ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet45e09 |
|---|---|
| Clone Library Name | barley_pub |
>CHI1_THECC (Q41596) Endochitinase 1 precursor (EC 3.2.1.14)| Length = 321 Score = 83.6 bits (205), Expect = 1e-16 Identities = 36/47 (76%), Positives = 40/47 (85%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLS 252 G ECG+G N +V DRIGFYKRYCD LGVGYGNNLDCYNQRS+ +G S Sbjct: 271 GLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPS 317
>CHI1_GOSHI (Q39799) Endochitinase 1 precursor (EC 3.2.1.14)| Length = 324 Score = 82.0 bits (201), Expect = 3e-16 Identities = 35/47 (74%), Positives = 39/47 (82%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLS 252 G ECGKG N +V DRIGFYKRYCD+LGV YGNNLDCYNQ F +G+S Sbjct: 274 GLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVS 320
>CHI2_GOSHI (Q39785) Endochitinase 2 precursor (EC 3.2.1.14) (Fragment)| Length = 302 Score = 82.0 bits (201), Expect = 3e-16 Identities = 35/47 (74%), Positives = 39/47 (82%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLS 252 G ECGKG N +V DRIGFYKRYCD+LGV YGNNLDCYNQ F +G+S Sbjct: 252 GLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVS 298
>CHIC_SECCE (Q9FRV0) Basic endochitinase C precursor (EC 3.2.1.14) (Rye seed| chitinase-c) (RSC-c) Length = 266 Score = 79.3 bits (194), Expect = 2e-15 Identities = 33/42 (78%), Positives = 36/42 (85%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG GQ+ V DRIGFYKRYCD+LGVGYG+NLDCYNQR F Sbjct: 224 GLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
>CHI2_HORVU (P23951) 26 kDa endochitinase 2 precursor (EC 3.2.1.14) (CHI-26)| Length = 266 Score = 79.0 bits (193), Expect = 3e-15 Identities = 33/42 (78%), Positives = 36/42 (85%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG GQ+ V DRIGFYKRYCD+LGVGYGNNLDCY+QR F Sbjct: 224 GIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
>CHI1_HORVU (P11955) 26 kDa endochitinase 1 precursor (EC 3.2.1.14)| Length = 318 Score = 79.0 bits (193), Expect = 3e-15 Identities = 33/42 (78%), Positives = 36/42 (85%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG GQ+ V DRIGFYKRYCD+LGVGYGNNLDCY+QR F Sbjct: 276 GIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
>CHIA_SECCE (Q9FRV1) Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed| chitinase-a) (RSC-a) Length = 321 Score = 77.8 bits (190), Expect = 6e-15 Identities = 33/42 (78%), Positives = 35/42 (83%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG GQ+ V DRIGFYKRYCD+L VGYGNNLDCYNQR F Sbjct: 279 GIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
>CHI2_PEA (P21226) Endochitinase A2 precursor (EC 3.2.1.14)| Length = 324 Score = 76.6 bits (187), Expect = 1e-14 Identities = 31/46 (67%), Positives = 37/46 (80%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+GQ+ V DRIGFYKRYCD+ G+GYG+NLDCY+QR F L Sbjct: 266 GLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSL 311
>CHIB_VITVI (P51613) Basic endochitinase precursor (EC 3.2.1.14)| Length = 314 Score = 76.3 bits (186), Expect = 2e-14 Identities = 34/46 (73%), Positives = 36/46 (78%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECGKG P+V DRIGFYKRYCD+L V YGNNLDC NQR F GL Sbjct: 264 GVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGL 309
>CHIT_PHAVU (P06215) Endochitinase precursor (EC 3.2.1.14)| Length = 328 Score = 76.3 bits (186), Expect = 2e-14 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+GQ+ V DRIGF+KRYCD+LGVGYGNNLDCY+Q F + L Sbjct: 274 GLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSL 319
>CHI5_PHAVU (P36361) Endochitinase CH5B precursor (EC 3.2.1.14)| Length = 327 Score = 76.3 bits (186), Expect = 2e-14 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+GQ+ V DRIGF+KRYCD+LGVGYGNNLDCY+Q F + L Sbjct: 273 GLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSL 318
>CHIB_ARATH (P19171) Basic endochitinase B precursor (EC 3.2.1.14)| (Pathogenesis-related protein 3) (PR-3) (AtChiB) Length = 335 Score = 73.9 bits (180), Expect = 8e-14 Identities = 31/46 (67%), Positives = 37/46 (80%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+GQ+ V DRIGFY+RYC++ GV G NLDCYNQRSF +GL Sbjct: 285 GLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSFVNGL 330
