gatg 3118 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 3435 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 3376 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 3375 aagatgagacgctgctggtccgg 3353
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 143 bits (72), Expect = 4e-31 Identities = 111/124 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||| || Sbjct: 208 gccaccacggaggcgcagcacaaggtgaagggtcgactccttctggatgttgtagtcagc 149 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||| ||||| |||||||| || || ||||||||||||||||| ||||| || Sbjct: 148 cagggtgcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctgatccggggg 89 Query: 341 gatg 344 |||| Sbjct: 88 gatg 85 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 414 agggttgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 355 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 354 ccggcgaagatgaggcgctgctgatccggggggatg 319
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 143 bits (72), Expect = 4e-31 Identities = 111/124 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| ||||||||||| || | |||||| || ||||||||||||||||||||||| || Sbjct: 28193 gccaccgcggaggcggaggacgaggtggagcgtggactccttctggatgttgtagtcggc 28134 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 28133 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtccggagg 28074 Query: 341 gatg 344 |||| Sbjct: 28073 gatg 28070
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 89965 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 90024 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 90025 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 90080 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 89509 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 89568 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 89569 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 89621 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 90648 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 90707 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 90708 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 90767 Query: 341 gatg 344 |||| Sbjct: 90768 gatg 90771 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 89737 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 89796 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 89797 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 89856 Query: 342 atg 344 ||| Sbjct: 89857 atg 89859 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 90420 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 90479 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 90480 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 90539 Query: 341 gatg 344 |||| Sbjct: 90540 gatg 90543 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 90226 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 90285 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 90286 aagatgagacgctgctggtccgg 90308
>dbj|AK119731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-158-A01, full insert sequence Length = 735 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||| Sbjct: 291 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtg 232 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 231 cggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggggat 176
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 934 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 878 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1390 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 1389 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 1337 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 251 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 250 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 191 Query: 341 gatg 344 |||| Sbjct: 190 gatg 187 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1162 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1161 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1102 Query: 342 atg 344 ||| Sbjct: 1101 atg 1099 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 479 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 478 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 419 Query: 341 gatg 344 |||| Sbjct: 418 gatg 415 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 732 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 673 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 672 aagatgagacgctgctggtccgg 650
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 143 bits (72), Expect = 4e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 931 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 930 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 875 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1387 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 1386 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 1334 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 307 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 248 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 247 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 188 Query: 341 gatg 344 |||| Sbjct: 187 gatg 184 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1159 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||| ||||||||||| || ||| Sbjct: 1158 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1099 Query: 342 atg 344 ||| Sbjct: 1098 atg 1096 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 535 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 476 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || || | ||||||||| |||||||| || || |||||||| ||||||||||| Sbjct: 475 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtc 422 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 729 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 670 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 669 aagatgagacgctgctggtccgg 647
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 143 bits (72), Expect = 4e-31 Identities = 111/124 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| ||||| |||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 786 gccaccgcggagtcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 727 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 726 gagggtgcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtccggcgg 667 Query: 341 gatg 344 |||| Sbjct: 666 gatg 663
>dbj|AB047856.1| Oryza sativa Ub-CEP52-2 gene for ubiquitin fused to ribosomal protein L40, complete cds Length = 3060 Score = 143 bits (72), Expect = 4e-31 Identities = 111/124 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| ||||||||||| || | |||||| || ||||||||||||||||||||||| || Sbjct: 1289 gccaccgcggaggcggaggacgaggtggagcgtggactccttctggatgttgtagtcggc 1230 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 1229 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtccggagg 1170 Query: 341 gatg 344 |||| Sbjct: 1169 gatg 1166
>gb|BT017060.1| Zea mays clone EL01N0358B03.c mRNA sequence Length = 795 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||||| ||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 320 gaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcg 261 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||| |||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 260 gccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggcgggatg 206
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 782 gaggcggagcaccaggtggagggtgctctccttctggatgttgtagtcggccagggtgcg 723 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| |||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 722 gccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatg 668 Score = 99.6 bits (50), Expect = 6e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct: 983 ctccttctggatgttgtagtccgcgagggtgcgaccatcctccagctgcttgccagcaaa 924 Query: 317 gatgaggcgctgctggtc 334 ||| || ||||||||||| Sbjct: 923 gatcagacgctgctggtc 906 Score = 95.6 bits (48), Expect = 9e-17 Identities = 111/132 (84%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||||||| Sbjct: 1255 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 1196 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || | |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 1195 tagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 1136 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 1135 tccggggggatg 1124 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtc 277 |||||||||||| | ||||||||| ||||||||||||||||||||| Sbjct: 554 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtc 507
>gb|AY034031.1| Alstroemeria hybrid cultivar 'Samora' ubiquitin mRNA, partial cds Length = 278 Score = 141 bits (71), Expect = 2e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||||||| |||||||||| |||||||||||||||||||| || ||| Sbjct: 146 ccaccacggagacggagcaccgagtggagggtggactccttctggatgttgtaatcagcc 87 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || || || ||||||||||||||||| || ||||||||||| ||||||||||| || ||| Sbjct: 86 agggtacgcccatcctcaagctgcttgccggcaaagatgagacgctgctggtcagggggg 27 Query: 342 atg 344 ||| Sbjct: 26 atg 24
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 141 bits (71), Expect = 2e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||| || |||||||||||||| ||||||||||| || Sbjct: 50082 gccaccgcggaggcggagcaccaggtgaagcgtcgactccttctgaatgttgtagtcggc 50023 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || |||||||| |||||||||||||| || Sbjct: 50022 cagggtgcggccatcctcgagctgcttccccgcgaagatgagacgctgctggtccggcgg 49963 Query: 341 gat 343 ||| Sbjct: 49962 gat 49960
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 141 bits (71), Expect = 2e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 279 ccaccacgcaggcggagcacgaggtggagggtcgactccttctggatgttgtagtccgaa 220 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||| ||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 219 agggtgcggccgtcctcgagctgcttaccggcgaagataaggcgctgctggtcagggggg 160 Query: 342 atg 344 ||| Sbjct: 159 atg 157
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||||||||| ||||| ||||||||||| ||||||||||| || || ||||| Sbjct: 17347 gaggcggagcaccaagtgtagggtagactccttctgaatgttgtagtcggcaagggtgcg 17288 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||| |||||||||||||| |||||||| | |||||||||||| |||||| Sbjct: 17287 gccatcctccagctgcttaccagcgaagatgagtctctgctggtccggggggatg 17233 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 ||||||||||| || | ||||||||| || |||||||||||||||||||| || || ||| Sbjct: 16665 cggaggcggaggacaaggtggagggtggattccttctggatgttgtagtcagcaagcgtg 16606 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 16605 cgcccatcttcaagctgcttgccagcgaagatgagacgctgctggtccggtgggat 16550 Score = 105 bits (53), Expect = 9e-20 Identities = 92/105 (87%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||||| ||||||||| ||||||||||| ||||||||||| || || || || Sbjct: 17575 gaggcggagcaccaggtggagggtagactccttctgaatgttgtagtcggcgagggtacg 17516 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 |||||| || |||||||| || || ||||| |||||||||||||| Sbjct: 17515 gccatcttccagctgcttgccggcgaagatcaggcgctgctggtc 17471 Score = 93.7 bits (47), Expect = 4e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 |||||||| || | ||| ||||| ||||||||||||||||||||||| || || || | Sbjct: 16890 aggcggagaacaaggtgaagggtggactccttctggatgttgtagtcagcaagggtccta 16831 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 16830 ccatcctcgagctgcttgccagcaaagatcagacgctgctggtccgg 16784 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||||||||||||||| || || || | ||||||||| |||||||| Sbjct: 17100 agggtggactccttctggatgttgtagtcagcgagggtcctgccatcctccagctgcttg 17041 Query: 309 ccagcaaagatgaggcgctgctg 331 || ||||| || || |||||||| Sbjct: 17040 ccggcaaaaataagacgctgctg 17018
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 139 bits (70), Expect = 7e-30 Identities = 103/114 (90%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| ||||| || | |||||| |||||||||||||||||||||||||| || Sbjct: 2329 gccaccacggagacggaggacgaggtggagagtcgactccttctggatgttgtagtcggc 2270 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 2269 gagcgtgcggccgtcctcaagctgcttaccggcgaagatgaggcgctgctggtc 2216 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||||||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 2077 gtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcctcgagctg 2018 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||| || |||||||| |||||||| || || |||||| Sbjct: 2017 cttaccggcgaagatgagacgctgctgatcgggagggatg 1978
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 139 bits (70), Expect = 7e-30 Identities = 109/122 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 430 ccaccacggagacggaggaccaagtgaagggtggactccttctggatgttgtagtcagcc 371 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | |||||||||||||||||||||||| ||||| ||||| || | |||||| || |||||| Sbjct: 370 aaagtgcggccatcctcaagctgctttccagcgaagataagcctctgctgatctggtggg 311 Query: 342 at 343 || Sbjct: 310 at 309 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| || | ||| || ||||||||||||||||| |||||||| ||| Sbjct: 886 ccaccacggagacggaggacaaggtgaagagtcgactccttctggatattgtagtcggcc 827 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || || || ||||||||||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 826 agggtacgaccatcctcaagctgcttaccagcgaagatgagcctctgctggtccggtggg 767 Query: 342 at 343 || Sbjct: 766 at 765 Score = 109 bits (55), Expect = 6e-21 Identities = 94/107 (87%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 |||||||| || || |||||||| ||||| ||||||||||| |||| ||||| |||||| Sbjct: 643 agcaccaaatgcagagtcgactctttctgaatgttgtagtcggccaaggtgcgaccatcc 584 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||||||||| |||||||| | ||||||||| |||||||| Sbjct: 583 tcaagctgcttaccagcgaagatgagcctctgctggtctggtgggat 537 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| || |||||||| ||||||||||| |||| ||| ||||||||||| || ||||| Sbjct: 175 agggtggattccttctgaatgttgtagtcagccaaagtacggccatcctcgagttgcttt 116 Query: 309 ccagcaaagatgaggcgctgctggtc 334 ||||| |||||||| | ||||||||| Sbjct: 115 ccagcgaagatgagcctctgctggtc 90
>gb|AY086967.1| Arabidopsis thaliana clone 3001 mRNA, complete sequence Length = 929 Score = 139 bits (70), Expect = 7e-30 Identities = 109/122 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 749 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 690 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 689 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccggaggg 630 Query: 342 at 343 || Sbjct: 629 at 628 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| ||||||||||||||||| |||||||| || |||| || || |||||||| Sbjct: 503 accaagtgaagggtcgactccttctgaatgttgtaatcagccaaggtacgaccatcctcc 444 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | ||| ||||| || ||||| | | |||||||||||| ||||| Sbjct: 443 aactgtttaccggcgaagatcaacctctgctggtccggagggat 400 Score = 52.0 bits (26), Expect = 0.001 Identities = 66/80 (82%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| || | ||| ||||| |||||||| || ||||||||||| ||||| || |||| Sbjct: 290 ccacgcagackgagaaccaaatggagggtggattccttctggatattgtaatcagccaac 231 Query: 285 gtgcggccatcctcaagctg 304 || ||||||||||| ||||| Sbjct: 230 gtacggccatcctctagctg 211
>gb|AY099118.1| Chlorarachnion CCMP621 isolate pub1 polyubiquitin mRNA, complete cds Length = 1106 Score = 139 bits (70), Expect = 7e-30 Identities = 100/110 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| || | ||| || |||||||||||||||||||||||||| ||| Sbjct: 968 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgcc 909 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 908 agtgtgcgaccatcctcaagctgcttaccagcgaagatgaggcgctgctg 859 Score = 139 bits (70), Expect = 7e-30 Identities = 100/110 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| || | ||| || |||||||||||||||||||||||||| ||| Sbjct: 737 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgcc 678 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 677 agtgtgcgaccatcctcaagctgcttaccagcgaagatgaggcgctgctg 628 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| || | ||| || |||||||||||||||||||||||||| ||| Sbjct: 506 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgcc 447 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 446 agtgtgcgaccgtcctcaagctgcttaccagcgaagatgaggcgctgctg 397 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| || | ||| || |||||||||||||||||||||||||| ||| Sbjct: 275 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgcc 216 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 215 agtgtgcgaccgtcctcaagctgcttaccagcgaagatgaggcgctgctg 166
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 139 bits (70), Expect = 7e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 215 ttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgta 274 |||| ||||||| || ||||| || || | ||||||||| || ||||||||||||||||| Sbjct: 956 ttactggccaccgcgcaggcgaaggacgaggtggagggttgattccttctggatgttgta 897 Query: 275 gtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 |||||||||||||||||| ||||| | ||||||||| ||||||||||| ||||||||||| Sbjct: 896 gtccgccagagtgcggccgtcctccaactgcttaccggcaaagatgagccgctgctggtc 837 Query: 335 cggtgggatg 344 ||| |||||| Sbjct: 836 cggcgggatg 827 Score = 133 bits (67), Expect = 4e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 718 ccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtagtccgccaga 659 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| ||||| | |||||| || || ||||| || |||||||||||||| ||||| Sbjct: 658 gtgcggccgtcctccaactgcttgcctgcgaagatcagacgctgctggtccggcgggat 600 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| |||||||| | |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 490 ccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtagtccgcaaga 431 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| ||||| | |||||| || || ||||| || |||||||||||||| ||||| Sbjct: 430 gtgcggccgtcctccaactgcttgcctgcgaagatcagacgctgctggtccggggggat 372 Score = 109 bits (55), Expect = 6e-21 Identities = 103/119 (86%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| ||||| || | |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 262 ccacggagacggaggacgaggtggagcgtcgactccttctggatgttgtagtccgcgaga 203 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| ||||| | |||||| || || ||||| | |||||||||||||| ||||| Sbjct: 202 gtgcggccgtcctccaactgcttgccggcgaagatcaaccgctgctggtccggggggat 144
>gb|U84968.1|ATU84968 Arabidopsis thaliana ubiquitin (UBQ11) gene, complete cds Length = 1368 Score = 139 bits (70), Expect = 7e-30 Identities = 109/122 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1367 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1308 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 1307 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccggaggg 1248 Query: 342 at 343 || Sbjct: 1247 at 1246 Score = 79.8 bits (40), Expect = 5e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 227 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | || ||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 167 aacgtacggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 112 Score = 75.8 bits (38), Expect = 8e-11 Identities = 77/90 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || ||| Sbjct: 878 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggca 819 Query: 315 aagatgaggcgctgctggtccggtgggatg 344 ||||| | | |||||||||||| |||||| Sbjct: 818 aagatcaacctctgctggtccggagggatg 789 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||||||| Sbjct: 665 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcctca 606 Query: 300 ag 301 || Sbjct: 605 ag 604 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| ||||| ||||||||||| |||||||| || |||| || || |||||||| Sbjct: 1122 caccaagtgaagggtggactccttctgaatgttgtaatcagccaaggtacgaccatcctc 1063 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | ||| ||||| || ||||| | | |||||||||||| ||||| Sbjct: 1062 caactgtttaccggcgaagatcaacctctgctggtccggagggat 1018 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 428 agggttgactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 369 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| | | |||||||||||| Sbjct: 368 ccggcgaagatcaacctctgctggtccgg 340
>gb|AY072820.1| Oryza sativa ubiquitin mRNA, partial cds Length = 394 Score = 137 bits (69), Expect = 3e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 188 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 129 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 128 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtc 76
>ref|NM_001036508.1| Arabidopsis thaliana UBQ11 (UBIQUITIN 11); protein binding AT4G05050 (UBQ11) transcript variant AT4G05050.2 mRNA, complete cds Length = 1136 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 862 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 803 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 802 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 747 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 406 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 347 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 346 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 291 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 601 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 542 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 541 aagatcaacctctgctggtccgg 519
>ref|NM_116744.2| Arabidopsis thaliana UBQ11 (UBIQUITIN 11); protein binding AT4G05050 (UBQ11) transcript variant AT4G05050.1 mRNA, complete cds Length = 1025 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 751 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 692 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 691 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 636 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 295 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 236 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 235 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 180 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 490 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 431 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 430 aagatcaacctctgctggtccgg 408
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| | |||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 265 gccacccctgaggcggagcaccaagtggagggtgctctccttctggatgttgtagtcagc 206 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| |||||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 205 caaggtgcgaccatcctccagctgcttgccggcgaagatgagccgctgctggtccggtgg 146 Query: 341 gatg 344 |||| Sbjct: 145 gatg 142 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 233 gcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcc 292 ||||||||||| ||||||||| ||||||||||||||||||||| || || || ||||| Sbjct: 481 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 422 Query: 293 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 421 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggtgg 374 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||||| |||||| || ||||||||||||||||||||| || Sbjct: 720 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 661 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct: 660 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgctggtctgggggg 601 Query: 342 atg 344 ||| Sbjct: 600 atg 598
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 318 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 259 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| |||||||| || || ||||| || |||||||||||||| || Sbjct: 258 gagggtgcggccgtcctcgagctgcttgccggcgaagattagccgctgctggtccggcgg 199 Query: 341 gatg 344 |||| Sbjct: 198 gatg 195
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 120293 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 120352 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 120353 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 120408 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 120749 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 120808 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 120809 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 120864 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 120554 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 120613 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 120614 aagatcaacctctgctggtccgg 120636
>gb|AY098958.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 690 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 683 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 624 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 623 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 568 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 227 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 167 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 112 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 422 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 363 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 362 aagatcaacctctgctggtccgg 340
>gb|AF056623.1|AF056623 Magnaporthe grisea strain Guy-11 ubiquitin fusion protein (UEP1) mRNA, complete cds Length = 620 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 236 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtagtcggag 177 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| ||||| ||||| |||||||| ||||||||||| || ||||| |||||||| Sbjct: 176 agagtacggccgtcctccagctgcttgccagcaaagataagacgctgttggtccgg 121
>gb|AF386524.1|AF386524 Pyrus communis ubiquitin extension protein (UBI) mRNA, complete cds Length = 651 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| |||||| || ||||||||||||||||||||||| || Sbjct: 233 gccaccgcggaggcggagcaccaggtggagagtggactccttctggatgttgtagtcggc 174 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || ||||| ||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 173 gagggttcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtccggggg 114 Query: 341 gatg 344 |||| Sbjct: 113 gatg 110
>gb|AY057530.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 929 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 749 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 690 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 689 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 634 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 293 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 234 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 233 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 178 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 488 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 429 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 428 aagatcaacctctgctggtccgg 406
>gb|AY054281.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 884 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 749 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 690 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 689 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 634 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 293 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 234 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 233 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 178 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 488 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 429 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 428 aagatcaacctctgctggtccgg 406
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| | |||||||||||||| |||||| || |||||||||||||||||| ||||| Sbjct: 3133 gccacccctgaggcggagcaccaggtggagagtgctctccttctggatgttgtaatccgc 3074 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| |||||||| || || |||||||||||||||||||| ||||| Sbjct: 3073 cagggtgcggccatcctccagctgcttgccggcgaagatgaggcgctgctggtcgggtgg 3014 Query: 341 gatg 344 |||| Sbjct: 3013 gatg 3010 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 2440 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 2381 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 2380 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatg 2326 Score = 121 bits (61), Expect = 2e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 2668 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 2609 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 2608 cccgtcctcaagctgctttccagcaaagatgagccgctgctggtc 2564 Score = 117 bits (59), Expect = 2e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||||| ||||||||| |||||||||||||||||| ||||| || ||||||||| Sbjct: 2892 cggagcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggcca 2833 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| |||||||| ||||| ||||| | ||||||||||||||||||||| Sbjct: 2832 tcctccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatg 2782 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 3325 ctccttctggatgttgtagtccgcgagagtgcggccatcctccagctgcttgcccgcaaa 3266 Query: 317 gatgaggcgctgctggtc 334 ||| || ||||||||||| Sbjct: 3265 gatcagacgctgctggtc 3248 Score = 103 bits (52), Expect = 4e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||||||| Sbjct: 3597 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 3538 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || || |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 3537 tagtctgctagggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 3478 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 3477 tccggggggatg 3466 Score = 101 bits (51), Expect = 1e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||| | ||||||||| ||||||||||||||||||||| || || ||||| || Sbjct: 2208 cggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcgcccg 2149 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||||| || |||||||||||||| ||||||||||| || |||||| Sbjct: 2148 tcctcaagctgtttgccagcaaagatgagccgctgctggtctggggggatg 2098
>gb|AY052661.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 958 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 751 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 692 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 691 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 636 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 295 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 236 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 235 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 180 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 490 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 431 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 430 aagatcaacctctgctggtccgg 408
>gb|DQ066288.1| Ixodes scapularis isolate is-all-426 ubiquitin/ribosomal protein S27a fusion protein mRNA, complete cds Length = 471 Score = 135 bits (68), Expect = 1e-28 Identities = 107/120 (89%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 224 ccacgcaggcgcagcaccaggtggagggtcgactccttctggatgttgtagtccgacagg 165 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| |||||||| |||||||| || |||||||| || ||||||||||| || |||||| Sbjct: 164 gtgcgcccatcctccagctgcttgcccgcaaagatcagacgctgctggtcgggggggatg 105
>dbj|AK103890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150D17, full insert sequence Length = 783 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 300 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagggtg 241 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| || || |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 240 cggccgtcatccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 185
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtcagc 251 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 250 aagggtcctgccatcctccagctgcttgccagcgaagatgagacgctgctggtccggggg 191 Query: 341 gatg 344 |||| Sbjct: 190 gatg 187 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| || Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcagc 479 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || | ||||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 478 aagggtcctgccatcctccagctgcttgccggcgaagatgagacgctgctggtctggggg 419 Query: 341 gatg 344 |||| Sbjct: 418 gatg 415 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||| ||| || | |||||||||||| ||||||||||||||||||||||| || Sbjct: 993 ccaccacagagacgaaacaccaagtggagaagtgactccttctggatgttgtagtcagca 934 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || | ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccgg 878 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || || | ||| |||||||||||||| || ||| Sbjct: 732 gactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagctgcttgccggca 673 Query: 315 aagatgaggcgctgctggtccgg 337 |||||||| |||||||||||||| Sbjct: 672 aagatgagacgctgctggtccgg 650
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 132816 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 132757 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 132756 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 132701 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1170 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1229 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1230 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1285 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 132360 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 132301 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 132300 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 132245 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1414 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 1473 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1474 caattgttttccggcaaagatcaacctctgctggtccggagggat 1518 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 2309 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 2368 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 2369 aacgtacggccatcctctagctgctt 2394 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 2108 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 2167 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 2168 ccggcgaagatcagcctctgctggtccgg 2196 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 1643 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 1702 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 1703 agttgctttccggcgaagatcaatctctgctggtccggtgggat 1746 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 132555 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 132496 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 132495 aagatcaacctctgctggtccgg 132473 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 1871 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 1930 Query: 300 ag 301 || Sbjct: 1931 ag 1932
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 Length = 80196 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 58768 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 58827 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 58828 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 58883 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 59224 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 59283 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 59284 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 59339 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 59029 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 59088 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 59089 aagatcaacctctgctggtccgg 59111
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 2156 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 2097 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| |||||||| || || ||||| || |||||||||||||| || Sbjct: 2096 gagggtgcggccgtcctcgagctgcttgccggcgaagattagccgctgctggtccggcgg 2037 Query: 341 gatg 344 |||| Sbjct: 2036 gatg 2033
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1134 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggc 1075 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| |||||||| || || ||||| || |||||||||||||| || Sbjct: 1074 gagggtgcggccgtcctcgagctgcttgccggcgaagattagccgctgctggtccggcgg 1015 Query: 341 gatg 344 |||| Sbjct: 1014 gatg 1011
>gb|L05362.1|ATHUBQB Arabidopsis thaliana (clone ubq11) polyubiquitin gene sequence Length = 871 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 737 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 678 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 677 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 622 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 281 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 222 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 221 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 166 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||||||||| ||||||| ||| | ||| |||||||| ||||| || || Sbjct: 476 gactccttctggatgttgtaatccgccaaagttctgccgtcctcaagttgctttccggcg 417 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 416 aagatcaacctctgctggtccgg 394
>gb|AF517839.1| Triticum aestivum ubiquitin protein mRNA, partial cds Length = 204 Score = 133 bits (67), Expect = 4e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 203 tggagggtggactccttctggatgttgtagtcagccagggtgcggccatcctcgagctgc 144 Query: 306 ttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || |||||||| ||||||||||||||||| |||||| Sbjct: 143 ttgccggcaaagatcaggcgctgctggtccggggggatg 105
>gb|AY066029.1| Branchiostoma belcheri tsingtaunese ubiquitin/ribosomal protein S27a fusion protein (Ubf80) mRNA, complete cds Length = 586 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | | Sbjct: 266 ccacctcggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcagac 207 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||| || |||||||| || |||||||| || | ||||||||| || ||| Sbjct: 206 agggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcaggaggg 147 Query: 342 atg 344 ||| Sbjct: 146 atg 144
>gb|AY103568.1| Zea mays PCO110021 mRNA sequence Length = 865 Score = 133 bits (67), Expect = 4e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||||| ||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 364 gaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcg 305 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||| ||||| || || || ||||||||||||||||||||||| |||||| Sbjct: 304 gccatcctcgagctgtttgccggcgaagatgaggcgctgctggtccggcgggatg 250
>gb|L31941.1|RICRMA630 Oryza sativa (clone rma630) ribosomal protein-linked ubiquitin mRNA, complete cds Length = 634 Score = 133 bits (67), Expect = 4e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 237 gccaccgcggaggcggagcacgtggtggagggtggactccttctggatgttgtagtcggc 178 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||||||||| |||||||| || || ||||||| ||||||||||||||| || Sbjct: 177 gagggtgcggccatcctcgagctgcttgccggcgaagatgaagcgctgctggtccggggg 118 Query: 341 gat 343 ||| Sbjct: 117 gat 115
>ref|NM_178961.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.3 mRNA, complete cds Length = 1499 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 1275 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 1216 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1215 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 1156 Query: 342 at 343 || Sbjct: 1155 at 1154 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 786 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 727 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 726 aagatcaacctctgctggtccgg 704 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 591 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatcagcc 532 Query: 282 agagtgcggccatcctcaagctg 304 | || ||||||||||| ||||| Sbjct: 531 aacgtacggccatcctctagctg 509 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 1044 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 985 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 984 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 926
>ref|NM_116523.2| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.1 mRNA, complete cds Length = 1202 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 978 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 919 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 918 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 859 Query: 342 at 343 || Sbjct: 858 at 857 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 489 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 430 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 429 aagatcaacctctgctggtccgg 407 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 294 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatcagcc 235 Query: 282 agagtgcggccatcctcaagctg 304 | || ||||||||||| ||||| Sbjct: 234 aacgtacggccatcctctagctg 212 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 747 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 688 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 687 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 629
>ref|NM_178960.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.2 mRNA, complete cds Length = 975 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 751 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 692 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 691 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 632 Query: 342 at 343 || Sbjct: 631 at 630 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 262 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 203 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 202 aagatcaacctctgctggtccgg 180 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 520 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 461 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 460 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 402
>ref|NM_192270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 218 caggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtc 277 |||||| || |||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct: 231 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 172 Query: 278 cgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| ||||| || ||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 171 ggccagcgtgcgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtccgg 112 Query: 338 tgggat 343 ||||| Sbjct: 111 cgggat 106
>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete sequence Length = 98527 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 75844 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 75903 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 75904 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 75963 Query: 342 at 343 || Sbjct: 75964 at 75965 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 76528 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatcagcc 76587 Query: 282 agagtgcggccatcctcaagctg 304 | || ||||||||||| ||||| Sbjct: 76588 aacgtacggccatcctctagctg 76610 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 76333 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 76392 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 76393 aagatcaacctctgctggtccgg 76415 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 76075 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 76134 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 76135 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 76193
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||||| ||||||||| |||||| ||||||||| Sbjct: 759 acttactgaccaccacggagacggagcaccaggtggagggtgctctccttttggatgttg 700 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 699 tagtcggccagcgtgcgcccgtcctcaagctgctttccagcaaagatgagccgctgctgg 640 Query: 333 tc 334 || Sbjct: 639 tc 638 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 514 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 455 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 454 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatg 400 Score = 101 bits (51), Expect = 1e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||| | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 286 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 227 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || ||||||||||| || ||||| |||||||| ||||||||||| || |||||| Sbjct: 226 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatg 172
>ref|XM_745059.1| Aspergillus fumigatus Af293 ubiquitin UbiA (Afu1g04040) partial mRNA Length = 675 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||| |||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 515 ccaccacgcagacggaggaccaggtggagggtggactccttctgaatgttgtagtcgctc 456 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 455 agggtgcggccatcctcaagctgcttaccagcgaagatcaggcgctgctggtcagggggg 396 Query: 342 at 343 || Sbjct: 395 at 394
>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7 Length = 199615 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 124514 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 124573 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 124574 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 124633 Query: 342 at 343 || Sbjct: 124634 at 124635 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 125198 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatcagcc 125257 Query: 282 agagtgcggccatcctcaagctg 304 | || ||||||||||| ||||| Sbjct: 125258 aacgtacggccatcctctagctg 125280 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 125003 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 125062 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 125063 aagatcaacctctgctggtccgg 125085 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 124745 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 124804 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 124805 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 124863
>gb|AY042884.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 927 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 750 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 691 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 690 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 631 Query: 342 at 343 || Sbjct: 630 at 629 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 261 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 202 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 201 aagatcaacctctgctggtccgg 179 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 519 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 460 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 459 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 401
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 218 caggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtc 277 |||||| || |||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct: 25761108 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 25761049 Query: 278 cgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| ||||| || ||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 25761048 ggccagcgtgcgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtccgg 25760989 Query: 338 tgggat 343 ||||| Sbjct: 25760988 cgggat 25760983 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||| Sbjct: 12628958 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 12629017 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| Sbjct: 12629018 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggat 12629073 Score = 117 bits (59), Expect = 2e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 25765520 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtg 25765461 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggga 342 ||||| ||||| |||||||| || || |||||||| |||||||||| ||| |||| Sbjct: 25765460 cggccgtcctccagctgcttgccggcgaagatgagccgctgctggtgcggcggga 25765406
>gb|AY087759.1| Arabidopsis thaliana clone 38261 mRNA, complete sequence Length = 1190 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 979 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 920 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 919 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 860 Query: 342 at 343 || Sbjct: 859 at 858 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 490 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 431 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 430 aagatcaacctctgctggtccgg 408 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 295 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatcagcc 236 Query: 282 agagtgcggccatcctcaagctg 304 | || ||||||||||| ||||| Sbjct: 235 aacgtacggccatcctctagctg 213 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 748 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 689 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 688 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 630
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 218 caggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtc 277 |||||| || |||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct: 1032 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 973 Query: 278 cgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| ||||| || ||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 972 ggccagcgtgcgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtccgg 913 Query: 338 tgggat 343 ||||| Sbjct: 912 cgggat 907 Score = 117 bits (59), Expect = 2e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 5444 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtg 5385 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggga 342 ||||| ||||| |||||||| || || |||||||| |||||||||| ||| |||| Sbjct: 5384 cggccgtcctccagctgcttgccggcgaagatgagccgctgctggtgcggcggga 5330
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 218 caggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtc 277 |||||| || |||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct: 63572 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 63513 Query: 278 cgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| ||||| || ||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 63512 ggccagcgtgcgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtccgg 63453 Query: 338 tgggat 343 ||||| Sbjct: 63452 cgggat 63447 Score = 117 bits (59), Expect = 2e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 67984 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtg 67925 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggga 342 ||||| ||||| |||||||| || || |||||||| |||||||||| ||| |||| Sbjct: 67924 cggccgtcctccagctgcttgccggcgaagatgagccgctgctggtgcggcggga 67870