>CHIB_LYCES (Q05540) Acidic 27 kDa endochitinase precursor (EC 3.2.1.14)| Length = 247 Score = 73.2 bits (178), Expect = 1e-13 Identities = 30/44 (68%), Positives = 37/44 (84%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFED 261 G ECGKGQNP+V DRIGFY+RYC +L V G+NLDCY+QR+F + Sbjct: 203 GIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNFAE 246
>CHI1_ORYSA (P24626) Basic endochitinase 1 precursor (EC 3.2.1.14)| Length = 320 Score = 72.8 bits (177), Expect = 2e-13 Identities = 30/42 (71%), Positives = 35/42 (83%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG G + +V DRIGFYKRYCD+LGV YG+NLDCYNQR + Sbjct: 276 GVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
>CHI2_BRANA (Q09023) Endochitinase CH25 precursor (EC 3.2.1.14)| Length = 322 Score = 72.4 bits (176), Expect = 2e-13 Identities = 30/42 (71%), Positives = 35/42 (83%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG+GQ+ V DRIGFY+RYC++LGV G NLDCYNQRSF Sbjct: 270 GLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311
>CHI2_ORYSA (P25765) Basic endochitinase 2 precursor (EC 3.2.1.14)| Length = 336 Score = 70.5 bits (171), Expect = 9e-13 Identities = 28/40 (70%), Positives = 33/40 (82%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQR 273 G ECG G++ + DRIGFYKRYCD+LGV YG NLDCY+QR Sbjct: 278 GLECGHGEDDRIADRIGFYKRYCDILGVSYGANLDCYSQR 317
>CHI1_TOBAC (P08252) Endochitinase A precursor (EC 3.2.1.14) (CHN-A)| Length = 329 Score = 69.3 bits (168), Expect = 2e-12 Identities = 30/46 (65%), Positives = 36/46 (78%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+G + V DRIGFY+RYC +LGV G+NLDC NQRSF +GL Sbjct: 279 GLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGL 324
>CHI2_TOBAC (P24091) Endochitinase B precursor (EC 3.2.1.14) (CHN-B)| Length = 324 Score = 69.3 bits (168), Expect = 2e-12 Identities = 30/46 (65%), Positives = 36/46 (78%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+G + V DRIGFY+RYC +LGV G+NLDC NQRSF +GL Sbjct: 274 GLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGL 319
>CHI3_SOLTU (P52405) Endochitinase 3 precursor (EC 3.2.1.14) (Fragment)| Length = 318 Score = 68.2 bits (165), Expect = 5e-12 Identities = 30/46 (65%), Positives = 35/46 (76%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG G + V DRIGFY+RYC +LGV G+NLDC NQRSF +GL Sbjct: 268 GLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGL 313
>CHI1_SOLTU (P52403) Endochitinase 1 precursor (EC 3.2.1.14) (Fragment)| Length = 318 Score = 68.2 bits (165), Expect = 5e-12 Identities = 30/46 (65%), Positives = 35/46 (76%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG G + V DRIGFY+RYC +LGV G+NLDC NQRSF +GL Sbjct: 268 GLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGL 313
>CHI2_SOLTU (P52404) Endochitinase 2 precursor (EC 3.2.1.14) (Fragment)| Length = 316 Score = 68.2 bits (165), Expect = 5e-12 Identities = 30/46 (65%), Positives = 35/46 (76%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG G + V DRIGFY+RYC +LGV G+NLDC NQRSF +GL Sbjct: 266 GLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGL 311
>CHIC_LYCES (Q05538) Basic 30 kDa endochitinase precursor (EC 3.2.1.14)| Length = 322 Score = 67.8 bits (164), Expect = 6e-12 Identities = 30/46 (65%), Positives = 34/46 (73%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG G + V DRIGFY+RYC +LGV G NLDC NQRSF +GL Sbjct: 272 GLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGL 317
>CHI3_TOBAC (P29059) Endochitinase 3 precursor (EC 3.2.1.14)| Length = 334 Score = 67.0 bits (162), Expect = 1e-11 Identities = 28/46 (60%), Positives = 34/46 (73%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG G + V DRIGFY+RYC +LGV G+N+DC NQ+SF GL Sbjct: 284 GLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGL 329