>gb|AF193438.1|AF193438 Hevea brasiliensis ubiquitin precursor (ubi) mRNA, complete cds Length = 1385 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || ||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 227 ccaccacgaagtcgaagcaccaagtggagggtggactccttctggatattgtagtctgca 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||| ||||||||||||||||| | | ||||||||| |||||| Sbjct: 167 agggtgcggccatcctcaagttgcttaccagcaaagatcaacctctgctggtctggtggg 108 Query: 342 at 343 || Sbjct: 107 at 106 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||||| ||||||||||| || || |||||||||||| Sbjct: 440 agcaccaagtggagggtggactccttctgaatgttgtagtctgcaagggtgcggccatcc 381 Query: 297 tcaagctgcttaccagcaaagat 319 ||||||||||||||||||||||| Sbjct: 380 tcaagctgcttaccagcaaagat 358 Score = 97.6 bits (49), Expect = 2e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||| || ||||| ||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 893 accaaatgaagggtggactccttctggatgttgtagtctgcaagggtgcggccatcctca 834 Query: 300 agctgcttaccagcaaa 316 |||||||| |||||||| Sbjct: 833 agctgctttccagcaaa 817 Score = 97.6 bits (49), Expect = 2e-17 Identities = 87/97 (89%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || || ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 684 gccaccacgaagtcgaagcaccaagtggagggtggactccttctgaatgttgtagtcagc 625 Query: 281 c-agagtgcggccatcctcaagctgcttaccagcaaa 316 | || ||||| ||||||||||||||||| |||||||| Sbjct: 624 caagggtgcgaccatcctcaagctgctt-ccagcaaa 589
>gb|BT001165.1| Arabidopsis thaliana Unknown protein (At4g02890) mRNA, complete cds Length = 787 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 683 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 624 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 623 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 564 Query: 342 at 343 || Sbjct: 563 at 562 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 194 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 135 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 134 aagatcaacctctgctggtccgg 112 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 452 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 393 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 392 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 334
>gb|L05394.1|ATHUBQ14G Arabidopsis thaliana polyubiquitin (ubq14) gene sequence Length = 1605 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 1382 ccaccacggagccttagcaccaagtgaagggtagactccttctggatgttgtagtcggcc 1323 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | ||| || |||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 1322 aaagtacgaccatcctcaagctgttttccagcgaagatgagacgctgctggtccggaggg 1263 Query: 342 at 343 || Sbjct: 1262 at 1261 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| ||||| Sbjct: 893 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccagcg 834 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 833 aagatcaacctctgctggtccgg 811 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 698 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatcagcc 639 Query: 282 agagtgcggccatcctcaagctg 304 | || ||||||||||| ||||| Sbjct: 638 aacgtacggccatcctctagctg 616 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| || | ||||||||| || || ||||||||||| ||||||||||| |||| | Sbjct: 1151 ccacggagacgcaacaccaagtgaagtgtagactccttctgaatgttgtagtcagccaaa 1092 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | ||||| ||||| || || || || ||||| | | |||||||||||||||||| Sbjct: 1091 gttctaccatcttcaagttgttttccggcgaagatcaatctctgctggtccggtgggat 1033
>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0085M22, complete sequence Length = 145104 Score = 129 bits (65), Expect = 6e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||| ||| || || ||||||||||||||||||||||| ||||| |||||| Sbjct: 4920 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtagtcggccagcgtgcgg 4861 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 4860 ccatcctccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 4808
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 6e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||| ||| || || ||||||||||||||||||||||| ||||| |||||| Sbjct: 8381377 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtagtcggccagcgtgcgg 8381318 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 8381317 ccatcctccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 8381265 Score = 101 bits (51), Expect = 1e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||||||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 7073921 gtggagggtggactccttctggatgttgtagtcagccagggtgcgtccgtcctccagctg 7073980 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||| || || ||||| || |||||||||||||| ||||| Sbjct: 7073981 cttcccggcgaagatcagccgctgctggtccggcgggat 7074019
>ref|XM_753494.1| Ustilago maydis 521 hypothetical protein (UM02440.1) partial mRNA Length = 387 Score = 129 bits (65), Expect = 6e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || |||||||| | |||||||||||| |||||||||||||||||||||| Sbjct: 227 ccaccacgcagacggagcacaaggtggagggtcgattccttctggatgttgtagtccgag 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 167 agggtgcggccatcctcgagctgcttaccggcgaagatcaggcgctgctggtc 115
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 129 bits (65), Expect = 6e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 217 acaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagt 276 |||||||||||||||| ||||| || | |||||||||||||||||||| |||||||||| Sbjct: 5073179 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 5073238 Query: 277 ccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccg 336 | || || ||||| || ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 5073239 cagcaagggtgcgtccttcctcgagctgcttgccagcgaagatgaggcgctgctggtccg 5073298 Query: 337 g 337 | Sbjct: 5073299 g 5073299
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 6e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||| ||| || || ||||||||||||||||||||||| ||||| |||||| Sbjct: 8379212 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtagtcggccagcgtgcgg 8379153 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 8379152 ccatcctccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 8379100 Score = 101 bits (51), Expect = 1e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||||||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 7071816 gtggagggtggactccttctggatgttgtagtcagccagggtgcgtccgtcctccagctg 7071875 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||| || || ||||| || |||||||||||||| ||||| Sbjct: 7071876 cttcccggcgaagatcagccgctgctggtccggcgggat 7071914
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 129 bits (65), Expect = 6e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||| ||| || || ||||||||||||||||||||||| ||||| |||||| Sbjct: 118633 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtagtcggccagcgtgcgg 118574 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 118573 ccatcctccagctgcttcccggcgaagatgaggcgctgctggtccggcgggat 118521
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 129 bits (65), Expect = 6e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 217 acaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagt 276 |||||||||||||||| ||||| || | |||||||||||||||||||| |||||||||| Sbjct: 110736 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 110795 Query: 277 ccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccg 336 | || || ||||| || ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 110796 cagcaagggtgcgtccttcctcgagctgcttgccagcgaagatgaggcgctgctggtccg 110855 Query: 337 g 337 | Sbjct: 110856 g 110856
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 129 bits (65), Expect = 6e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 217 acaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagt 276 |||||||||||||||| ||||| || | |||||||||||||||||||| |||||||||| Sbjct: 22943 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 23002 Query: 277 ccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccg 336 | || || ||||| || ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 23003 cagcaagggtgcgtccttcctcgagctgcttgccagcgaagatgaggcgctgctggtccg 23062 Query: 337 g 337 | Sbjct: 23063 g 23063
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||| Sbjct: 221 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 162 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| Sbjct: 161 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggat 106
>gb|BT016665.1| Zea mays clone Contig498 mRNA sequence Length = 1012 Score = 127 bits (64), Expect = 3e-26 Identities = 100/112 (89%) Strand = Plus / Minus Query: 233 gcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcc 292 ||||||||||| ||||||||| ||||||||||||||||||||| || || || ||||| Sbjct: 522 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 463 Query: 293 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 462 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggagggatg 411 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||||| |||||| || ||||||||||||||||||||| || Sbjct: 761 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 702 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct: 701 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgctggtctgggggg 642 Query: 342 atg 344 ||| Sbjct: 641 atg 639 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 ||||||||| || | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 297 gaggcggagaacaaggtggagggtgctctccttctggatgttgtagtcggcaagtgtgcg 238 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct: 237 cccgtcctcgagctgcttgccagcgaagatgagccgctgctggtccgg 190
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||| || Sbjct: 296 gccaccgcggaggcggagcaccaggtggagggtggactccttctgaatgttgtagtcggc 237 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| || ||||| |||||||| || || |||||||| |||||||||||||| || Sbjct: 236 gagggtgcgaccgtcctcgagctgcttgccggcgaagatgagccgctgctggtccggggg 177 Query: 341 gatg 344 |||| Sbjct: 176 gatg 173
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 233 gcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcc 292 ||||||||||| ||||||||| ||||||||||||||||||||| || || || ||||| Sbjct: 149 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 90 Query: 293 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 89 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggtgg 42 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 844 ccaccgcggaggcggagcaccaagtggagggtgctctccttctggatgttgtagtcagcc 785 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 | ||||| |||||||| |||||||| || || ||||| || ||||||||||||||||| Sbjct: 784 aaggtgcgaccatcctccagctgcttgccggcgaagatcagccgctgctggtccggtgg 726 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| |||||||||||||||||| || || || || ||||||||| Sbjct: 601 agcaccaagtggagggtgctctccttctggatgttgtaatctgcaagggtacggccatcc 542 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 541 tccagctgcttgccagcaaagatgagccgctgctggtccggtgg 498 Score = 103 bits (52), Expect = 4e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||||||||||||||| || || |||||||||||| Sbjct: 373 agcaccaagtggagggtgctctccttctggatgttgtagtctgctagggtgcggccatcc 314 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 313 tccagctgcttgccggcgaagatcagacgctgctggtctggggggatg 266
>emb|X73119.1|LTLTUBEPA L.tarentolae LtUB-EP52 (A) gene for ubiquitin-fusion protein Length = 823 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| || ||||| ||||||| ||| || || ||||||||||||||||||||||||| Sbjct: 462 gccaccgcgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtagtccga 403 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 402 gagagtgcggccctcctccagctgcttgccagcgaagatcaggcgctgctggtccggcgg 343 Query: 341 gatg 344 |||| Sbjct: 342 gatg 339
>emb|X60826.1|CRUBI3 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) Length = 730 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 218 agcaccaggtggagggtggactccttctggatgttgtagtccgccagggtgcggccgtcc 159 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || || ||||| || |||||||||||||| |||||| Sbjct: 158 tccagctgcttgccggcgaagatcagacgctgctggtccggagggatg 111
>emb|X15427.1|CRUBIRP Chlamydomonas reinhardtii UBI1-ribosomal protein fusion mRNA Length = 689 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 220 agcaccaggtggagggtggactccttctggatgttgtagtccgccagggtgcggccgtcc 161 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || || ||||| || |||||||||||||| |||||| Sbjct: 160 tccagctgcttgccggcgaagatcagacgctgctggtccggagggatg 113
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 233 gcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcc 292 ||||||||||| ||||||||| ||||||||||||||||||||| || || || ||||| Sbjct: 3005 gcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggcc 2946 Query: 293 atcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 2945 atcctccagctgcttgccagcaaagatcaggcgctgctggtccggtgg 2898 Score = 119 bits (60), Expect = 6e-24 Identities = 105/120 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| | |||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 2789 gccacccctgaggcggagcaccaagtggagggtgctctccttctggatgttgtagtcagc 2730 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| |||||||| |||||||| || || ||||| || ||||||||||||||||| Sbjct: 2729 caaggtgcgaccatcctccagctgcttgccggcgaagatcagccgctgctggtccggtgg 2670 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| |||||||||||||||||| || || || || ||||||||| Sbjct: 2545 agcaccaagtggagggtgctctccttctggatgttgtaatctgcaagggtacggccatcc 2486 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2485 tccagctgcttgccagcaaagatgagccgctgctggtccggtgg 2442 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||||| |||||| || ||||||||||||||||||||| || Sbjct: 3244 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 3185 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct: 3184 agggtgcggccatcctccagctgcttgccggcgaagatcagacgctgctggtctgggggg 3125 Query: 342 atg 344 ||| Sbjct: 3124 atg 3122 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||||||||| ||||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 2087 caccaagtggagggtgctctccttctgaatgttgtagtcggccagcgtgcgcccgtcctc 2028 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 2027 gagctgcttgccagcaaaaatgagccgctgctggtccggagggatg 1982 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||| ||||||||||| || || ||||| || ||| Sbjct: 2317 agcaccaagtggagggtgctctccttctgaatgttgtagtcggcaagcgtgcgcccgtcc 2258 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || ||||| ||||| |||||||||||||| |||||| Sbjct: 2257 tcgagctgcttgccggcaaaaatgagccgctgctggtccggagggatg 2210 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 ||||||||| || | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 1868 gaggcggagaacaaggtggagggtgctctccttctggatgttgtagtcggcaagtgtgcg 1809 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct: 1808 cccgtcctcgagctgcttgccagcgaagatgagccgctgctggtccgg 1761
>gb|AY099132.1| Cercomonas edax isolate pub4 polyubiquitin gene, partial cds Length = 495 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||||| || Sbjct: 405 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtagtcagc 346 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||| ||||| |||||||| || || || |||||||||||||| ||||| || Sbjct: 345 cagggtgcggccgtcctcgagctgcttgccggcgaaaatgaggcgctgctgatccggggg 286 Query: 341 gatg 344 |||| Sbjct: 285 gatg 282
>gb|AY099131.1| Cercomonas edax isolate pub3 polyubiquitin gene, partial cds Length = 448 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||||| || Sbjct: 358 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtagtcagc 299 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||| ||||| |||||||| || || || |||||||||||||| ||||| || Sbjct: 298 cagggtgcggccgtcctcgagctgcttgccggcgaaaatgaggcgctgctgatccggggg 239 Query: 341 gatg 344 |||| Sbjct: 238 gatg 235
>gb|AY101385.1| Cercomonas ATCC50316 polyubiquitin 7 (pub7) gene, partial cds Length = 532 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||| ||||| ||||||||||| |||||||||||||| || ||| Sbjct: 201 cggaggcggagcacgaggtgaagggtggactccttctgaatgttgtagtccgcgagcgtg 142 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || |||||||| ||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 141 cgaccatcctcgagctgtttgcccgcaaagatgaggcgctgctggtccggcgggat 86 Score = 103 bits (52), Expect = 4e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | |||||| |||||||||||||| |||||||||||||| || || Sbjct: 435 cggaggcggagcacgaggtggagcgtcgactccttctgaatgttgtagtccgcgagcgta 376 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| || || ||||| || || |||||||| ||||| ||||||||||| ||||| Sbjct: 375 cggccgtcttcgagctgtttgcccgcaaagatcaggcgttgctggtccggcgggat 320
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||| Sbjct: 140568 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 140627 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| Sbjct: 140628 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggat 140683
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||| Sbjct: 323 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 264 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| Sbjct: 263 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggat 208
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||| Sbjct: 323 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtg 264 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || || ||||| |||||||| || || |||||||| ||||||||||| || ||||| Sbjct: 263 cgcccgtcctccagctgcttgccggcgaagatgagccgctgctggtcgggcgggat 208
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 127 bits (64), Expect = 3e-26 Identities = 106/120 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| |||||||||||||||||||| || || Sbjct: 684 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtaatcagc 625 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| |||||||| || ||||||||||| | ||||||||||||||| Sbjct: 624 caaggtgcggccgtcctccagctgcttgccggcaaagatgagcctctgctggtccggtgg 565 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 432 gtggagggtggactccttctggatgttgtaatcagccagggtgcggccatcctcaagctg 373 Query: 305 cttaccagcaaagatgag 322 ||| || ||||||||||| Sbjct: 372 cttgccggcaaagatgag 355 Score = 101 bits (51), Expect = 1e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| ||||| || || | ||||||||| |||||||||||||||||||| ||||| Sbjct: 228 gccaccacgaaggcgaagtacgaggtggagggtggactccttctggatgttgtaatccgc 169 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || || |||||||||||||| |||||||| |||||||| Sbjct: 168 aagggtccggccatcctcaagttgcttaccggcaaagat 130 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| ||||| || |||||||| |||||||| || ||||| ||| Sbjct: 1133 cggaggcggagcaccaggtgaagggtggattccttctgaatgttgtaatctgccagggtg 1074 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || ||||| |||||||| ||||||||||| || | |||||| |||||||| Sbjct: 1073 cgcccgtcctccagctgcttcccagcaaagatcagcctctgctgatccggtgg 1021 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 884 agggtagactccttctgaatgttgtaatctgccagggtgcggccatcctcaagctgcttg 825 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || ||||||||||| | ||||||||||| Sbjct: 824 ccggcaaagatgagcctttgctggtccgg 796
>gb|U84967.1|ATU84967 Arabidopsis thaliana ubiquitin (UBQ11) gene, complete cds Length = 912 Score = 127 bits (64), Expect = 3e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 911 ccaccacggagacggaggaccaagtgaagagtagactccttctggatattgtagtcggcc 852 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 851 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 796 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 227 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| ||||| || || || ||||| || | |||||||||||| Sbjct: 167 aacgtgcggccatcctctagctgtttcccggcgaagataagcctctgctggtccgg 112 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || |||||| |||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 437 accaagtgaagtgtggactccctctgaatgttgtagtcagccaaagttctgccatcttca 378 Query: 300 agctgcttaccagcaaagat 319 || ||||| ||||| ||||| Sbjct: 377 agttgctttccagcgaagat 358 Score = 42.1 bits (21), Expect = 1.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 |||||| || ||||| ||||||||||| |||||||| || |||| || || |||||||| Sbjct: 666 caccaaatgaagggtagactccttctgaatgttgtaatcagccaaggtacgaccatcctc 607 Query: 299 aagctgcttaccagcaaagat 319 | ||| || ||||| ||||| Sbjct: 606 caactgttttccagcgaagat 586
>gb|BT016596.1| Zea mays clone Contig429 mRNA sequence Length = 980 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||||| ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 513 gaggcggagcaccaggtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 454 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 453 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatg 399 Score = 101 bits (51), Expect = 1e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||| | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 285 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 226 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || ||||||||||| || ||||| |||||||| ||||||||||| || |||||| Sbjct: 225 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatg 171 Score = 95.6 bits (48), Expect = 9e-17 Identities = 111/132 (84%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||||||| Sbjct: 758 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 699 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || | |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 698 tagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 639 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 638 tccggggggatg 627
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 518 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 459 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 458 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatg 404 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 ||||||||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| Sbjct: 719 ctccttctggatgttgtagtcggccagcgtgcgcccgtcctcaagctgctttccagcaaa 660 Query: 317 gatgaggcgctgctggtc 334 |||||| ||||||||||| Sbjct: 659 gatgagccgctgctggtc 642 Score = 101 bits (51), Expect = 1e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||| | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 290 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 231 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || ||||||||||| || ||||| |||||||| ||||||||||| || |||||| Sbjct: 230 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatg 176 Score = 79.8 bits (40), Expect = 5e-12 Identities = 109/132 (82%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||| | | ||||||| |||||| ||||||||| Sbjct: 991 acttactgaccaccacggagacggagcacaagggggagggtgctctccttttggatgttg 932 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || | | |||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 931 tagtctgctaaggggcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 872 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 871 tccggggggatg 860
>gb|BT017660.1| Zea mays clone EL01N0440E11.c mRNA sequence Length = 997 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 522 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 463 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 462 cccgtcctcaagctgcttcccagcaaagatgagccgctgctggtctggagggatg 408 Score = 101 bits (51), Expect = 1e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||||||| | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 294 gaggcggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcg 235 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || ||||||||||| || ||||| |||||||| ||||||||||| || |||||| Sbjct: 234 cccgtcctcaagctgtttgccagcgaagatgagccgctgctggtctggggggatg 180 Score = 60.0 bits (30), Expect = 5e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||| | | |||||| |||||| ||||||||| Sbjct: 767 acttactgaccaccacggagacggagcacaagggggagggggctctccttttggatgttg 708 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || | | |||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 707 tagtctgctaaggggcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 648 Query: 333 tc 334 || Sbjct: 647 tc 646
>dbj|AB070526.1| Physarum polycephalum ub2 mRNA for ubiquitin 2, complete cds Length = 985 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 884 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcgga 825 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| |||||||| || |||||||| Sbjct: 824 gagggtgcgtccatcctcgagctgcttgccggcaaagat 786 Score = 77.8 bits (39), Expect = 2e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 200 gccaccacgtagacggagcaccaagtgaagggtggactccttctggatgttgtaatcaga 141 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || || || |||||||| || ||||| || |||||||| Sbjct: 140 gagggtacgtccatcctctagttgcttgccggcaaagat 102 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||| ||||||||||| ||||| ||||| ||||| |||||||| || | Sbjct: 655 ccaccacgaaggcgaagcaccaagtgaagggtggactctttctgaatgttgtaatcagaa 596 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || || || || ||||| || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct: 595 agggtacgtccgtcctctagttgctttccagcgaagatgaggcgttgttggtcagggggg 536 Query: 342 at 343 || Sbjct: 535 at 534 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||| | Sbjct: 427 ccaccgcgaaggcgaagcaccaagtgaagggtggactccttctggatgttatagtcagag 368 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || || || |||||||| || ||||| ||||| ||||| Sbjct: 367 agggtacgtccatcctcgagttgctttccagcgaagat 330
>emb|X92422.1|ZMUBIS27F Z.mays mRNA for ubiquitin/ribosomal protein S27a fusion protein Length = 777 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||||| |||| ||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 309 gaggcggacgaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcg 250 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||| |||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 249 gccatcctcgagctgcttgccggcgaagatgaggcgctgctggtccggcgggatg 195
>dbj|AB045756.1| Physarum polycephalum ppub2 mRNA for polyubiquitin, complete cds Length = 985 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 884 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcgga 825 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| |||||||| || |||||||| Sbjct: 824 gagggtgcgtccatcctcgagctgcttgccggcaaagat 786 Score = 77.8 bits (39), Expect = 2e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 200 gccaccacgtagacggagcaccaagtgaagggtggactccttctggatgttgtaatcaga 141 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || || || |||||||| || ||||| || |||||||| Sbjct: 140 gagggtacgtccatcctctagttgcttgccggcaaagat 102 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||| ||||||||||| ||||| ||||| ||||| |||||||| || | Sbjct: 655 ccaccacgaaggcgaagcaccaagtgaagggtggactctttctgaatgttgtaatcagaa 596 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || || || || ||||| || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct: 595 agggtacgtccgtcctctagttgctttccagcgaagatgaggcgttgttggtcagggggg 536 Query: 342 at 343 || Sbjct: 535 at 534 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||| | Sbjct: 427 ccaccgcgaaggcgaagcaccaagtgaagggtggactccttctggatgttatagtcagag 368 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || || || |||||||| || ||||| ||||| ||||| Sbjct: 367 agggtacgtccatcctcgagttgctttccagcgaagat 330
>ref|XM_956819.1| Neurospora crassa OR74A hypothetical protein ( (AF056623) ubiquitin fusion protein [Magnaporthe grisea] ) (NCU05275.1) partial mRNA Length = 390 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 ||||| |||||||||||||| ||||||||||||||||||||||| | || ||||||||| Sbjct: 218 cggaggaccaagtggagggttgactccttctggatgttgtagtcggagagggtgcggcca 159 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| |||||||| |||||||| || |||||||||||||| || ||||| Sbjct: 158 tcctcgagctgcttgccagcaaaaatcaggcgctgctggtcgggcgggat 109
>ref|XM_324631.1| Neurospora crassa OR74A hypothetical protein ( (AF056623) ubiquitin fusion protein [Magnaporthe grisea] ) (NCU05275.1) partial mRNA Length = 390 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 ||||| |||||||||||||| ||||||||||||||||||||||| | || ||||||||| Sbjct: 218 cggaggaccaagtggagggttgactccttctggatgttgtagtcggagagggtgcggcca 159 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| |||||||| |||||||| || |||||||||||||| || ||||| Sbjct: 158 tcctcgagctgcttgccagcaaaaatcaggcgctgctggtcgggcgggat 109
>gb|AY232172.1| Drosophila yakuba clone yak-ad_RpL40 mRNA sequence Length = 384 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| | | Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtcggac 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct: 167 agagtgcggccgtcctccagctgcttgccggcgaagatcagacgctgctg 118
>gb|AY231778.1| Drosophila yakuba clone yak-em_RpL40 mRNA sequence Length = 384 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| | | Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtcggac 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct: 167 agagtgcggccgtcctccagctgcttgccggcgaagatcagacgctgctg 118
>emb|Y12082.1|SDPOLUBQ2 Suberites domuncula mRNA for polyubiquitin precursor, partial Length = 670 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| | Sbjct: 209 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtcggaa 150 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 149 agagtgcggccatcttcaagttgctttccagcaaagataagacgctgctg 100 Score = 109 bits (55), Expect = 6e-21 Identities = 103/119 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| | | Sbjct: 437 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtcggac 378 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| ||||| || |||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 377 agagtgcgaccatcttcgagctgcttgccagcgaaaatgagacgttgttggtctggtgg 319
>emb|X66875.1|AOULF A.officinalis mRNA for ubiquitin-long tail fusion Length = 640 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||||||||||||||||||||||||||||||||| || || || Sbjct: 115 cggaggcggagcacgaggtggagggtcgactccttctggatgttgtagtcggctagggtt 56 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| ||||| |||||||| || || || |||||||||||||||||||| Sbjct: 55 cggccgtcctcgagctgctttcccgcgaaaatgaggcgctgctggtccgg 6
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| | | Sbjct: 348 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 289 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 288 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctg 239
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| | | Sbjct: 289 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 230 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 229 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctg 180
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| | | Sbjct: 54634 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 54693 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 54694 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctg 54743
>emb|Z93118.1|MAZ93118 M.acuminata mRNA; clone pBAN UU116 Length = 791 Score = 123 bits (62), Expect = 4e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| |||||||||||||||||||| || || Sbjct: 168 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtaatcagc 109 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||||||||||||| |||||||| || ||||||||||| | ||||||||| Sbjct: 108 caaggtgcggccatcctcgagctgcttgccggcaaagatgagcctctgctggtc 55 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 368 agggtagactccttctgaatgttgtaatctgccagggtgcggccatcctcaagctgcttg 309 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || ||||||||||| | ||||||||||| Sbjct: 308 ccggcaaagatgagcctttgctggtccgg 280
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| | | Sbjct: 196973 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 196914 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 196913 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctg 196864
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| | | Sbjct: 21114 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 21055 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 21054 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctg 21005
>emb|AJ575140.1|SMA575140 Sordaria macrospora partial smu5995 gene for polyubiquitin homolog Length = 626 Score = 123 bits (62), Expect = 4e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||| | Sbjct: 419 ccaccacggagacggagcaccaagtgcagggtgctctccttctgaatgttgtagtcggag 360 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| ||||||||||| |||||||| |||||||||||||| |||||||| || |||||| Sbjct: 359 agagtacggccatcctcgagctgctttccagcaaagatgagacgctgctgatcaggtggg 300 Query: 342 at 343 || Sbjct: 299 at 298 Score = 95.6 bits (48), Expect = 9e-17 Identities = 78/88 (88%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||| |||| ||| || ||||||||||| | |||||| |||||||| Sbjct: 612 ctccttctggatgttgtaatccgacagggtccggccatcctccaactgcttgccagcaaa 553 Query: 317 gatgaggcgctgctggtccggtgggatg 344 ||| |||||||||||||| || |||||| Sbjct: 552 gatcaggcgctgctggtcgggcgggatg 525 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 |||||||| ||||||||||| ||||||||||| || |||||| || || ||||||||| Sbjct: 167 tggagggtagactccttctgaatgttgtagtcgctcaaagtgcgaccgtcttcaagctgc 108 Query: 306 ttaccagcaaagatgaggcgctgctg 331 || || ||||||||||| |||||||| Sbjct: 107 ttgccggcaaagatgagacgctgctg 82
>ref|XM_369420.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06044.4) partial mRNA Length = 366 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 206 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtagtcggag 147 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 ||||| ||||| ||||| | |||||| ||||||||||| || ||||| ||||| Sbjct: 146 agagtacggccgtcctccaactgcttgccagcaaagataagacgctgttggtc 94
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||| || ||||| |||||||| || |||||||||||||||||||| || Sbjct: 542 gccaccacggaggcgaaggaccaaatggagggtggattccttctggatgttgtagtctgc 483 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| || ||||||||||||||||| ||||||||||| | | |||||||||||| Sbjct: 482 aagagtacgcccatcctcaagctgcttgccagcaaagatcaacctctgctggtccgg 426 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||| || Sbjct: 314 gccaccacgtagacggagaaccaagtggagggtggactccttctgaatgttatagtcagc 255 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||| || ||||||||||| |||||||| ||||| || ||||| | |||||||||||| Sbjct: 254 cagcgtacggccatcctccagctgcttgccagcgaatatgagcctctgctggtccgg 198 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||||||||||||||| |||||||||||||||||||| || || || || ||||| || Sbjct: 71 gagcaccaagtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtc 12 Query: 296 ctcaagctg 304 |||||||| Sbjct: 11 ttcaagctg 3 Score = 56.0 bits (28), Expect = 8e-05 Identities = 42/47 (89%) Strand = Plus / Minus Query: 261 ttctggatgttgtagtccgccagagtgcggccatcctcaagctgctt 307 ||||||||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 733 ttctggatgttgtagtctgcaagagtacgcccatcntcaagctgctt 687
>gb|AF517849.1| Griffithsia japonica isolate Gj532 polyubiquitin mRNA, partial cds Length = 681 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||| ||| Sbjct: 576 cggaggcggagcaccagatggagcgtcgactccttctggatgttgtagtcggacagggtg 517 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| || || |||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 516 cggccgtcttcgagctgcttgccagcgaaaatgagacgctgctggtccggagggatg 460 Score = 109 bits (55), Expect = 6e-21 Identities = 103/119 (86%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| || |||||||||| || ||||||||||||||||||||||| ||||| | ||| Sbjct: 351 ccacgcagacggagcaccagatgaagggtcgactccttctggatgttatagtcggacagg 292 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| ||||| ||||| || || ||||||||||| |||||||||||||| ||||| Sbjct: 291 gtgcggccgtcctcgagctgtttgccggcaaagatgagacgctgctggtccggagggat 233
>gb|AF517848.1| Griffithsia japonica isolate Gj526 polyubiquitin mRNA, partial cds Length = 741 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||||| |||||||||||||||||||||||||| | ||| ||| Sbjct: 728 cggaggcggagcaccagatggagcgtcgactccttctggatgttgtagtcggacagggtg 669 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| || || |||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 668 cggccgtcttcgagctgcttgccagcgaaaatgagacgctgctggtccggagggatg 612 Score = 111 bits (56), Expect = 1e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| || |||||||||| ||||| |||||||||||||||||||||||||| | ||| Sbjct: 503 ccacgcagacggagcaccagatggagcgtcgactccttctggatgttgtagtcggacagg 444 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| || || |||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 443 gtgcggccgtcttcgagctgcttgccagcgaaaatgagacgctgctggtccggagggatg 384 Score = 109 bits (55), Expect = 6e-21 Identities = 103/119 (86%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| || |||||||||| || ||||||||||||||||||||||| ||||| | ||| Sbjct: 275 ccacgcagacggagcaccagatgaagggtcgactccttctggatgttatagtcggacagg 216 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| ||||| ||||| || || ||||||||||| |||||||||||||| ||||| Sbjct: 215 gtgcggccgtcctcgagctgtttgccggcaaagatgagacgctgctggtccggagggat 157
>emb|X74214.1|VCUBI1 V.carteri gene for polyubiquitin Length = 2619 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || |||||||||| ||| | ||| ||||||||| |||||||||||||| Sbjct: 2008 gccaccacgcagacggagcaccaggtgcaaggtgctctccttctgaatgttgtagtccgc 1949 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||||| |||||||| |||||||| || || |||||||||||||| Sbjct: 1948 cagagtgcggccatcctccagctgcttgccagcaaaaatcagacgctgctggtccgg 1892 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || |||||||||| ||| | ||| ||||||||| |||||||||||||| Sbjct: 1656 gccaccacgcagacggagcaccaggtgcaaggtgctctccttctgaatgttgtagtccgc 1597 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||||| |||||||| |||||||| || || |||||||||||||| Sbjct: 1596 cagagtgcggccatcctccagctgcttgccagcaaaaatcagacgctgctggtccgg 1540 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || |||||||||| ||| | ||| ||||||||| |||||||||||||| Sbjct: 1304 gccaccacgcagacggagcaccaggtgcaaggtgctctccttctgaatgttgtagtccgc 1245 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||||||||||||| |||||||| |||||||| || || |||||||||||||| Sbjct: 1244 cagagtgcggccatcctccagctgcttgccagcaaaaatcagacgctgctggtccgg 1188 Score = 113 bits (57), Expect = 4e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2343 ctccttctgaatgttgtagtccgccagagtgcggccatcctccagctgcttgccagcaaa 2284 Query: 317 gatgaggcgctgctggtccgg 337 || || |||||||||||||| Sbjct: 2283 aatcagacgctgctggtccgg 2263 Score = 113 bits (57), Expect = 4e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 916 ctccttctgaatgttgtagtccgccagagtgcggccatcctccagctgcttgccagcaaa 857 Query: 317 gatgaggcgctgctggtccgg 337 || || |||||||||||||| Sbjct: 856 aatcagacgctgctggtccgg 836
>emb|AJ000659.1|PB659UB Phreatamoeba balamuthi UBI5 sequence, putative polyubiquitin gene Length = 187 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| || Sbjct: 177 gtcgactccttctggatgttgtagtcggccagcgtgcggccgtcctcgagctgcttgccc 118 Query: 312 gcaaagatgaggcgctgctggtccggtgggatg 344 || ||||||||||||||||||||||| |||||| Sbjct: 117 gcgaagatgaggcgctgctggtccggggggatg 85
>gb|AF436850.1|AF436850 Cucumis melo polyubiquitin mRNA, partial cds Length = 433 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 118 ccaccacgaagacggaggaccaagtggagggtagactccttctggatgttgtagtcggcc 59 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 | ||||||||||||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct: 58 aaagtgcggccatcctcgagttgctttccagcgaagataagacgctgttggtc 6 Score = 81.8 bits (41), Expect = 1e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || | ||| | ||||||||| |||||||||||||||||||| || || Sbjct: 346 ccaccacggagacgcaacacaaggtggagggtggactccttctggatgttgtaatcggca 287 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgag 322 || || ||||| ||||| | |||||||||||||||||||| Sbjct: 286 agggtacggccgtcctctaattgcttaccagcaaagatgag 246
>gb|AF216530.1|AF216530 Oryza sativa ubiquitin RiP-20 mRNA, partial cds Length = 456 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 213 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 154 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||| |||||||| |||||||| ||| | ||||| || ||||||||||| Sbjct: 153 aggttgcgtccatcctccagctgcttgccaccgaagatcagacgctgctggtc 101
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 121 bits (61), Expect = 2e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 2789 gaggcgcagcaccaagtggagggtgctctccttctggatgttgtagtcggcaagcgtgcg 2730 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 2729 cccgtcctcaagctgctttccagcaaagatgagccgctgctggtc 2685 Score = 119 bits (60), Expect = 6e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||| |||||||| |||||||||||||| |||||||| || || || Sbjct: 3446 ctccttctggatgttgtaatccgccagggtgcggccatcctccagctgcttgccggcgaa 3387 Query: 317 gatgaggcgctgctggtccggtgggatg 344 |||||||||||||||||| ||||||||| Sbjct: 3386 gatgaggcgctgctggtcgggtgggatg 3359 Score = 117 bits (59), Expect = 2e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||||| ||||||||| |||||||||||||||||| ||||| || ||||||||| Sbjct: 3241 cggagcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggcca 3182 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| |||||||| ||||| ||||| | ||||||||||||||||||||| Sbjct: 3181 tcctccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatg 3131 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 3674 ctccttctggatgttgtagtccgcgagagtgcggccatcctccagctgcttgcccgcaaa 3615 Query: 317 gatgaggcgctgctggtc 334 ||| || ||||||||||| Sbjct: 3614 gatcagacgctgctggtc 3597 Score = 103 bits (52), Expect = 4e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | ||||||||||| |||||||| | ||||||||| |||||| ||||||||| Sbjct: 3946 acttactgaccaccacggagacggagcacaaggtggagggtgctctccttttggatgttg 3887 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 ||||| || || |||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 3886 tagtctgctagggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctgg 3827 Query: 333 tccggtgggatg 344 ||||| |||||| Sbjct: 3826 tccggggggatg 3815 Score = 101 bits (51), Expect = 1e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||| | ||||||||| ||||||||||||||||||||| || || ||||| || Sbjct: 3013 cggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcgcccg 2954 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||||| || |||||||||||||| ||||||||||| || |||||| Sbjct: 2953 tcctcaagctgtttgccagcaaagatgagccgctgctggtctggggggatg 2903 Score = 101 bits (51), Expect = 1e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||| | ||||||||| ||||||||||||||||||||| || || ||||| || Sbjct: 2557 cggagcacaaggtggagggtgctctccttctggatgttgtagtcagcaagcgtgcgcccg 2498 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||||| || |||||||||||||| ||||||||||| || |||||| Sbjct: 2497 tcctcaagctgtttgccagcaaagatgagccgctgctggtctggggggatg 2447
>gb|U82086.1|FAU82086 Fragaria ananassa polyubiquitin (FUBI1) mRNA, complete cds Length = 1374 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || |||||||| ||||||||||||||||||||||| ||||| || || Sbjct: 252 ccaccacgcagacgaagcaccaaatggagggtcgactccttctggatattgtaatcagca 193 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || || |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 192 agggttcggccatcctcaagctgcttgccagcaaagatcagacgctgctggtc 140 Score = 105 bits (53), Expect = 9e-20 Identities = 83/93 (89%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 ||||||||||||||||| |||||||| || || ||||||||||||||||||||||| || Sbjct: 450 gtcgactccttctggatattgtagtctgctagggtgcggccatcctcaagctgcttcccg 391 Query: 312 gcaaagatgaggcgctgctggtccggtgggatg 344 ||||||||||| | ||||||||| || |||||| Sbjct: 390 gcaaagatgagcctctgctggtcaggggggatg 358 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 ||||||||||||||||||||| || || || || ||||||||||||||||| |||||||| Sbjct: 901 ctccttctggatgttgtagtcagcaagcgtacgcccatcctcaagctgctttccagcaaa 842 Query: 317 gatgaggcgctgctggtc 334 ||| || ||||||||||| Sbjct: 841 gataagtcgctgctggtc 824 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 ||||||||||||||||||||| || || || || |||||||| | |||||| ||||| || Sbjct: 1129 ctccttctggatgttgtagtcagcaagggtacgtccatcctccaactgcttgccagcgaa 1070 Query: 317 gatgaggcgctgctg 331 ||| ||||||||||| Sbjct: 1069 gatcaggcgctgctg 1055 Score = 50.1 bits (25), Expect = 0.005 Identities = 82/101 (81%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||||| || || ||||| |||||||| || || || || |||| || |||||| Sbjct: 696 cggagcaccagatgaagagtcgattccttctgaatattataatcagccaacgttcggcca 637 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 ||||| |||||||| || ||||| || || ||||||||||| Sbjct: 636 tcctcgagctgcttgcctgcaaaaataagtcgctgctggtc 596
>dbj|AB033601.1| Cucumis melo mRNA for polyubiquitin, partial cds Length = 381 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 116 ccaccacgaagacggaggaccaagtggagggtagactccttctggatgttgtagtcggcc 57 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 | ||||||||||||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct: 56 aaagtgcggccatcctcgagttgctttccagcgaagataagacgctgttggtc 4 Score = 75.8 bits (38), Expect = 8e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| || || || || ||||| ||||| | || Sbjct: 321 gtggagggtggactccttctggatgttgtaatcggcaagggtacggccgtcctctaattg 262 Query: 305 cttaccagcaaagatgag 322 |||||||||||||||||| Sbjct: 261 cttaccagcaaagatgag 244
>ref|NM_178970.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.4 mRNA, complete cds Length = 1624 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1416 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1357 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1356 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1301 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1172 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 1113 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1112 caattgttttccggcaaagatcaacctctgctggtccggagggat 1068 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 277 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 218 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 217 aacgtacggccatcctctagctgctt 192 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 478 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 419 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 418 ccggcgaagatcagcctctgctggtccgg 390 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 943 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 884 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 883 agttgctttccggcgaagatcaatctctgctggtccggtgggat 840 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 715 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 656 Query: 300 ag 301 || Sbjct: 655 ag 654
>ref|NM_202787.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.5 mRNA, complete cds Length = 1203 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 995 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 936 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 935 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 880 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 751 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 692 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 691 caattgttttccggcaaagatcaacctctgctggtccggagggat 647 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 253 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 252 aacgtacggccatcctctagctgctt 227 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 522 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 463 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||| || || ||||| | | |||||||||||| Sbjct: 462 agttgctttccggcgaagatcaatctctgctggtccgg 425
>ref|NM_178969.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.3 mRNA, complete cds Length = 1431 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1223 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1164 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1163 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1108 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 979 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 920 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 919 caattgttttccggcaaagatcaacctctgctggtccggagggat 875 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 253 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 252 aacgtacggccatcctctagctgctt 227 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 750 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 691 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 690 agttgctttccggcgaagatcaatctctgctggtccggtgggat 647 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 522 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 463 Query: 300 ag 301 || Sbjct: 462 ag 461
>ref|NM_116771.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.1 mRNA, complete cds Length = 1431 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1223 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1164 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1163 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1108 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 979 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 920 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 919 caattgttttccggcaaagatcaacctctgctggtccggagggat 875 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 253 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 252 aacgtacggccatcctctagctgctt 227 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 513 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 454 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 453 ccggcgaagatcagcctctgctggtccgg 425 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 750 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 691 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 690 agttgctttccggcgaagatcaatctctgctggtccggtgggat 647
>ref|NM_178968.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.2 mRNA, complete cds Length = 1834 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1451 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1392 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1391 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1336 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1207 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 1148 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1147 caattgttttccggcaaagatcaacctctgctggtccggagggat 1103 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 253 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 252 aacgtacggccatcctctagctgctt 227 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 513 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 454 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 453 ccggcgaagatcagcctctgctggtccgg 425 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 978 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 919 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 918 agttgctttccggcgaagatcaatctctgctggtccggtgggat 875 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 750 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 691 Query: 300 ag 301 || Sbjct: 690 ag 689