>CHIP_TOBAC (P17513) Acidic endochitinase P precursor (EC 3.2.1.14)| (Pathogenesis-related protein P) (PR-P) Length = 253 Score = 65.5 bits (158), Expect = 3e-11 Identities = 28/45 (62%), Positives = 33/45 (73%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDG 258 G ECG G N V DRIG+Y+RYC +L V G+NLDCYNQR+F G Sbjct: 209 GIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNFAQG 253
>CHIQ_TOBAC (P17514) Acidic endochitinase Q precursor (EC 3.2.1.14)| (Pathogenesis-related protein Q) (PR-Q) Length = 253 Score = 65.1 bits (157), Expect = 4e-11 Identities = 28/45 (62%), Positives = 33/45 (73%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDG 258 G ECG G+N V DRIG+Y+RYC +L V G NLDCYNQR+F G Sbjct: 209 GIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFGQG 253
>CHIX_PEA (P36907) Endochitinase precursor (EC 3.2.1.14)| Length = 320 Score = 64.7 bits (156), Expect = 5e-11 Identities = 28/42 (66%), Positives = 31/42 (73%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G ECG GQ+ V DR+GFYKRYC + GV G NLDC NQRSF Sbjct: 278 GIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
>CHI6_POPTR (P16579) Acidic endochitinase WIN6 precursor (EC 3.2.1.14)| Length = 340 Score = 64.3 bits (155), Expect = 7e-11 Identities = 31/48 (64%), Positives = 34/48 (70%), Gaps = 1/48 (2%) Frame = -3 Query: 392 GRECGKG-QNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLS 252 G ECG+G N DRIGFYK+YCD LG YG+NLDCY QR F GLS Sbjct: 287 GIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGLS 334
>CHIT_SOLTU (P05315) Endochitinase precursor (EC 3.2.1.14)| Length = 328 Score = 63.9 bits (154), Expect = 9e-11 Identities = 28/46 (60%), Positives = 34/46 (73%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+G + V DRIGFY+RYC +LGV G+NLDC NQR F + L Sbjct: 278 GLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNAL 323
>CHIT_PETHY (P29021) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 254 Score = 62.4 bits (150), Expect = 3e-10 Identities = 26/44 (59%), Positives = 33/44 (75%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFED 261 G ECGKGQN V DRIG+Y+R ++ V G+NLDCYNQR+F + Sbjct: 210 GIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNFAE 253
>CHID_LYCES (Q05537) Basic endochitinase (EC 3.2.1.14) (Fragment)| Length = 246 Score = 60.8 bits (146), Expect = 7e-10 Identities = 26/42 (61%), Positives = 30/42 (71%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSF 267 G EC G N + +RIGFY+RYC +LGV GNNLDC NQR F Sbjct: 204 GMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPF 245
>CHIB_POPTR (P29031) Acidic endochitinase WIN6.2B precursor (EC 3.2.1.14)| Length = 303 Score = 59.3 bits (142), Expect = 2e-09 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Frame = -3 Query: 392 GRECGKG-QNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGL 255 G ECG+G N +RIGFYK YCD LG YG+NLDCY QR F GL Sbjct: 250 GIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGL 296
>CHIA_LYCCI (Q40114) Acidic endochitinase pcht28 precursor (EC 3.2.1.14)| Length = 253 Score = 57.4 bits (137), Expect = 8e-09 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDG 258 G EC G N V RIGFY+RYC +L V G NLDC NQ++F G Sbjct: 209 GLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNFAQG 253
>CHIA_LYCES (Q05539) Acidic 26 kDa endochitinase precursor (EC 3.2.1.14)| Length = 253 Score = 56.6 bits (135), Expect = 1e-08 Identities = 24/43 (55%), Positives = 28/43 (65%) Frame = -3 Query: 386 ECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDG 258 ECG G N RIGFY+RYC +L V G NLDC NQ++F G Sbjct: 211 ECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNFAQG 253
>CHI8_POPTR (P16061) Endochitinase WIN8 precursor (EC 3.2.1.14)| Length = 316 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/44 (50%), Positives = 27/44 (61%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFED 261 G EC K +RI +Y RYCD+L V G+NL C NQ +FED Sbjct: 263 GGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETFED 306
>CHIT_DIOJA (P80052) Acidic endochitinase (EC 3.2.1.14)| Length = 250 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDC 285 G+EC +++ R+G+Y+ YC LGV GNNL C Sbjct: 215 GQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