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 680 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 621 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 620 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtgg 565 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 1139 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 1080 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 1079 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 1020 Query: 342 atg 344 ||| Sbjct: 1019 atg 1017 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 884 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 825 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| ||||| Sbjct: 824 ccagcgaagatgaggcgctgctggtctggtgg 793 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 449 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 390 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 389 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggat 334 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 224 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 165 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 164 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 105
>emb|AJ698912.1| Fusarium fujikuroi partial mRNA for polyubiquitin, clone gsr13 Length = 509 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||||||||||||||| || || |||||||||||||||||||| | Sbjct: 118 ccaccacgaagacggagcaccaagtggagagtagattccttctggatgttgtagtcggaa 59 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 ||||| |||||||||||||| ||||| |||||||||||||| ||||| || ||||| Sbjct: 58 agagttcggccatcctcaagttgcttgccagcaaagatgagtcgctgttgatccgg 3 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Minus Query: 214 cttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgt 273 ||||| ||||||| || || ||||| || | |||||| || |||||||||||||| |||| Sbjct: 354 cttactggccaccgcgaagtcggagaacgaggtggagagttgactccttctggatattgt 295 Query: 274 agtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 |||| || ||||| ||||| || | |||||||||||| ||||| || |||||||| Sbjct: 294 agtcgctcaaggtgcgaccatcttccaactgcttaccagcgaagataagacgctgctg 237
>gb|AY056295.1| Arabidopsis thaliana At4g05320 mRNA sequence Length = 1637 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1433 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1374 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1373 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1318 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1188 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 1129 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1128 caattgttttccggcaaagatcaacctctgctggtccggagggat 1084 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 234 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 233 aacgtacggccatcctctagctgctt 208 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 494 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 435 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 434 ccggcgaagatcagcctctgctggtccgg 406 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 959 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 900 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 899 agttgctttccggcgaagatcaatctctgctggtccggtgggat 856 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 731 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 672 Query: 300 ag 301 || Sbjct: 671 ag 670
>emb|Z24723.1|PCUBIQGNA P.chrysosporium ubiquitin gene, complete CDS Length = 2054 Score = 119 bits (60), Expect = 6e-24 Identities = 90/100 (90%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| || | || |||||||||||||||||||| Sbjct: 576 gtggagggtggactccttctggatgttgtaatcggagagggtgcggccatcctcaagctg 517 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 516 cttgccggcaaagatgagacgctgctggtctggtgggatg 477 Score = 107 bits (54), Expect = 2e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||||||||| ||||||| |||||||| || ||||| ||||||||| Sbjct: 1358 agggtagactccttctggatgttatagtccgaaagagtgcgaccgtcctccagctgctta 1299 Query: 309 ccagcaaagatgaggcgctgctggtc 334 ||||| |||||||||||||||||||| Sbjct: 1298 ccagcgaagatgaggcgctgctggtc 1273 Score = 87.7 bits (44), Expect = 2e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || |||||||||||||||||||| || | || || ||||| ||||| |||||| Sbjct: 855 tggagagtagactccttctggatgttgtaatcggacaacgtacggccgtcctcgagctgc 796 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 || |||||||||||||| |||||||||||||| Sbjct: 795 ttgccagcaaagatgagacgctgctggtccgg 764 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||| |||||||| ||||| |||| || ||||||||||| || ||||| Sbjct: 1134 gtggagggtagactctttctggatattgtaatccgaaagcgtgcggccatcttcgagctg 1075 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| || || ||||| ||||||||||| ||||| |||||| Sbjct: 1074 cttgccggcgaagatcaggcgctgctgatccggagggatg 1035 Score = 52.0 bits (26), Expect = 0.001 Identities = 104/130 (80%) Strand = Plus / Minus Query: 215 ttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgta 274 |||||| ||||||||||| || ||||| | ||| || || |||||||||||||||||| Sbjct: 1672 ttacagaccaccacggagacgaagcacgaggtgaagcgtgctctccttctggatgttgta 1613 Query: 275 gtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 ||| | || || || || ||||| || ||||| || || ||||| || ||||||||||| Sbjct: 1612 gtcggagagggtacgcccgtcctcgagttgcttgccggcgaagatcagacgctgctggtc 1553 Query: 335 cggtgggatg 344 || |||||| Sbjct: 1552 gggcgggatg 1543
>emb|X73118.1|LTLTUBEP L.tarentolae lTuB-ep52 (b) gene for ubiquitin-fusion protein Length = 552 Score = 119 bits (60), Expect = 6e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| || ||||| ||||||| ||| || || ||||||||||||||||||||||||| Sbjct: 356 gccaccgcgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtagtccga 297 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||| ||||| |||||||| |||| ||||| |||||||||||||||||||| Sbjct: 296 gagcgtgcggccctcctccagctgcttgtcagcgaagatcaggcgctgctggtccggtgg 237 Query: 341 gatg 344 |||| Sbjct: 236 gatg 233
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 58377 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 58318 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 58317 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 58262 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 58133 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 58074 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 58073 caattgttttccggcaaagatcaacctctgctggtccggagggat 58029 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 57238 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 57179 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 57178 aacgtacggccatcctctagctgctt 57153 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 57439 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 57380 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 57379 ccggcgaagatcagcctctgctggtccgg 57351 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 57904 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 57845 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 57844 agttgctttccggcgaagatcaatctctgctggtccggtgggat 57801 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 57676 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 57617 Query: 300 ag 301 || Sbjct: 57616 ag 57615
>emb|AJ000660.1|PB660UB Phreatamoeba balamuthi UBI6 sequence, putative polyubiquitin gene Length = 187 Score = 119 bits (60), Expect = 6e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 ||||||||||||||||||||| |||||||||||||| ||||| |||||||| || || || Sbjct: 172 ctccttctggatgttgtagtcggccagagtgcggccgtcctcgagctgctttccggcgaa 113 Query: 317 gatgaggcgctgctggtccggtgggatg 344 ||||||||||||||||||||| |||||| Sbjct: 112 gatgaggcgctgctggtccggggggatg 85
>emb|AJ000656.1|PB656UB Phreatamoeba balamuthi UBI2 sequence, putative polyubiquitin gene Length = 187 Score = 119 bits (60), Expect = 6e-24 Identities = 90/100 (90%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 |||||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 184 gtggagcgtcgactccttctggatgttgtagtcggccagagtgcggccgtcctcgagctg 125 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| || || ||||| || |||||||||||||| |||||| Sbjct: 124 cttgcccgcgaagatcagacgctgctggtccggggggatg 85
>gb|AY139999.1| Arabidopsis thaliana polyubiquitin UBQ10 (At4g05320) mRNA, complete cds Length = 1815 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1433 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1374 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1373 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1318 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1188 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 1129 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1128 caattgttttccggcaaagatcaacctctgctggtccggagggat 1084 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 234 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 233 aacgtacggccatcctctagctgctt 208 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 494 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 435 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 434 ccggcgaagatcagcctctgctggtccgg 406 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 959 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 900 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 899 agttgctttccggcgaagatcaatctctgctggtccggtgggat 856 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 731 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 672 Query: 300 ag 301 || Sbjct: 671 ag 670
>emb|AJ844617.1| Plantago major mRNA for polyubiquitin (ubq3 gene) Length = 1319 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || Sbjct: 443 ccaccacggagacggaggaccaaatggagggtggactccttctggatgttgtagtcagcg 384 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || || || ||||||||||||||||| ||||||||||| | | |||||||||||| Sbjct: 383 agggtacgaccatcctcaagctgctttccagcaaagatcaacctctgctggtccgg 328 Score = 83.8 bits (42), Expect = 3e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| ||||| ||||| || ||||| ||||| |||||||| || || Sbjct: 215 ccaccacggagacggaggaccaaatggagagtggactctttctgaatgttgtaatcggca 156 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| ||||||||||||||||| || |||||||| Sbjct: 155 agcgtgcgaccatcctcaagctgctttccggcaaagat 118 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 1127 ccaccacggagacggaggacaaggtggagggttgactccttctggatattgtagtctgca 1068 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||||| | |||||||| | ||| || ||||| || ||||| | ||||||||| ||||| Sbjct: 1067 agagtccttccatcctccaactgttttccagcgaaaatgagcctctgctggtctggtgg 1009 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 261 ttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatg 320 |||||||| |||||||| |||||||| || |||||||| | ||||| ||||||||||| Sbjct: 860 ttctggatattgtagtcagccagagtacgaccatcctccaattgctttccagcaaagata 801 Query: 321 aggcgctgctggtccggtgggat 343 || | ||||||||| |||||||| Sbjct: 800 agtctctgctggtctggtgggat 778 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 258 tccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaag 317 |||||||| |||||||| || || || || || ||||||||||| || |||||||||||| Sbjct: 635 tccttctgaatgttgtaatcagcaagggtacgcccatcctcaagttgtttaccagcaaag 576 Query: 318 at 319 || Sbjct: 575 at 574
>gb|AY057500.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1319 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1205 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1146 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1145 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1090 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 960 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 901 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 900 caattgttttccggcaaagatcaacctctgctggtccggagggat 856 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 234 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 233 aacgtacggccatcctctagctgctt 208 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 731 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 672 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 671 agttgctttccggcgaagatcaatctctgctggtccggtgggat 628 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||| || ||||| ||||||||||| ||||||||||| |||| ||| | |||||| || Sbjct: 503 accaaatgaagggtggactccttctgaatgttgtagtcagccaaagttctgccatcttcc 444 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| || || ||||| | | |||||||||||| Sbjct: 443 agctgctttccggcgaagatcaatctctgctggtccgg 406
>gb|AY052698.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1356 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1205 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1146 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1145 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1090 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 960 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 901 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 900 caattgttttccggcaaagatcaacctctgctggtccggagggat 856 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 234 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 233 aacgtacggccatcctctagctgctt 208 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 494 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 435 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 434 ccggcgaagatcagcctctgctggtccgg 406 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 731 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 672 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||| || || ||||| | | |||||||||||| Sbjct: 671 agttgctttccggcgaagatcaatctctgctggtccgg 634
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 31998350 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 31998291 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 31998290 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtgg 31998235 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 31998809 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 31998750 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 31998749 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 31998690 Query: 342 atg 344 ||| Sbjct: 31998689 atg 31998687 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 31998554 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 31998495 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| ||||| Sbjct: 31998494 ccagcgaagatgaggcgctgctggtctggtgg 31998463 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 31998119 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 31998060 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 31998059 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggat 31998004 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 31997894 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 31997835 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 31997834 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 31997775 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccatggccaagcacttacag 220 |||||||||||||||||||| Sbjct: 964158 ccatggccaagcacttacag 964139
>emb|BX818394.1|CNS0AEC9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 625 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 127 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 186 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 187 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 242 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 372 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 431 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 432 caattgttttccggcaaagatcaacctctgctggtccggagggat 476
>emb|BX827035.1|CNS0A37F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1555 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1429 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1370 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1369 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1314 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 283 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 224 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 223 aacgtacggccatcctctagctgctt 198 Score = 60.0 bits (30), Expect = 5e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 242 caagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaag 301 |||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||||| Sbjct: 948 caagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttcaag 889 Query: 302 ctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| || || ||||| | | |||||||||||||||||| Sbjct: 888 ttgctttccggcgaagatcaatctctgctggtccggtgggat 847 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||| |||||||| || ||||| | ||||||||| | |||||| || || || Sbjct: 476 ctccttctggatattgtagtcagcaagagttctgccatcctccaactgctttccggcgaa 417 Query: 317 gatgaggcgctgctggtccgg 337 ||| || | |||||||||||| Sbjct: 416 gatcagcctctgctggtccgg 396 Score = 46.1 bits (23), Expect = 0.074 Identities = 88/107 (82%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgac-tc-cttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||| ||||||||| || ||||||||||||||| ||||||| ||| || ||||| Sbjct: 1184 caccaagtgaagggtcgacctcgcttctggatgttgtaatccgccaaagtacgagcatcc 1125 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1124 tccaattgttttccggcaaagatcaacctctgctggtccggagggat 1078 Score = 46.1 bits (23), Expect = 0.074 Identities = 41/47 (87%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaag 301 ||||||||||| ||||||||||| |||| ||| | |||||| ||||| Sbjct: 707 gactccttctgaatgttgtagtcggccaaagttctgccatcttcaag 661
>emb|BX828380.1|CNS0A30T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1431 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1372 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1371 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1316 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 279 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 220 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 219 aacgtacggccatcctctagctgctt 194 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgcca 282 ||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1187 caccaagtgaagggtcgactccttctggatgttgtaatccgcca 1144 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 726 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 667 Query: 300 ag 301 || Sbjct: 666 ag 665 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||| ||||||||||| |||| ||| | ||||| ||||| ||||| || || Sbjct: 939 gactccttctgaatgttgtagtcagccaaagttcttccatcttcaagttgctttccggcg 880 Query: 315 aagatgaggcgctgctggtccggtgggat 343 ||||| | | |||||||||||||||||| Sbjct: 879 aagatcaatctctgctggtccggtgggat 851
>emb|BX828308.1|CNS0A2WH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1214 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1151 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1092 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1091 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1036 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 906 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 847 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 846 caattgttttccggcaaagatcaacctctgctggtccggagggat 802 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 677 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 618 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 617 agttgctttccggcgaagatcaatctctgctggtccggtgggat 574 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| || || Sbjct: 203 gactccttctggatattgtagtcagcaagagttctgccatcctccaactgctttccggcg 144 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| || | |||||||||||| Sbjct: 143 aagatcagcctctgctggtccgg 121 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 449 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 390 Query: 300 ag 301 || Sbjct: 389 ag 388
>gb|AY099138.1| Cercomonas edax isolate pub10 polyubiquitin gene, partial cds Length = 532 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 414 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 355 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 354 ccggcgaagatgaggcgctgctgatccggggggatg 319 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 180 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 121 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 120 ccggcgaagatgaggcgctgctgatccggggggatg 85
>gb|AY099136.1| Cercomonas edax isolate pub8 polyubiquitin gene, partial cds Length = 412 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 294 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 235 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 234 ccggcgaagatgaggcgctgctgatccggggggatg 199
>gb|AY099135.1| Cercomonas edax isolate pub7 polyubiquitin gene, partial cds Length = 532 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 180 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 121 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 120 ccggcgaagatgaggcgctgctgatccggggggatg 85 Score = 103 bits (52), Expect = 4e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 414 agggttgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 355 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || |||||||||||||| || ||||| |||||| Sbjct: 354 ccggcgaagatgaggcgctgttgatccggggggatg 319
>gb|AY099130.1| Cercomonas edax isolate pub2 polyubiquitin gene, partial cds Length = 408 Score = 119 bits (60), Expect = 6e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 290 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 231 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 230 ccggcgaagatgaggcgctgctgatccggggggatg 195
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 3196 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 3137 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 3136 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtgg 3081 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 3655 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 3596 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 3595 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 3536 Query: 342 atg 344 ||| Sbjct: 3535 atg 3533 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 2965 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 2906 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 2905 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggat 2850 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 3400 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 3341 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||| ||||||||||||||| ||||| Sbjct: 3340 ccagcgaagacgaggcgctgctggtctggtgg 3309 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 2740 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 2681 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 2680 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 2621
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 1889 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 1830 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 1829 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtgg 1774 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 2348 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 2289 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 2288 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 2229 Query: 342 atg 344 ||| Sbjct: 2228 atg 2226 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 2093 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 2034 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| ||||| Sbjct: 2033 ccagcgaagatgaggcgctgctggtctggtgg 2002 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 1434 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 1375 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1374 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 1315 Score = 95.6 bits (48), Expect = 9e-17 Identities = 90/104 (86%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 1658 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 1599 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 ||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 1598 cggccatcctcgagctgcttcccagcaaagatgagacgctgctg 1555
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV, complete sequence Length = 145453 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 56917 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 56976 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 56977 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 57032 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 57162 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 57221 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 57222 caattgttttccggcaaagatcaacctctgctggtccggagggat 57266 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 58057 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 58116 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 58117 aacgtacggccatcctctagctgctt 58142 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 57856 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 57915 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 57916 ccggcgaagatcagcctctgctggtccgg 57944 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 57391 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 57450 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 57451 agttgctttccggcgaagatcaatctctgctggtccggtgggat 57494 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 57619 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 57678 Query: 300 ag 301 || Sbjct: 57679 ag 57680
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 747 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 688 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 687 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtgg 632 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 1206 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 1147 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 1146 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 1087 Query: 342 atg 344 ||| Sbjct: 1086 atg 1084 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 951 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 892 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| ||||| Sbjct: 891 ccagcgaagatgaggcgctgctggtctggtgg 860 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 516 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 457 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 456 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggat 401 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 291 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 232 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 231 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 172
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 19057 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 18998 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 18997 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctgctggtctggtgg 18942 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 19516 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 19457 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 19456 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 19397 Query: 342 atg 344 ||| Sbjct: 19396 atg 19394 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 19261 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 19202 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| ||||| Sbjct: 19201 ccagcgaagatgaggcgctgctggtctggtgg 19170 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 18826 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 18767 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 18766 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggat 18711 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 18601 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 18542 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 18541 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 18482
>gb|U84969.1|ATU84969 Arabidopsis thaliana ubiquitin (UBQ11) gene, complete cds Length = 1140 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||| |||||||| || || |||||||||||||||| |||||| ||| Sbjct: 1139 ccaccacgaagacggaggaccaagtgaagagtagactccttctggatgtcgtagtcggcc 1080 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1079 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1024 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 227 ccaccacggagcctgagaaccaagtggagggtggattccttctggatattgtaatccgcc 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | |||||||||||||| | |||||| || || ||||| || | |||||| ||||| Sbjct: 167 aacgtgcggccatcctccaactgctttccggcgaagataagcctctgctgatccgg 112 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 665 accaagtgaagtgttgactccttctgaatgttgtagtcagccaaagttctgccatcttca 606 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || || ||||| || ||||| | | |||||| ||||||||||| Sbjct: 605 agttgtttaccggcgaagatcaatctctgctgatccggtgggat 562 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || ||||| | ||||||||| | |||||| || || Sbjct: 422 gactccttctggatgttgtagtcagcaagagttctgccatcctccaactgctttccggcg 363 Query: 315 aagatgaggcgctgctggtccgg 337 ||||| | | |||||||||||| Sbjct: 362 aagatcaaccactgctggtccgg 340 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| || || ||||||||||| |||||||| ||||||| ||| || |||||||| Sbjct: 894 caccaagtgaagagtagactccttctgaatgttgtaatccgccaaagtacgaccatcctc 835 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | ||| || || || ||||| | | |||||||||||| ||||| Sbjct: 834 caactgttttccggcgaagatcaacctctgctggtccggagggat 790
>gb|L05361.1|ATHUBQ10R Arabidopsis thaliana polyubiquitin (ubq10) mRNA, complete cds Length = 1577 Score = 119 bits (60), Expect = 6e-24 Identities = 102/116 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 1409 ccaccacgaagacgcaggaccaagtgaagagtagactccttctggatgttgtagtcggcc 1350 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1349 aaagtacgtccatcctcaagctgctttccagcgaagatgagacgctgctggtccgg 1294 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1164 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 1105 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 1104 caattgttttccggcaaagatcaacctctgctggtccggagggat 1060 Score = 75.8 bits (38), Expect = 8e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| | ||| |||||||||||||| || ||||||||||| ||||| || ||| Sbjct: 269 ccaccacggagcctgaggaccaagtggagggtggattccttctggatattgtaatcagcc 210 Query: 282 agagtgcggccatcctcaagctgctt 307 | || ||||||||||| |||||||| Sbjct: 209 aacgtacggccatcctctagctgctt 184 Score = 65.9 bits (33), Expect = 8e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||| |||||||| || ||||| | ||||||||| | |||||| Sbjct: 470 agggtggactccttctggatattgtagtcagcaagagttctgccatcctccaactgcttt 411 Query: 309 ccagcaaagatgaggcgctgctggtccgg 337 || || ||||| || | |||||||||||| Sbjct: 410 ccggcgaagatcagcctctgctggtccgg 382 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||| ||||||||||| |||| ||| | ||||| ||| Sbjct: 935 accaagtgaagtgtggactccttctgaatgttgtagtcagccaaagttcttccatcttca 876 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||| || || ||||| | | |||||||||||||||||| Sbjct: 875 agttgctttccggcgaagatcaatctctgctggtccggtgggat 832 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || ||||||||||| ||||||||||| |||| ||| | |||||| ||| Sbjct: 707 accaagtggagtgtggactccttctgaatgttgtagtcggccaaagttctgccatcttca 648 Query: 300 ag 301 || Sbjct: 647 ag 646
>ref|NM_192272.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 459 Score = 117 bits (59), Expect = 2e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 221 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtg 162 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggga 342 ||||| ||||| |||||||| || || |||||||| |||||||||| ||| |||| Sbjct: 161 cggccgtcctccagctgcttgccggcgaagatgagccgctgctggtgcggcggga 107
>ref|XM_323905.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| | Sbjct: 227 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 167 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 108 Query: 342 atg 344 ||| Sbjct: 107 atg 105
>ref|XM_950851.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| | Sbjct: 227 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 168 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 167 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 108 Query: 342 atg 344 ||| Sbjct: 107 atg 105
>emb|CR663473.2|CNS0FAWN Tetraodon nigroviridis full-length cDNA Length = 455 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||||||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagagtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|Y17003.1|SDO17003 Suberites domuncula mRNA for polyubiquitin Length = 1145 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| | | Sbjct: 1015 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtcggac 956 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||||||||| || |||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 955 agagtgcggccatcttcgagctgcttgccagcgaaaatgagacgttgttggtctggtgg 897 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||| | | Sbjct: 787 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtcggac 728 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 |||||||||||||| || || ||||| || |||||||| || || || ||||| |||||| Sbjct: 727 agagtgcggccatcttcgagttgctttccggcaaagataagacgttgttggtctggtggg 668 Query: 342 at 343 || Sbjct: 667 at 666 Score = 99.6 bits (50), Expect = 6e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||| | | Sbjct: 559 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtcggac 500 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 |||||||||||||| || || ||||| || |||||||| || |||||||| Sbjct: 499 agagtgcggccatcttcgagttgctttccggcaaagataagacgctgctg 450 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggtggactctttctggatgttgtagtcggaa 272 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||||||||| || ||||| || ||||| || ||||| || || ||||| ||||| Sbjct: 271 agagtgcggccatcttcgagctgtttgccagcgaaaatgagacgttgttggtctggtgg 213
>emb|Y12081.1|SDPOLUBQ1 Suberites domuncula mRNA for polyubiquitin precursor Length = 1392 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| | | Sbjct: 1243 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtcggac 1184 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||||||||| || |||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 1183 agagtgcggccatcttcgagctgcttgccagcgaaaatgagacgttgttggtctggtgg 1125 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||| | | Sbjct: 1015 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtcggac 956 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 |||||||||||||| || || ||||| || |||||||| || || || ||||| |||||| Sbjct: 955 agagtgcggccatcttcgagttgctttccggcaaagataagacgttgttggtctggtggg 896 Query: 342 at 343 || Sbjct: 895 at 894 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||| | | Sbjct: 787 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtcggac 728 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 |||||||||||||| || || ||||| || |||||||| || || || ||||| |||||| Sbjct: 727 agagtgcggccatcttcgagttgctttccggcaaagataagacgttgttggtctggtggg 668 Query: 342 at 343 || Sbjct: 667 at 666 Score = 99.6 bits (50), Expect = 6e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||| | | Sbjct: 559 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtcggac 500 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 |||||||||||||| || || ||||| || |||||||| || |||||||| Sbjct: 499 agagtgcggccatcttcgagttgctttccggcaaagataagacgctgctg 450 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggtggactctttctggatgttgtagtcggaa 272 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||||||||| || ||||| || ||||| || ||||| || || ||||| ||||| Sbjct: 271 agagtgcggccatcttcgagctgtttgccagcgaaaatgagacgttgttggtctggtgg 213
>dbj|AB070528.1| Physarum polycephalum ub4 mRNA for ubiquitin 4, complete cds Length = 1266 Score = 117 bits (59), Expect = 2e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1106 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcgga 1047 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| || ||||| ||||| ||||| Sbjct: 1046 gagggtgcgtccatcctcgagttgcttgccagcgaagat 1008 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||||||| ||||| |||||||| || || |||||||| | Sbjct: 877 ccaccacggaggcggagcaccaagtgaagggtggactccttttgaatattgtagtcggag 818 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| |||||||| ||||||||||| Sbjct: 817 agggtgcgtccatcctcgagctgcttgccagcaaagat 780 Score = 99.6 bits (50), Expect = 6e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||| | Sbjct: 422 gccaccacgaaggcggagcaccaagtggagggtggactccttttgaatgttgtagtcgga 363 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| || ||||| || || ||||||||||| || ||||| Sbjct: 362 aagggtgcgtccatcctcgagttgctttccggcgaagatgaggcgttgttggtc 309 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||| ||||||||| ||||||||||| || |||||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggtggactccttctgaatattgtagtcgctg 134 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| || ||||| ||||| |||||||||||||| ||||| Sbjct: 133 agggtgcgtccatcctcgagttgctttccagcgaagatgaggcgctgttggtc 81 Score = 95.6 bits (48), Expect = 9e-17 Identities = 81/92 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggtggactccttttggatgttgtagtcggag 590 Query: 282 agagtgcggccatcctcaagctgcttaccagc 313 || ||||| |||||||| || ||||| ||||| Sbjct: 589 agggtgcgtccatcctcgagttgcttgccagc 558
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||| || ||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 5083 ccacgaaggcgaaggaccaaatggagcgtcgactccttctggatgttgtagtcggccaga 5024 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || |||||||| || |||||||| || |||||||| | |||||||||||||| ||||| Sbjct: 5023 gtccggccatcttctagctgcttgcccgcaaagatcaaacgctgctggtccggggggat 4965 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 5524 accaaatggagcgtcgactccttctggatgttgtaatcagcaagagtccggccatcctcg 5465 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| ||||| |||||||| | ||||||||||||||| Sbjct: 5464 agctgcttgccagcgaagatgagcctctgctggtccggtgg 5424 Score = 103 bits (52), Expect = 4e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| || | |||| ||| || || |||||||| ||||||||||||||||| Sbjct: 5315 gccaccacggagacgcaaaaccaggtgaagcgtagactccttttggatgttgtagtccgc 5256 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||||||||||| |||||||||||||| || || ||||| | |||||||||||||| || Sbjct: 5255 aagagtgcggccgtcctcaagctgcttgcctgcgaagatcaatcgctgctggtccggggg 5196 Query: 341 gatg 344 |||| Sbjct: 5195 gatg 5192 Score = 91.7 bits (46), Expect = 1e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||| ||||| || || |||||||||||||||||||| |||||||| |||||||| || Sbjct: 4840 accaaatggagcgtggattccttctggatgttgtagtcggccagagtccggccatcttct 4781 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| || |||||||| | |||||||||||||| Sbjct: 4780 agctgcttgcccgcaaagatcaaacgctgctggtccgg 4743 Score = 85.7 bits (43), Expect = 9e-14 Identities = 76/87 (87%) Strand = Plus / Minus Query: 251 ggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacc 310 |||||||||||||||||||||||| ||||| || ||||| || ||||| |||||||| || Sbjct: 4373 ggtcgactccttctggatgttgtaatccgcgagcgtgcgcccctcctcgagctgcttgcc 4314 Query: 311 agcaaagatgaggcgctgctggtccgg 337 |||||||| | |||||||||||||| Sbjct: 4313 ggcaaagatcaatcgctgctggtccgg 4287 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||| ||||| || || ||||| |||||||||||||| || ||||| |||||||| || Sbjct: 4612 accaaatggagcgtagattccttttggatgttgtagtcggcaagagtccggccatcttct 4553 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| || |||||||| | |||||||||||||| |||||| Sbjct: 4552 agctgcttgccggcaaagatcaatcgctgctggtccggagggatg 4508
>gb|AY099122.1| Lotharella amoeboformis isolate pub2 polyubiquitin gene, partial cds Length = 295 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||| || | ||| ||||| ||||||||||||||||||||||| || Sbjct: 207 ccaccacgaagacggaggacgaggtgcagggtagactccttctggatgttgtagtcggca 148 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| ||||| ||||||||||||||||| || || ||| Sbjct: 147 agggtgcggccatcctccagctgctttccagcgaagatgaggcgctgctgatcaggaggg 88 Query: 342 atg 344 ||| Sbjct: 87 atg 85
>dbj|AB182939.1| Populus nigra PnUB1 mRNA for polyubiquitin, complete cds Length = 1146 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| || || Sbjct: 911 ccaccacggaggcggagaaccaagtggagggtagactccttctgaatgttgtaatcagct 852 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| || ||||||||||| ||||| ||||||||||| || | ||| ||||| || ||| Sbjct: 851 agagtacgcccatcctcaagttgcttgccagcaaagatcagcctctgttggtctggaggg 792 Query: 342 atg 344 ||| Sbjct: 791 atg 789 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||| || || ||||||||||| |||||||| || || ||||| || |||||| Sbjct: 668 agcaccaagtgaagagtagactccttctgaatgttgtaatcagctagagtacgtccatcc 609 Query: 297 tcaagctgcttaccagcaaagat 319 ||||| ||||| ||||||||||| Sbjct: 608 tcaagttgcttgccagcaaagat 586 Score = 69.9 bits (35), Expect = 5e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| || || ||||| ||||| |||||||| ||||||||||| || || || || || Sbjct: 456 gccacctcgaagacggagaaccaaatggagggtggactccttctgtatattataatcagc 397 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || |||||||||||||| |||||||| || |||||||| Sbjct: 396 aagggtgcggccatcctcgagctgctttccggcaaagat 358 Score = 60.0 bits (30), Expect = 5e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| ||||| | ||| || || |||||||||||||| ||||| || ||| Sbjct: 1139 ccaccacggaggcgaagcacgaggtgcagagtagactccttctggatattgtaatctgcc 1080 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 | || | ||||| ||||||||||| || ||||| || | | ||||||||| |||||| Sbjct: 1079 aaggtccttccatcttcaagctgcttcccggcaaaaatcaacctctgctggtctggtggg 1020 Query: 342 at 343 || Sbjct: 1019 at 1018 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || || ||||| |||||||| || || || || || || ||||||||| Sbjct: 209 accaagtggagagtggattccttttggatgttataatcagcaagggttcgtccatcctca 150 Query: 300 agctgcttaccagcaaagat 319 ||||| || ||||||||||| Sbjct: 149 agctgtttgccagcaaagat 130
>gb|AF116772.1|AF116772 Lilium longiflorum polyubiquitin mRNA, complete cds Length = 709 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| | |||||||||||||||||||||||| || ||||| || || || |||||||| Sbjct: 283 gccacccctgaggcggagcaccaagtggagggtggattccttgtgaatattatagtccgc 224 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||| || ||||| || |||||||| ||||| |||||||| |||||||||||||| || Sbjct: 223 cagagtacgtccatcttccagctgcttcccagcgaagatgagtcgctgctggtccggagg 164 Query: 341 gat 343 ||| Sbjct: 163 gat 161 Score = 83.8 bits (42), Expect = 3e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||| || |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct: 504 ccaccacgaaggcgtaggaccaagtgcagggtagattccttttggatgttgtagtcagcc 445 Query: 282 agagtgcggccatcctca 299 ||||| |||||||||||| Sbjct: 444 agagtacggccatcctca 427
>emb|X15338.1|NCUBI3 Neurospora crassa UBI 3 mRNA for ubiquitin fusion protein Length = 611 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| | Sbjct: 212 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 153 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 152 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 93 Query: 342 atg 344 ||| Sbjct: 92 atg 90
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | ||| ||||| ||||||||||||||||| ||||| || Sbjct: 563 ccaccacggaggcgcaggacaaggtgcagggtggactccttctggatgttatagtcggca 504 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || || |||||||||||||||||||| || ||| Sbjct: 503 agggtgcggccatcctcgagctgcttgccggcgaagatgaggcgctgctggtctggaggg 444 Query: 342 atg 344 ||| Sbjct: 443 atg 441 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| |||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 308 agggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 249 Query: 309 ccagcaaagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| ||||| Sbjct: 248 ccagcgaagatgaggcgctgctggtctggtgg 217 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| |||||||| | ||| ||||||||||||||||| ||||| || || Sbjct: 104 ccacgaaggcggaggaccaagtgcaaggtggactccttctggatgttatagtcagcaagg 45 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctg 328 |||||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 44 gtgcggccgtcctcaagctgcttgccagcgaagatgagccgctg 1
>gb|U29158.1|ZMU29158 Zea mays polyubiquitin (MubC5) mRNA, complete cds Length = 1381 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||||| |||||| || ||||||||||||||||||||| || Sbjct: 1165 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtctgct 1106 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||| |||||||| || |||||||| || ||||||||||| || ||| Sbjct: 1105 agggtgcggccatcctccagctgcttgccggcaaagatcagacgctgctggtctggaggg 1046 Query: 342 atg 344 ||| Sbjct: 1045 atg 1043 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||| ||||||||| ||||||||||||||||||||| || || || ||||||||||| Sbjct: 919 accaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcctcc 860 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 859 agctgcttgccagcaaagatcaggcgctgctggtccggtgg 819 Score = 109 bits (55), Expect = 6e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||||||||| ||||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 464 caccaagtggagggtgctctccttctgaatgttgtagtcggccagcgtgcgcccgtcctc 405 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 404 gagctgcttgccagcaaagatcaggcgctgctggtccgg 366 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||| ||||||||||| || || ||||| || ||| Sbjct: 694 agcaccaagtggagggtgctctccttctgaatgttgtagtcggcaagcgtgcgcccgtcc 635 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || ||||| ||||| |||||||||||||| |||||| Sbjct: 634 tcgagctgcttgccggcaaaaatgagccgctgctggtccggagggatg 587 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 ||||||||| || | ||||||||| ||||||||||||||||||||| || || ||||| Sbjct: 245 gaggcggagaacaaggtggagggtgctctccttctggatgttgtagtcggcaagtgtgcg 186 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct: 185 cccgtcctcgagctgcttgccagcgaagatgagccgctgctggtccgg 138
>emb|AJ937554.1| Collozoum inerme partial pub gene, isolate SP, clone 3 Length = 336 Score = 117 bits (59), Expect = 2e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| ||||| |||||||| |||||||| || ||||||||||||||||||||||| | Sbjct: 228 gccaccgcggagacggagcactaagtggagagtggactccttctggatgttgtagtcgga 169 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || ||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 168 gagggtgcgaccatcctcgagctgctttccagcaaagataaggcgctgctg 118
>gb|U01220.1|U01220 Neurospora crassaA ubiquitin/ribosomal protein S27a fusion protein (ubi/crp-6) gene, complete cds Length = 956 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| | Sbjct: 641 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 582 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||||||||| || || ||||| |||||||||||||| || ||| Sbjct: 581 agggtgcggccatcctcaagctgcttgccggcgaagatcaggcgctgctggtcagggggg 522 Query: 342 atg 344 ||| Sbjct: 521 atg 519
>gb|U01221.1|NCUBICRP6 Neurospora crassa 74OR23 1A ubiquitin/ribosomal protein S27a fusion protein (ubi/crp-6) mRNA, complete cds Length = 677 Score = 117 bits (59), Expect = 2e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| | Sbjct: 269 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 210 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||||||||| || || ||||| |||||||||||||| || ||| Sbjct: 209 agggtgcggccatcctcaagctgcttgccggcgaagatcaggcgctgctggtcagggggg 150 Query: 342 atg 344 ||| Sbjct: 149 atg 147
>dbj|AB045758.1| Physarum polycephalum ppub4 mRNA for polyubiquitin, complete cds Length = 1266 Score = 117 bits (59), Expect = 2e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1106 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcgga 1047 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| || ||||| ||||| ||||| Sbjct: 1046 gagggtgcgtccatcctcgagttgcttgccagcgaagat 1008 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||||||| ||||| |||||||| || || |||||||| | Sbjct: 877 ccaccacggaggcggagcaccaagtgaagggtggactccttttgaatattgtagtcggag 818 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| |||||||| ||||||||||| Sbjct: 817 agggtgcgtccatcctcgagctgcttgccagcaaagat 780 Score = 99.6 bits (50), Expect = 6e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||| | Sbjct: 422 gccaccacgaaggcggagcaccaagtggagggtggactccttttgaatgttgtagtcgga 363 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| || ||||| || || ||||||||||| || ||||| Sbjct: 362 aagggtgcgtccatcctcgagttgctttccggcgaagatgaggcgttgttggtc 309 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||| ||||||||| ||||||||||| || |||||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggtggactccttctgaatattgtagtcgctg 134 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || ||||| |||||||| || ||||| ||||| |||||||||||||| ||||| Sbjct: 133 agggtgcgtccatcctcgagttgctttccagcgaagatgaggcgctgttggtc 81 Score = 95.6 bits (48), Expect = 9e-17 Identities = 81/92 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggtggactccttttggatgttgtagtcggag 590 Query: 282 agagtgcggccatcctcaagctgcttaccagc 313 || ||||| |||||||| || ||||| ||||| Sbjct: 589 agggtgcgtccatcctcgagttgcttgccagc 558
>ref|NM_122069.2| Arabidopsis thaliana UBQ4; protein binding AT5G20620 (UBQ4) mRNA, complete cds Length = 1488 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || ||||||||||||||||||||||| || || Sbjct: 1234 ccaccacgaagacgaagaaccaagtgaagagtcgactccttctggatgttgtaatctgca 1175 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| || ||||||||||||||||| ||||| |||||||| | ||| |||||||||||| Sbjct: 1174 agagtccgaccatcctcaagctgcttcccagcgaagatgagtctctgttggtccggtggg 1115 Query: 342 at 343 || Sbjct: 1114 at 1113 Score = 101 bits (51), Expect = 1e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 |||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||||| Sbjct: 763 agcaccaaatgaagggttgactctttttggatgttgtaatcagcaagagtgcgaccatcc 704 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||||||||| |||||||| || | |||||||||||||||||| Sbjct: 703 tctagctgcttaccggcaaagataagcctctgctggtccggtgggat 657 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||| | |||||||| |||||||| ||||||||||| || || Sbjct: 1006 ccaccacggagacgaagcacaagatggagggtagactccttttggatgttgtaatcagcg 947 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| ||||| |||||||| || |||||||| ||||| | |||||| || ||||| Sbjct: 946 agtgtgcgtccatcttcaagctgttttccagcaaatatgagtctctgctgatctggtgg 888 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || || || |||||||||||||| || |||| ||||||||||| || Sbjct: 304 accaagtggagtgttgattctttctggatgttgtaatcagccaaggtgcggccatcttct 245 Query: 300 agctgcttaccagcaaagat 319 |||||||||||||| ||||| Sbjct: 244 agctgcttaccagcgaagat 225 Score = 60.0 bits (30), Expect = 5e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || || || | ||| || || |||||||| ||||| |||||||| || Sbjct: 550 ccaccacggagacgaaggacaaggtgaagagtagactccttttggatattgtagtcagca 491 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| | ||||| ||||||||||||||||| || || || | ||||||||||| ||| Sbjct: 490 agagtccttccatcttcaagctgcttaccagcgaaaataagtctttgctggtccggaggg 431 Query: 342 at 343 || Sbjct: 430 at 429
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||| Sbjct: 485 aggcgcagcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgt 426 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 425 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatg 372 Score = 107 bits (54), Expect = 2e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| |||||||| || ||||| ||||||||||||||||||||||| || || |||||| Sbjct: 257 aggcgcagcaccaaatgaagggttgactccttctggatgttgtagtcagcaagtgtgcgg 198 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 197 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatg 144 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||||||||||||||| || || || | |||||| Sbjct: 707 agcaccaagtggagggtgctctccttctggatgttgtagtcagcaagggtcctcccatcc 648 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || | |||||| || ||||||||||| || |||||||| ||||||||| Sbjct: 647 tccaactgcttgccggcaaagatgagacgttgctggtcaggtgggatg 600
>gb|AY251798.1| Lotharella amoeboformis ubiquitin/actin fusion protein 3 gene, partial cds Length = 706 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| || | ||| ||||| ||||||||||||||||||||||| || Sbjct: 207 ccaccacgaaggcggagaacaaggtgaagggtggactccttctggatgttgtagtcggca 148 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || |||||||||||||| |||||||| || || ||||||||||||||||| Sbjct: 147 agggtgcggccatcctcgagctgcttgcccgcgaagatgaggcgctgctg 98
>gb|AY251796.1| Lotharella amoeboformis ubiquitin/actin fusion protein 1 gene, partial cds Length = 706 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| ||||||||||| | ||| || || ||||||||||||||||||||||| || Sbjct: 207 ccaccacgaaggcggagcacaaggtgaagagtggactccttctggatgttgtagtcggca 148 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || |||||||||||||| |||||||| || || ||||||||||||||||| Sbjct: 147 agggtgcggccatcctcgagctgcttgcccgcgaagatgaggcgctgctg 98
>emb|X07452.1|TCUBIFUS Trypanosoma mRNA for FUS gene (ubiquitin fusion) Length = 536 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||||||||||||||| || || |||||||| ||||| |||||||| |||||| Sbjct: 276 gactccttctggatgttgtagtctgcaagcgtgcggccgtcctccagctgcttgccagca 217 Query: 315 aagatgaggcgctgctggtccggtgg 340 ||||| |||||||||||||||||||| Sbjct: 216 aagatcaggcgctgctggtccggtgg 191
>emb|X12853.1|ATUBQ4 Arabidopsis thaliana UBQ4 gene for polyubiquitin Length = 1149 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || ||||||||||||||||||||||| || || Sbjct: 1139 ccaccacgaagacgaagaaccaagtgaagagtcgactccttctggatgttgtaatctgca 1080 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| || ||||||||||||||||| ||||| |||||||| | ||| |||||||||||| Sbjct: 1079 agagtccgaccatcctcaagctgcttcccagcgaagatgagtctctgttggtccggtggg 1020 Query: 342 at 343 || Sbjct: 1019 at 1018 Score = 101 bits (51), Expect = 1e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 |||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||||| Sbjct: 668 agcaccaaatgaagggttgactctttttggatgttgtaatcagcaagagtgcgaccatcc 609 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||||||||| |||||||| || | |||||||||||||||||| Sbjct: 608 tctagctgcttaccggcaaagataagcctctgctggtccggtgggat 562 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||||||||| || || |||||||||||||| || |||| ||||||||||| || Sbjct: 209 accaagtggagggttgattctttctggatgttgtaatcagccaaggtgcggccatcttct 150 Query: 300 agctgcttaccagcaaagat 319 |||||||||||||| ||||| Sbjct: 149 agctgcttaccagcgaagat 130 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||| | |||||||| |||||||| ||||||||||| || || Sbjct: 911 ccaccacggagacgaagcacaagatggagggtagactccttttggatgttgtaatcagcg 852 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| ||||| |||||||| || |||||||| ||||| | |||||| || ||||| Sbjct: 851 agtgtgcgtccatcttcaagctgttttccagcaaatatgagtctctgctgatctggtgg 793 Score = 60.0 bits (30), Expect = 5e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || || || | ||| || || |||||||| ||||| |||||||| || Sbjct: 455 ccaccacggagacgaaggacaaggtgaagagtagactccttttggatattgtagtcagca 396 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| | ||||| ||||||||||||||||| || || || | ||||||||||| ||| Sbjct: 395 agagtccttccatcttcaagctgcttaccagcgaaaataagtctttgctggtccggaggg 336 Query: 342 at 343 || Sbjct: 335 at 334
>emb|AJ416499.1|POS416499 Pleurotus ostreatus partial mRNA for putative ubiquitin (ubq1 gene) Length = 729 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| |||||||| || | |||||||| || ||||||||||||||||| |||| Sbjct: 398 ccaccacgaaggcggaggacaagatggagggtggattccttctggatgttgtaatccgag 339 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 338 agggtgcgaccatcctcaagctgcttgccagcgaagatgaggcgctgttggtcgggtggg 279 Query: 342 at 343 || Sbjct: 278 at 277 Score = 91.7 bits (46), Expect = 1e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||| | ||||| |||||||| ||||||||||||||||| | | Sbjct: 170 ccaccacggaggcggagcacgagatggagagtcgactctttctggatgttgtagtcagac 111 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| || ||||||||||| || ||||| ||||| Sbjct: 110 agggtgcgaccgtcctcaagctgtttgccagcgaagat 73 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 ||||| ||||| || | |||||| || |||||||||||||||||||| || | |||||| Sbjct: 620 cggagacggagaacaaggtggagagtagactccttctggatgttgtaatcagaaagagtg 561 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctg 328 |||||||| || || ||||| || || ||||| |||||||| Sbjct: 560 cggccatcttcgagttgcttgccggcgaagataaggcgctg 520
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 287 ccaccacggagacggagcaccaagtgaagggtagactccttctggatgttgtagtcggca 228 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || || || |||||||| ||||||||||| |||||||| Sbjct: 227 agggtacgaccatcctccagctgcttaccggcaaagat 190 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||||||||| ||||| ||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 729 gagcaccaagtgaagggtactctctttctggatattgtagtcggccagagtgcgaccatc 670 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||| | ||||| ||||||||||| || | |||||||||||||||||| Sbjct: 669 ctccaattgctttccagcaaagataagtctctgctggtccggtgggat 622 Score = 77.8 bits (39), Expect = 2e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| ||||| || | ||||||||| |||||||| || ||||||||||| || Sbjct: 972 gccaccacggagacggaggacaaggtggagggttgactccttttgaatgttgtagtcagc 913 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||||| | || ||||| | |||||| ||||| |||||||| | ||||||||| || || Sbjct: 912 aagagtccttccgtcctccaactgctttccagcgaagatgagcctctgctggtctggagg 853 Query: 341 gat 343 ||| Sbjct: 852 gat 850 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||||||||| |||||||| |||||||| || || || || || |||||||| Sbjct: 498 caccaagtggagggtgctttccttctgaatgttgtaatcagcaagggtacgcccatcctc 439 Query: 299 aagctgcttaccagcaaagat 319 ||| ||||| || |||||||| Sbjct: 438 aagttgcttgccggcaaagat 418
>dbj|AB226270.1| Aspergillus oryzae cDNA, contig sequence: AoEST3130 Length = 665 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| || | |||||| || ||||||||||||||||||||||| | Sbjct: 270 ccaccacggagacggaggacgaggtggagagtggactccttctggatgttgtagtcgctc 211 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || |||||||||||||||||||||||||| || ||||| || ||||||||||| || ||| Sbjct: 210 agggtgcggccatcctcaagctgcttaccggcgaagatcagacgctgctggtcggggggg 151 Query: 342 at 343 || Sbjct: 150 at 149
>gb|AC149642.2| Medicago truncatula chromosome 2 BAC clone mth2-62p11, complete sequence Length = 95165 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || || || Sbjct: 64778 ccaccacggagacggagcaccaaatggagggtggactccttctggatgttataatcagca 64719 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || || || |||||||| |||||||| |||||||| || || ||||||||||| |||||| Sbjct: 64718 agggtacgcccatcctccagctgctttccagcaaaaatcagacgctgctggtcaggtggg 64659 Query: 342 at 343 || Sbjct: 64658 at 64657 Score = 85.7 bits (43), Expect = 9e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||||||||||||||| |||| || | |||||| |||||||| Sbjct: 64982 tggagagttgactccttctggatgttgtagtcagccaaggttctgccatcttcaagctgt 64923 Query: 306 ttaccagcaaagatgaggcgctgctggtccggtgg 340 || |||||||||||||| | ||||||||| ||||| Sbjct: 64922 tttccagcaaagatgagcctctgctggtctggtgg 64888 Score = 65.9 bits (33), Expect = 8e-08 Identities = 66/77 (85%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||| |||||||||||||| || || ||||| | |||||| ||||||||||| |||||| Sbjct: 65201 gactctttctggatgttgtaatcagcaagagttctgccatcttcaagctgctttccagca 65142 Query: 315 aagatgaggcgctgctg 331 || ||||| | |||||| Sbjct: 65141 aaaatgagcctctgctg 65125 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||| ||||| ||||| || || |||| ||| |||||||| ||||||||||| Sbjct: 65891 agggtggactctttctgaatgttataatcagccaaagtccggccatcttcaagctgcttc 65832 Query: 309 ccagcaaagat 319 ||||||||||| Sbjct: 65831 ccagcaaagat 65821 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagca 314 ||||||||||| ||||||||||| || || || | |||||||| | ||||| |||||| Sbjct: 66113 gactccttctgaatgttgtagtcagcaagggtccttccatcctccaattgcttcccagca 66054 Query: 315 aagat 319 ||||| Sbjct: 66053 aagat 66049
>dbj|AB070527.1| Physarum polycephalum ub3 mRNA for ubiquitin 3, complete cds Length = 1193 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 637 ccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcgctc 578 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 | ||||| |||||||| |||||||| || |||||||| Sbjct: 577 aaggtgcgtccatcctcgagctgctttccggcaaagat 540 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||||||||||||||| | ||| ||||||||||||||||||||| | || Sbjct: 1090 ccacgaaggcggagcaccaagtgcaaggtgctctccttctggatgttgtagtcggagagg 1031 Query: 285 gtgcggccatcctcaagctgctt 307 ||||| |||||||| |||||||| Sbjct: 1030 gtgcgtccatcctcgagctgctt 1008 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||||||||| | ||| ||||| |||||||| |||||||||||||| || Sbjct: 406 ccacgaaggcggagcacaaggtgaagggtggactccttatggatgttgtagtcgctcaag 347 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| |||||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct: 346 gtgcgaccatcctcgagttgcttgccagcgaagataaggcgttgttggtcaggggggat 288 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||||||||| | ||| ||||| ||||||||||| ||||||||||| | || Sbjct: 178 ccacgaaggcggagcacaaggtgaagggtggactccttctgaatgttgtagtcagaaagg 119 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | |||||||| |||||||| ||||| || ||||| || || ||||| || ||||| Sbjct: 118 gtccttccatcctcgagctgcttgccagcgaaaatgagacgttgttggtcaggggggat 60 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||||||| | ||| |||||||| || || |||||||| | || ||||| Sbjct: 856 aggcgaagcaccaagtgcaaggtggactccttttgaatattgtagtcggagagggtgcgt 797 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| ||||| ||||| || || ||||| ||||| || ||||| || ||||| Sbjct: 796 ccatcttcaagttgctttccggcgaagataaggcgttgttggtcaggggggat 744
>emb|BX829786.1|CNS0A19O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||| || || ||||||||||||||||||||||| |||| ||| || ||||||||| Sbjct: 192 accaagtgaagagtagactccttctggatgttgtagtcggccaaagtacgtccatcctca 251 Query: 300 agctgcttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 252 agctgctttccagcgaagatgagacgctgctggtccgg 289 Score = 81.8 bits (41), Expect = 1e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctc 298 ||||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 419 caccaagtgaagggtcgactccttctggatgttgtaatccgccaaagtacgaccatcctc 478 Query: 299 aagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | || || || |||||||| | | |||||||||||| ||||| Sbjct: 479 caattgttttccggcaaagatcaacctctgctggtccggagggat 523 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 255 gactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctt 307 ||||||||||| ||||||||||| |||| ||| | ||||| ||||| ||||| Sbjct: 663 gactccttctgaatgttgtagtcagccaaagttcttccatcttcaagttgctt 715
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||| ||||| | |||||||||||| ||||||||||||||||| || || Sbjct: 262 gccaccacggaggcgaagcacaaggtggagggtcgattccttctggatgttgtaatcggc 203 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || || ||||| ||||| |||||||| || || |||||||||||||||||||| Sbjct: 202 tagggttcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtc 149
>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 Length = 89490 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || ||||||||||||||||||||||| || || Sbjct: 6307 ccaccacgaagacgaagaaccaagtgaagagtcgactccttctggatgttgtaatctgca 6366 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| || ||||||||||||||||| ||||| |||||||| | ||| |||||||||||| Sbjct: 6367 agagtccgaccatcctcaagctgcttcccagcgaagatgagtctctgttggtccggtggg 6426 Query: 342 at 343 || Sbjct: 6427 at 6428 Score = 101 bits (51), Expect = 1e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 |||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||||| Sbjct: 6778 agcaccaaatgaagggttgactctttttggatgttgtaatcagcaagagtgcgaccatcc 6837 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||||||||| |||||||| || | |||||||||||||||||| Sbjct: 6838 tctagctgcttaccggcaaagataagcctctgctggtccggtgggat 6884 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||| | |||||||| |||||||| ||||||||||| || || Sbjct: 6535 ccaccacggagacgaagcacaagatggagggtagactccttttggatgttgtaatcagcg 6594 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| ||||| |||||||| || |||||||| ||||| | |||||| || ||||| Sbjct: 6595 agtgtgcgtccatcttcaagctgttttccagcaaatatgagtctctgctgatctggtgg 6653 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 ||||||||||| || || || |||||||||||||| || |||| ||||||||||| || Sbjct: 7237 accaagtggagtgttgattctttctggatgttgtaatcagccaaggtgcggccatcttct 7296 Query: 300 agctgcttaccagcaaagat 319 |||||||||||||| ||||| Sbjct: 7297 agctgcttaccagcgaagat 7316 Score = 60.0 bits (30), Expect = 5e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || || || | ||| || || |||||||| ||||| |||||||| || Sbjct: 6991 ccaccacggagacgaaggacaaggtgaagagtagactccttttggatattgtagtcagca 7050 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| | ||||| ||||||||||||||||| || || || | ||||||||||| ||| Sbjct: 7051 agagtccttccatcttcaagctgcttaccagcgaaaataagtctttgctggtccggaggg 7110 Query: 342 at 343 || Sbjct: 7111 at 7112
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||| Sbjct: 342 aggcgcagcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgt 283 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 282 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatg 229 Score = 101 bits (51), Expect = 1e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||| ||||||||| ||||||||| |||||||| ||||| || ||||| Sbjct: 799 gaggcgcagcaccaggtggagggtgctctccttctgaatgttgtaatccgcaagggtgcg 740 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| |||||||| || |||||||| || |||||||||||||| |||||| Sbjct: 739 tccatcctccagctgcttgccggcaaagataagacgctgctggtccggcgggatg 685 Score = 97.6 bits (49), Expect = 2e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||||||||||| |||||||| |||||||||||||||||| || || || ||||| Sbjct: 1026 aggcggagcaccagatggagggtgctctccttctggatgttgtaatctgcaagggtgcga 967 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 |||||||| |||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 966 ccatcctccagctgcttgccggcgaagatgagccgctgctggtccggggggat 914 Score = 95.6 bits (48), Expect = 9e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 564 agcaccaagtggagggtgctctccttctgaatgttgtagtcggccagcgtgcgcccatcc 505 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || | |||||| || ||||| ||||| || ||||||||||| |||||| Sbjct: 504 tccaactgcttgccggcaaaaatgagacgttgctggtccggagggatg 457 Score = 81.8 bits (41), Expect = 1e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||||| ||||||||| |||||||||||| |||||||| || || ||||| ||| Sbjct: 1251 cggagcaccaggtggagggtgctctccttctggatattgtagtctgcaagggtgcgacca 1192 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1191 tcctccagctgcttgccggcgaagatcagacgctgctggtc 1151
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| |||||||| | |||||||||||||||||||||||| |||||||| || Sbjct: 456 gccaccacggagacggagcacaaggtggagggtcgactccttctggatattgtagtcggc 397 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgag 322 || |||||||||||||| ||||| || ||||| |||||||| Sbjct: 396 caaggtgcggccatcctcgagctgtttgccagcgaagatgag 355 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||||||||| || | ||||||||| |||||||| |||||||||||||| || Sbjct: 228 gccaccacggaggcggagtacaaggtggagggtggactccttttggatgttgtagtcagc 169 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaa 316 || ||||||||||||||||| ||||| |||||||| Sbjct: 168 aagggtgcggccatcctcaagttgcttgccagcaaa 133 Score = 107 bits (54), Expect = 2e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| |||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 1140 gccaccacggagacggagcacaaggtggagggtggactccttctggatattgtagtcggc 1081 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgag 322 || || ||||||||||| |||||||| ||||| |||||||| Sbjct: 1080 caaggtacggccatcctcgagctgcttgccagcgaagatgag 1039 Score = 107 bits (54), Expect = 2e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| |||||||| | ||||||||| |||||||||||||| |||||||| || Sbjct: 684 gccaccacggagacggagcacaaggtggagggtggactccttctggatattgtagtcggc 625 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgag 322 || || ||||||||||| |||||||| ||||| |||||||| Sbjct: 624 caaggtacggccatcctcgagctgcttgccagcgaagatgag 583 Score = 91.7 bits (46), Expect = 1e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| |||||||||||||||||||| || ||||||||||| || ||||| || Sbjct: 912 gccaccacggagacggagcaccaagtggagggtagattccttctggatattatagtcagc 853 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgag 322 || || ||||||||||| | ||||| ||||| |||||||| Sbjct: 852 caaggtacggccatcctccaattgcttgccagcgaagatgag 811 Score = 87.7 bits (44), Expect = 2e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 220 ggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccg 279 ||||||| ||||| || || |||| ||| || || || |||||||||||||| ||||| | Sbjct: 1597 ggccaccgcggagacgaaggaccaggtgaagagtggattccttctggatgttatagtctg 1538 Query: 280 ccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtg 339 |||| ||||| |||||||| ||||||||||| |||||||| || | ||| ||||| |||| Sbjct: 1537 ccagtgtgcgcccatcctcgagctgcttacccgcaaagatcagcctctgttggtctggtg 1478 Query: 340 ggat 343 |||| Sbjct: 1477 ggat 1474 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| || ||||||||||| || ||||| |||| || ||||||||| Sbjct: 1352 agcaccaagtggagggtagattccttctggatattatagtcagccaaggtacggccatcc 1293 Query: 297 tcaagctgcttaccagcaaagatgag 322 || | ||||| ||||| |||||||| Sbjct: 1292 tccaattgcttgccagcgaagatgag 1267
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||| Sbjct: 1442 aggcgcagcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgt 1383 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 1382 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatg 1329 Score = 101 bits (51), Expect = 1e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 230 gaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcg 289 |||||| ||||||| ||||||||| ||||||||| |||||||| ||||| || ||||| Sbjct: 1899 gaggcgcagcaccaggtggagggtgctctccttctgaatgttgtaatccgcaagggtgcg 1840 Query: 290 gccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| |||||||| || |||||||| || |||||||||||||| |||||| Sbjct: 1839 tccatcctccagctgcttgccggcaaagataagacgctgctggtccggcgggatg 1785 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||| ||||||||||||||||||||| || || || | |||||| Sbjct: 1664 agcaccaagtggagggtgctctccttctggatgttgtagtcagcaagggtcctcccatcc 1605 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || | |||||| || ||||||||||| || |||||||| ||||||||| Sbjct: 1604 tccaactgcttgccggcaaagatgagacgttgctggtcaggtgggatg 1557 Score = 83.8 bits (42), Expect = 3e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||||||||||||| ||||||||| |||||||| || || || ||||| Sbjct: 2126 aggcgcagcaccaagtggagggtgctctccttctgtatgttgtaatcagcaagtgtgcgt 2067 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||||||||| || || ||||| || ||||||||||| || |||||| Sbjct: 2066 ccgtcctcaagctgcttgccggcgaagataagccgctgctggtcaggagggatg 2013 Score = 81.8 bits (41), Expect = 1e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 234 cggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggcca 293 |||||||||| ||||||||| |||||||||||| |||||||| || || ||||| ||| Sbjct: 2351 cggagcaccaggtggagggtgctctccttctggatattgtagtctgcaagggtgcgacca 2292 Query: 294 tcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 2291 tcctccagctgcttgccggcgaagatcagacgctgctggtc 2251
>gb|U74318.1|SCU74318 Schizophyllum commune polyubiquitin mRNA, complete cds Length = 1079 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| |||||||| | |||||| || ||||||||||||||||||||||||| || Sbjct: 264 ccacggagacggagcacgaggtggagagtagactccttctggatgttgtagtccgaaagg 205 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 |||||||||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 204 gtgcggccatcctcgagctgcttgccggcgaagatcaggcgctgctggtc 155 Score = 103 bits (52), Expect = 4e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || || || | ||||||||||||||||||||| ||||||||||| | | Sbjct: 951 ccaccacggagacgaaggacaaggtggagggtcgactccttctgaatgttgtagtcagac 892 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || ||||| || ||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 891 agggtgcgaccgtcctccagctgcttgccggcgaagatgaggcgctgctgatccgg 836 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 |||||| ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 700 gtggagagtcgactccttctggatgttgtaatccgagagagtgcggccatcctcgagctg 641 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||| ||||| ||||| || |||||||| || || |||||| Sbjct: 640 cttgccagcgaagataagacgctgctgatcgggagggatg 601 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||| || |||||||| | || ||||| || |||||||| ||||| || Sbjct: 465 gtcgactccttctgaatattgtagtcggacaacgtgcgcccgtcctcaagttgcttcccg 406 Query: 312 gcaaagatgaggcgctgctggtc 334 |||||||| || ||||||||||| Sbjct: 405 gcaaagataagacgctgctggtc 383
>gb|AF031628.1|AF031628 Schizophyllum commune polyubiquitin (UBI1) gene, partial cds Length = 1167 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||| |||||||| | |||||| || ||||||||||||||||||||||||| || Sbjct: 972 ccacggagacggagcacgaggtggagagtagactccttctggatgttgtagtccgaaagg 913 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 |||||||||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 912 gtgcggccatcctcgagctgcttgccggcgaagatcaggcgctgctggtc 863 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Minus Query: 258 tccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaag 317 |||||||| || |||||||| | || ||||| || |||||||| ||||| || |||||| Sbjct: 1167 tccttctgaatattgtagtcggacaacgtgcgcccgtcctcaagttgcttcccggcaaag 1108 Query: 318 atgaggcgctgctggtc 334 || || ||||||||||| Sbjct: 1107 ataagacgctgctggtc 1091
>gb|U33014.1|ATU33014 Arabidopsis thaliana polyubiquitin (ubq4) gene, complete cds Length = 4056 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || || || |||||||| || ||||||||||||||||||||||| || || Sbjct: 3819 ccaccacgaagacgaagaaccaagtgaagagtcgactccttctggatgttgtaatctgca 3760 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| || ||||||||||||||||| ||||| |||||||| | ||| |||||||||||| Sbjct: 3759 agagtccgaccatcctcaagctgcttcccagcgaagatgagtctctgttggtccggtggg 3700 Query: 342 at 343 || Sbjct: 3699 at 3698 Score = 101 bits (51), Expect = 1e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 |||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||||| Sbjct: 3348 agcaccaaatgaagggttgactctttttggatgttgtaatcagcaagagtgcgaccatcc 3289 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || ||||||||||| |||||||| || | |||||||||||||||||| Sbjct: 3288 tctagctgcttaccggcaaagataagcctctgctggtccggtgggat 3242 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctca 299 |||||||||||||| || || |||||||||||||| || |||| ||||||||||| || Sbjct: 2889 accaagtggagggttgattctttctggatgttgtaatcagccaaggtgcggccatcttct 2830 Query: 300 agctgcttaccagcaaagat 319 |||||||||||||| ||||| Sbjct: 2829 agctgcttaccagcgaagat 2810 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || ||||| | |||||||| |||||||| ||||||||||| || || Sbjct: 3591 ccaccacggagacgaagcacaagatggagggtagactccttttggatgttgtaatcagcg 3532 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || ||||| ||||| |||||||| || |||||||| ||||| | |||||| || ||||| Sbjct: 3531 agtgtgcgtccatcttcaagctgttttccagcaaatatgagtctctgctgatctggtgg 3473 Score = 60.0 bits (30), Expect = 5e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| || || || | ||| || || |||||||| ||||| |||||||| || Sbjct: 3135 ccaccacggagacgaaggacaaggtgaagagtagactccttttggatattgtagtcagca 3076 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 ||||| | ||||| ||||||||||||||||| || || || | ||||||||||| ||| Sbjct: 3075 agagtccttccatcttcaagctgcttaccagcgaaaataagtctttgctggtccggaggg 3016 Query: 342 at 343 || Sbjct: 3015 at 3014
>dbj|AB045757.1| Physarum polycephalum ppub3 mRNA for polyubiquitin, complete cds Length = 1193 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 637 ccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcgctc 578 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 | ||||| |||||||| |||||||| || |||||||| Sbjct: 577 aaggtgcgtccatcctcgagctgctttccggcaaagat 540 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||||||||||||||| | ||| ||||||||||||||||||||| | || Sbjct: 1090 ccacgaaggcggagcaccaagtgcaaggtgctctccttctggatgttgtagtcggagagg 1031 Query: 285 gtgcggccatcctcaagctgctt 307 ||||| |||||||| |||||||| Sbjct: 1030 gtgcgtccatcctcgagctgctt 1008 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||||||||| | ||| ||||| |||||||| |||||||||||||| || Sbjct: 406 ccacgaaggcggagcacaaggtgaagggtggactccttatggatgttgtagtcgctcaag 347 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| |||||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct: 346 gtgcgaccatcctcgagttgcttgccagcgaagataaggcgttgttggtcaggggggat 288 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||||||||| | ||| ||||| ||||||||||| ||||||||||| | || Sbjct: 178 ccacgaaggcggagcacaaggtgaagggtggactccttctgaatgttgtagtcagaaagg 119 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || | |||||||| |||||||| ||||| || ||||| || || ||||| || ||||| Sbjct: 118 gtccttccatcctcgagctgcttgccagcgaaaatgagacgttgttggtcaggggggat 60 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 ||||| ||||||||||| | ||| |||||||| || || |||||||| | || ||||| Sbjct: 856 aggcgaagcaccaagtgcaaggtggactccttttgaatattgtagtcggagagggtgcgt 797 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||| ||||| ||||| || || ||||| ||||| || ||||| || ||||| Sbjct: 796 ccatcttcaagttgctttccggcgaagataaggcgttgttggtcaggggggat 744
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 113 bits (57), Expect = 4e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 213 acttacaggccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||||||||||| |||||| ||| ||| | ||| |||||||||||||||||| Sbjct: 30160 acttacaggccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttg 30219 Query: 273 tagtccgccagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctgg 332 || | || | |||||||||||||| |||||||| ||||||||||| || |||||||| Sbjct: 30220 taacctgctaaggtgcggccatcctcgagctgcttgccagcaaagatcagtcgctgctga 30279 Query: 333 tccgg 337 ||||| Sbjct: 30280 tccgg 30284 Score = 97.6 bits (49), Expect = 2e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 236 gagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatc 295 |||||| | ||| ||||| |||||||||||||| |||||||| ||||| ||||| || || Sbjct: 30411 gagcactaggtgaagggtagactccttctggatattgtagtcagccagggtgcgtccgtc 30470 Query: 296 ctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 30471 cttgagctgcttgccggcgaagatgaggcgctgctggtccggggggatg 30519 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| ||||| ||||| |||||||| || || || ||||| || |||||||| || Sbjct: 30879 gtggagggtggactctttctgaatgttgtaatctgcgagggtgcgtccgtcctcaagttg 30938 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| || ||||||||||||||||||||||| ||||| Sbjct: 30939 cttgcccgcaaagatgaggcgctgctggtcaggtgg 30974 Score = 65.9 bits (33), Expect = 8e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 267 atgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaagat 319 |||||||||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 30670 atgttgtagtccgccaaggtccgaccatcctcaagctgcttgccagcaaagat 30722
>gb|AY190601.1| Malus x domestica ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 729 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||| || Sbjct: 288 gccaccgcggaggcggagtaccaggtggagggtggactccttctggatgttgtagtcagc 229 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 || |||||| ||||| |||||||| || || || |||||||||||||||||||| Sbjct: 228 gagggtgcggttgtcctcgagctgcttgccggcgaaaatgaggcgctgctggtccgg 172
>gb|AY099120.1| Chlorarachnion CCMP621 isolate pub3 polyubiquitin mRNA, complete cds Length = 1108 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 |||||||| || | ||| ||||||||||||||||| |||||||| || || ||||||||| Sbjct: 976 aggcggagaacgaggtgaagggtcgactccttctgaatgttgtaatctgctagagtgcgg 917 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 916 ccgtcctcaagctgcttaccagcgaagatgagacgctgctg 876 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 |||||||| || | ||| ||||||||||||||||| |||||||| || || ||||||||| Sbjct: 745 aggcggagaacgaggtgaagggtcgactccttctgaatgttgtaatctgctagagtgcgg 686 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 685 ccgtcctcaagctgcttaccagcgaagatgagacgctgctg 645 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 |||||||| || | ||| ||||||||||||||||| |||||||| || || ||||||||| Sbjct: 514 aggcggagaacgaggtgaagggtcgactccttctgaatgttgtaatctgctagagtgcgg 455 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 454 ccgtcctcaagctgcttaccagcgaagatgagacgctgctg 414 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 231 aggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcgg 290 |||||||| || | ||| ||||||||||||||||| |||||||| || || ||||||||| Sbjct: 283 aggcggagaacgaggtgaagggtcgactccttctgaatgttgtaatctgctagagtgcgg 224 Query: 291 ccatcctcaagctgcttaccagcaaagatgaggcgctgctg 331 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 223 ccgtcctcaagctgcttaccagcgaagatgagacgctgctg 183
>gb|AY099125.1| Lotharella amoeboformis isolate pub5 polyubiquitin gene, partial cds Length = 526 Score = 113 bits (57), Expect = 4e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||||||||| || || | |||||| || ||||||||||| ||||||||||| || Sbjct: 438 ccaccacggaggcgaaggacgaggtggagtgtagactccttctgtatgttgtagtcagca 379 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtc 334 || |||||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 378 agggtgcggccgtcctcaagctgcttgccggcaaagatgagacgctgctggtc 326 Score = 83.8 bits (42), Expect = 3e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 |||||||||||||||||||||||| |||||||| || ||||||||||| || || ||||| Sbjct: 184 gtggagggtcgactccttctggatattgtagtcagcgagagtgcggccgtcttctagctg 125 Query: 305 cttaccagcaaagatgaggcgctgctggtc 334 ||| || || || || || ||||||||||| Sbjct: 124 cttgccggcgaaaataagacgctgctggtc 95
>gb|AY826135.1| Aedes albopictus clone AL_315 ribosomal protein S27a mRNA, complete cds Length = 471 Score = 111 bits (56), Expect = 1e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| | Sbjct: 228 gccaccacggaggcgcagcaccaagtgcagggtggactccttctggatgttgtagtcgga 169 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||||||||| || |||||||| || || ||||| | |||||||| || || || Sbjct: 168 cagggtgcggccatcttccagctgcttgccggcgaagatcaaacgctgctgatctggcgg 109 Query: 341 gatg 344 |||| Sbjct: 108 gatg 105
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 12389 cggaggcggagcaccaggtgaagcgtcgactccttctggatgttgtagtcggccagcgtg 12448 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 | ||| || || |||||||| || || |||||||| |||||||| ||||| ||||| Sbjct: 12449 cagccgtcttccagctgcttccccgcgaagatgagccgctgctgatccggcgggat 12504
>gb|BT012698.1| Lycopersicon esculentum clone 113569R, mRNA sequence Length = 1626 Score = 111 bits (56), Expect = 1e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||| Sbjct: 1184 agcaccaagtgcagggtcgactccttttggatgttatagtccgccaaagtgcggccatcc 1125 Query: 297 tcaagctgcttaccagcaaa 316 || |||||||| |||||||| Sbjct: 1124 tcgagctgcttgccagcaaa 1105 Score = 107 bits (54), Expect = 2e-20 Identities = 105/122 (86%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| || | ||| ||||| |||||||||||||| |||||||| || Sbjct: 1427 ccaccacggagacggaggacaaggtgcagggtggactccttctggatattgtagtcagca 1368 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 || ||||||||||||||||||||||||||||| || || | | ||||||||| |||||| Sbjct: 1367 agggtgcggccatcctcaagctgcttaccagcgaaaatcaacctctgctggtctggtggg 1308 Query: 342 at 343 || Sbjct: 1307 at 1306 Score = 107 bits (54), Expect = 2e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| || Sbjct: 515 ccaccacggagacggagcaccaaatggagggtggactccttctggatgttgtagtcagct 456 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||||||||| || | |||||| || |||||||| Sbjct: 455 agggtgcggccatcttccaactgctttcctgcaaagat 418 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||||||||| ||||| || | |||||||| ||||||||||||||||||||||| ||| Sbjct: 743 ccaccacggagacggaggacaagatggagggtagactccttctggatgttgtagtcagcc 684 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 683 agggtgcgaccatcctcgagctgctttccagcgaagat 646 Score = 95.6 bits (48), Expect = 9e-17 Identities = 81/92 (88%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||| || | ||| ||||||||||||||||||||||||||||| || Sbjct: 971 ccaccacgtagacggaggacaaggtgaagggtcgactccttctggatgttgtagtcggca 912 Query: 282 agagtgcggccatcctcaagctgcttaccagc 313 || |||||||| ||||| |||||||||||||| Sbjct: 911 agggtgcggccgtcctcgagctgcttaccagc 880 Score = 83.8 bits (42), Expect = 3e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 |||||||| || ||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 287 ccaccacgtagacggagcaccaaatggagggtggactccttctggatgttgtaatcagct 228 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagat 319 ||||| || || ||||| | |||||| ||||| ||||| Sbjct: 227 agagtacgtccgtcctccaactgctttccagcgaagat 190
>ref|XM_753127.1| Ustilago maydis 521 hypothetical protein (UM02073.1) partial mRNA Length = 1164 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 1127 gtcgactccttctggatgttgtagtccgagagcgtgcggccgtcttcaagctgcttacca 1068 Query: 312 gcaaagatgaggcgctgctggtccggtgggat 343 || |||||||| ||||||||||| || ||||| Sbjct: 1067 gcgaagatgagacgctgctggtcaggggggat 1036 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||||||||||||||||| || || ||||| || ||||||||||||||| Sbjct: 899 gtcgactccttctggatgttgtagtccgagagcgttcggccgtcttcaagctgcttacca 840 Query: 312 gcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| ||||||||||| || ||||| Sbjct: 839 gcaaagatgagacgctgctggtcaggggggat 808 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 653 gtcgactccttctggatgttgtagtccgagagcgtgcggccgtcttcaagctgcttacca 594 Query: 312 gcaaagatgaggcgctgctggtccggtgggat 343 || |||||||| ||||||||||| || ||||| Sbjct: 593 gcgaagatgagacgctgctggtcaggggggat 562 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||||||||||||||||| || || ||||| || ||||||||||||||| Sbjct: 425 gtcgactccttctggatgttgtagtccgagagcgttcggccgtcttcaagctgcttacca 366 Query: 312 gcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| ||||||||||| || ||||| Sbjct: 365 gcaaagatgagacgctgctggtcaggggggat 334 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttacca 311 |||||||||||||||||||||||||||| || || ||||| || ||||||||||||||| Sbjct: 197 gtcgactccttctggatgttgtagtccgagagcgttcggccgtcttcaagctgcttacca 138 Query: 312 gcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| ||||||||||| || ||||| Sbjct: 137 gcaaagatgagacgctgctggtcaggggggat 106
>ref|XM_504128.1| Yarrowia lipolytica CLIB122, YALI0E18986g predicted mRNA Length = 1146 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 1115 tggagagtggactccttctggatgttgtagtcggaaagagttcggccatcctcaagctgc 1056 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 1055 ttaccagcaaaaatcagtcgctgctggtccgg 1024 Score = 95.6 bits (48), Expect = 9e-17 Identities = 81/92 (88%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| ||||||||||| |||||| Sbjct: 887 tggagagtggactccttctgaatgttgtagtcagaaagagttcggccatcctcgagctgc 828 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 827 ttaccagcaaaaatcagtcgctgctggtccgg 796 Score = 87.7 bits (44), Expect = 2e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| || |||||||| |||||| Sbjct: 203 tggagagtggactccttctgaatgttgtagtcggaaagagttcgaccatcctcgagctgc 144 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 143 ttaccagcaaaaatcagtcgctgctggtccgg 112 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| || |||||||| |||||| Sbjct: 659 tggagagtggactccttctgaatgttgtagtcggaaagagttcgaccatcctcgagctgc 600 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| || || || |||||||||||||| Sbjct: 599 ttaccagcgaaaatcagtcgctgctggtccgg 568 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| || |||||||| |||||| Sbjct: 431 tggagagtggactccttctgaatgttgtagtcggaaagagttcgaccatcctcgagctgc 372 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| || || || |||||||||||||| Sbjct: 371 ttaccagcgaaaatcagtcgctgctggtccgg 340
>emb|X55717.1|PIUBIQ P. infestans polyubiquitin gene coding for ubiquitin Length = 1632 Score = 111 bits (56), Expect = 1e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| ||||| ||||||| ||| || || ||||||||||||||||||||||| Sbjct: 985 gccaccacgcaggcgaagcaccaggtgaagcgtagactccttctggatgttgtagtcgct 926 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||| ||||| |||||||||||||| ||||| || ||||||||||| || || Sbjct: 925 cagcgtgcggccgtcctccagctgcttaccagcgaagatcagacgctgctggtcaggagg 866 Query: 341 gatg 344 |||| Sbjct: 865 gatg 862 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| ||||| ||||||| ||| || || ||||||||||||||||||||||| ||| Sbjct: 1437 ccacgcaggcgaagcaccaggtgaagcgttgactccttctggatgttgtagtcgctcagc 1378 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| ||||| |||||||||||||| ||||| || ||||||||||| || |||||| Sbjct: 1377 gtgcggccgtcctccagctgcttaccagcgaagatcagacgctgctggtcaggagggatg 1318 Score = 87.7 bits (44), Expect = 2e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| ||||| ||||||| || || || ||||||||||||||||||||||| Sbjct: 1213 gccaccacgcaggcgaagcaccagatgaagcgttgactccttctggatgttgtagtcgct 1154 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| || ||||| ||||| |||||||||||||| ||||| || ||||| ||||| || || Sbjct: 1153 cagcgtacggccgtcctccagctgcttaccagcgaagatcagacgctgttggtcaggagg 1094 Query: 341 gatg 344 |||| Sbjct: 1093 gatg 1090
>emb|AJ437537.2|OSA437537 Oryza sativa partial mRNA for polyubiquitin-like protein (ub1 gene) Length = 660 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| || || | ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct: 450 cggaggcgcaggacaaggtgcagggtggattccttttggatgttgtagtctgcaagggtg 391 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 390 cggccatcctcgagctgcttcccagcaaagatgagacgctgctggtctggtgggat 335 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 ||||| |||||||| || | ||| | ||| ||||||||||||||||| || ||||| ||| Sbjct: 225 ccacgaaggcggaggacaaggtgcaaggtggactccttctggatgttataatccgcgaga 166 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 165 gtacgcccatcctcaagctgcttgccagcgaagataaggcgttgctggtccggagggatg 106 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/92 (86%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||| |||||||| || || || ||||| ||||||||||||||||| Sbjct: 657 agggtggactccttctgaatgttgtaatctgcaagggtgcgaccatcctcaagctgcttg 598 Query: 309 ccagcaaagatgaggcgc-tgctggtccggtg 339 ||||| ||||| |||||| |||||||| |||| Sbjct: 597 ccagcgaagatnaggcgcttgctggtctggtg 566
>emb|AJ000655.1|PB655UB Phreatamoeba balamuthi UBI1 sequence, putative polyubiquitin gene Length = 187 Score = 111 bits (56), Expect = 1e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 257 ctccttctggatgttgtagtccgccagagtgcggccatcctcaagctgcttaccagcaaa 316 |||||||||||||||||||||||| || |||||||| ||||| |||||||| || || || Sbjct: 172 ctccttctggatgttgtagtccgcgagcgtgcggccgtcctcgagctgctttccggcgaa 113 Query: 317 gatgaggcgctgctggtccggtgggatg 344 ||||||||||||||||||||| |||||| Sbjct: 112 gatgaggcgctgctggtccggagggatg 85
>gb|AY099142.1| Cercomonas ATCC50316 isolate pub4 polyubiquitin gene, partial cds Length = 766 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||| ||||| | ||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 669 cggaggcgaagcacgagatggagcgtggactccttctgaatgttgtagtccgcgagcgtg 610 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggat 343 || |||||||| ||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 609 cgaccatcctcgagctgtttgcccgcaaagatgaggcgctgctggtccggcgggat 554 Score = 105 bits (53), Expect = 9e-20 Identities = 101/117 (86%) Strand = Plus / Minus Query: 228 cggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtg 287 |||||||||||||| | |||||| |||||||||||||| |||||||||||||| || || Sbjct: 201 cggaggcggagcacgaggtggagcgtcgactccttctgaatgttgtagtccgcgagcgta 142 Query: 288 cggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 ||||| || || ||||| || || |||||||| ||||| ||||||||||| |||||| Sbjct: 141 cggccgtcttcgagctgtttgcccgcaaagatcaggcgttgctggtccggcgggatg 85 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| |||||||||||||| | ||| ||||| ||||||||||| |||||||||||||| Sbjct: 441 ccaccgcggaggcggagcacgaggtgaagggtggactccttctgaatgttgtagtccgcg 382 Query: 282 agagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtggg 341 |||||||| || ||||| ||||| || || || ||||| | |||||||||||||| ||| Sbjct: 381 agagtgcgaccgtcctcgagctgtttgccggcgaagatcaaacgctgctggtccggcggg 322 Query: 342 at 343 || Sbjct: 321 at 320
>gb|AY099137.1| Cercomonas edax isolate pub9 polyubiquitin gene, partial cds Length = 495 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 377 agggtcgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 318 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || || |||||||||||||| ||||| |||||| Sbjct: 317 ccggcgaaaatgaggcgctgctgatccggggggatg 282
>gb|AY099134.1| Cercomonas edax isolate pub6 polyubiquitin gene, partial cds Length = 298 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgctta 308 ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 180 agggttgactccttctggatgttgtagtcagccagggtgcggccgtcctcgagctgcttg 121 Query: 309 ccagcaaagatgaggcgctgctggtccggtgggatg 344 || || ||||||||||||||||| ||||| |||||| Sbjct: 120 ccggcgaagatgaggcgctgctgatccggggggatg 85
>gb|AY099129.1| Cercomonas edax isolate pub1 polyubiquitin gene, partial cds Length = 298 Score = 111 bits (56), Expect = 1e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || || ||||| | ||| ||||| ||||||||||||||||||||||| || Sbjct: 208 gccaccacgcagacgcagcacaaggtgaagggttgactccttctggatgttgtagtcagc 149 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||| ||||| |||||||| || || || |||||||||||||| ||||| || Sbjct: 148 cagggtgcggccgtcctcgagctgcttgccggcgaaaatgaggcgctgctgatccggggg 89 Query: 341 gatg 344 |||| Sbjct: 88 gatg 85
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || || Sbjct: 17165 gtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagttg 17224 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| || |||||||| ||||| Sbjct: 17225 cttgccagcaaagatgagacgttgctggtcaggtgg 17260 Score = 111 bits (56), Expect = 1e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 226 cacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagag 285 |||||||||||||||||| ||| | ||| ||||||||||| |||||||| || ||||| | Sbjct: 16918 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtg 16977 Query: 286 tgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | || |||||||| |||||||| | |||||||||||||||||||||||||| Sbjct: 16978 tacgtccatcctcgagctgcttgtctgcaaagatgaggcgctgctggtccgg 17029
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 111 bits (56), Expect = 1e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctg 304 ||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || || Sbjct: 145029 gtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagttg 145088 Query: 305 cttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| |||||||||||||| || |||||||| ||||| Sbjct: 145089 cttgccagcaaagatgagacgttgctggtcaggtgg 145124 Score = 111 bits (56), Expect = 1e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 226 cacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccagag 285 |||||||||||||||||| ||| | ||| ||||||||||| |||||||| || ||||| | Sbjct: 144782 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtg 144841 Query: 286 tgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccgg 337 | || |||||||| |||||||| | |||||||||||||||||||||||||| Sbjct: 144842 tacgtccatcctcgagctgcttgtctgcaaagatgaggcgctgctggtccgg 144893
>emb|X66876.1|AOPOLUBI A.officinalis mRNA for poly-ubiquitin Length = 743 Score = 111 bits (56), Expect = 1e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||||||||||||||||||||||||| |||||||| || || ||||| ||||||||| Sbjct: 283 agcaccaagtggagggtcgactccttctgaatgttgtaatcagcgagagtccggccatcc 224 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || || || ||||| ||||||||||| | ||||||||| || |||||| Sbjct: 223 tcgagttgtttaccggcaaagatgagcctctgctggtcaggggggatg 176 Score = 44.1 bits (22), Expect = 0.29 Identities = 70/86 (81%) Strand = Plus / Minus Query: 222 ccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgcc 281 ||||| ||||| || ||||| | |||||| || ||||||||||| || ||||| || || Sbjct: 526 ccaccgcggagacgaagcacaaggtggagagtagactccttctgaatattgtaatcagca 467 Query: 282 agagtgcggccatcctcaagctgctt 307 ||||| | ||||| ||||||||||| Sbjct: 466 agagtcctcccatcttcaagctgctt 441
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 2265777 tggagagtggactccttctggatgttgtagtcggaaagagttcggccatcctcaagctgc 2265718 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 2265717 ttaccagcaaaaatcagtcgctgctggtccgg 2265686 Score = 95.6 bits (48), Expect = 9e-17 Identities = 81/92 (88%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| ||||||||||| |||||| Sbjct: 2265549 tggagagtggactccttctgaatgttgtagtcagaaagagttcggccatcctcgagctgc 2265490 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 2265489 ttaccagcaaaaatcagtcgctgctggtccgg 2265458 Score = 87.7 bits (44), Expect = 2e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| || |||||||| |||||| Sbjct: 2264865 tggagagtggactccttctgaatgttgtagtcggaaagagttcgaccatcctcgagctgc 2264806 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 2264805 ttaccagcaaaaatcagtcgctgctggtccgg 2264774 Score = 87.7 bits (44), Expect = 2e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||| || || |||||||| |||||| Sbjct: 2264637 tggagagtggactccttctgaatgttgtagtcagacagggttcgaccatcctcgagctgc 2264578 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 ||||||||||| || || |||||||||||||| Sbjct: 2264577 ttaccagcaaaaatcagtcgctgctggtccgg 2264546 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| || |||||||| |||||| Sbjct: 2265321 tggagagtggactccttctgaatgttgtagtcggaaagagttcgaccatcctcgagctgc 2265262 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| || || || |||||||||||||| Sbjct: 2265261 ttaccagcgaaaatcagtcgctgctggtccgg 2265230 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcctcaagctgc 305 ||||| || ||||||||||| ||||||||||| | ||||| || |||||||| |||||| Sbjct: 2265093 tggagagtggactccttctgaatgttgtagtcggaaagagttcgaccatcctcgagctgc 2265034 Query: 306 ttaccagcaaagatgaggcgctgctggtccgg 337 |||||||| || || || |||||||||||||| Sbjct: 2265033 ttaccagcgaaaatcagtcgctgctggtccgg 2265002
>gb|U74358.1|MDU74358 Malus domestica ubiquitin mRNA, partial cds Length = 238 Score = 111 bits (56), Expect = 1e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 |||||||||||| || | |||||| ||||| || ||||||||||||||||||||||| || Sbjct: 238 gccaccacggagacgcaacaccaaatggagagtggactccttctggatgttgtagtcggc 179 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 || || ||||| |||||||||||||| ||||||||||| || | ||||||||| || || Sbjct: 178 aagggtacggccgtcctcaagctgctttccagcaaagataagcctctgctggtctggggg 119 Query: 341 gatg 344 |||| Sbjct: 118 gatg 115
>gb|U29160.1|ZMU29160 Zea mays clone MubG10 ubiquitin fusion protein gene, complete cds Length = 1437 Score = 111 bits (56), Expect = 1e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttgtagtccgccagagtgcggccatcc 296 ||||||| ||||||||| ||||||||||||||||||||||| || || ||||| || ||| Sbjct: 938 agcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcgaccgtcc 879 Query: 297 tcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 || |||||||| || || |||||||| |||||||||||||| |||||| Sbjct: 878 tcgagctgcttgccggcgaagatgagccgctgctggtccggggggatg 831
>gb|U03702.1|AEU03702 Affinetrina eburnea ubiquitin gene, partial cds Length = 228 Score = 111 bits (56), Expect = 1e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 225 ccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgccaga 284 |||||||||||||| || | ||||||||| ||||||||||||||||||||||||| || Sbjct: 224 ccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtccgaaagg 165 Query: 285 gtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgggatg 344 |||||||| ||||| |||||||| || ||||| || |||||||| || || ||||||||| Sbjct: 164 gtgcggccgtcctccagctgctttccggcaaaaatcaggcgctgttgatcgggtgggatg 105
>emb|CR663707.2|CNS0FB35 Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR712162.2|CNS0GCGE Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgcccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR720164.2|CNS0GIMI Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR723131.2|CNS0GKWX Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR722974.2|CNS0GKSK Tetraodon nigroviridis full-length cDNA Length = 453 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR722853.2|CNS0GKP7 Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR722615.2|CNS0GKIL Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60
>emb|CR722104.2|CNS0GK4E Tetraodon nigroviridis full-length cDNA Length = 452 Score = 109 bits (55), Expect = 6e-21 Identities = 106/123 (86%) Strand = Plus / Minus Query: 221 gccaccacggaggcggagcaccaagtggagggtcgactccttctggatgttgtagtccgc 280 ||||||||| || | |||||||||||| || || ||||||||||||||||||||||||| Sbjct: 182 gccaccacgaagtctgagcaccaagtgcagcgtggactccttctggatgttgtagtccga 123 Query: 281 cagagtgcggccatcctcaagctgcttaccagcaaagatgaggcgctgctggtccggtgg 340 ||| ||||| || ||||| |||||||| ||||||||||| || | ||||||||| || || Sbjct: 122 cagcgtgcgtccgtcctccagctgcttcccagcaaagatcagcctctgctggtcaggagg 63 Query: 341 gat 343 ||| Sbjct: 62 gat 60 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,279,376 Number of Sequences: 3902068 Number of extensions: 3279376 Number of successful extensions: 181445 Number of sequences better than 10.0: 2324 Number of HSP's better than 10.0 without gapping: 2304 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 175228 Number of HSP's gapped (non-prelim): 6074 length of query: 344 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 322 effective length of database: 17,147,199,772 effective search space: 5521398326584 effective search space used: 5521398326584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