>CHI4_SOLTU (P52406) Endochitinase 4 precursor (EC 3.2.1.14) (Fragment)| Length = 302 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDV 318 G ECG+G + V DRIGFY+RYC + Sbjct: 278 GLECGRGSDSRVQDRIGFYRRYCGI 302
>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14) (Agglutinin)| (UDA) Length = 372 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/19 (78%), Positives = 18/19 (94%) Frame = -3 Query: 347 IGFYKRYCDVLGVGYGNNL 291 IGFYKRYCD+LGV YG++L Sbjct: 333 IGFYKRYCDMLGVSYGHDL 351
>CHIB_MAIZE (P29023) Endochitinase B precursor (EC 3.2.1.14) (Seed chitinase B)| (Fragment) Length = 269 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = -3 Query: 386 ECGKGQNPEVVD-RIGFYKRYCDVLGVGYGNNLDC 285 ECG G NP ++ R+G+Y++YC LGV G NL C Sbjct: 236 ECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
>CHIP_BETVU (P42820) Acidic endochitinase SP2 precursor (EC 3.2.1.14)| Length = 288 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -3 Query: 386 ECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDC 285 EC + DRI FYK+YC GV G+NL C Sbjct: 255 ECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
>CHI4_BRANA (Q06209) Basic endochitinase CHB4 precursor (EC 3.2.1.14)| Length = 268 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = -3 Query: 392 GRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDC 285 G EC G + V RI +Y+ YC LGV G NL C Sbjct: 233 GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
>CHI4_PHAVU (P27054) Endochitinase PR4 precursor (EC 3.2.1.14)| Length = 270 Score = 33.9 bits (76), Expect = 0.096 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -3 Query: 386 ECGKGQNPEVVD-RIGFYKRYCDVLGVGYGNNLDC 285 EC G NP V R+ +Y YC LGV G+NL C Sbjct: 237 ECD-GANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
>CHIA_MAIZE (P29022) Endochitinase A precursor (EC 3.2.1.14) (Seed chitinase A)| Length = 280 Score = 33.1 bits (74), Expect = 0.16 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -3 Query: 386 ECGKGQNPEVVD-RIGFYKRYCDVLGVGYGNNLDC 285 EC G NP ++ R+G+YK+YC L V G NL C Sbjct: 247 ECN-GNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
>FZD8_XENLA (O93274) Frizzled 8 precursor (Frizzled-8) (Fz-8) (Xfz8)| Length = 581 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Frame = +2 Query: 239 TRVQPRARLQRTSGCSSQGCFHSLPQ-----GRHSIACRTQSGQPPRGSAPSRTP 388 TRV+P R +GC S GC P RH + R ++GQ P + P P Sbjct: 173 TRVEPPRSRSRATGCES-GCQCRAPMVQVSNERHPLYNRVRTGQIPNCAMPCHNP 226
>ENV_SIVV1 (P27757) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 768 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = -2 Query: 129 NCMGLFIIC-VTW--SQINNLEVYSVHIHLNIKASKGRS 22 NC G F C + W + +NNL V + H H A KGRS Sbjct: 396 NCQGEFFYCKMDWFLNYLNNLTVDADHNHCKNNAGKGRS 434
>PHOSP_NDVA (P16073) Phosphoprotein (Protein P) [Contains: Nonstructural| protein C, 38 kDa isoform; Nonstructural protein C, 29 kDa isoform] Length = 395 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 260 RLQRTSGCSSQGCFHSLPQGRHSIACRTQSGQPPRGSAPSR 382 +L S + +G + SL +G H + + Q QP RG++ R Sbjct: 123 KLSNKSSNAKKGPWSSLQEGHHQLPTQQQGSQPSRGNSQER 163
>GLYA_BLOPB (Q492D5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 83 FICDHVTHMINNPIQFKITIKILFIC 160 +ICD + H+ NN I F I K+L IC Sbjct: 381 WICDILNHIDNNEIIFSIKNKVLRIC 406
>CN032_MOUSE (Q8BH93) Protein C14orf32 homolog| Length = 242 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/47 (38%), Positives = 21/47 (44%) Frame = +2 Query: 248 QPRARLQRTSGCSSQGCFHSLPQGRHSIACRTQSGQPPRGSAPSRTP 388 +P A +G SSQG S P S SG PP +APS P Sbjct: 18 KPPAVTNTKAGHSSQGWPGSSPWSNPSAPPAMPSGLPPSSAAPSTVP 64
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +2 Query: 284 SSQGC---FHSLPQGRHSIACRTQSGQ--PPRGSAPSRTP 388 SSQG S P+G+ C T PPRG +PSR P Sbjct: 166 SSQGAACPLMSRPEGKAGDGCGTAGAHKGPPRGLSPSRQP 205
>EIN3_ARATH (O24606) ETHYLENE-INSENSITIVE3 protein| Length = 628 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 9/43 (20%) Frame = +2 Query: 281 CSSQGCFHS-LPQG--------RHSIACRTQSGQPPRGSAPSR 382 C + GC HS + +G H +AC + + P G+APSR Sbjct: 397 CENLGCAHSEISRGFLDRNSRDNHQLACPHRDSRLPYGAAPSR 439
>TILS_NEIMB (Q4W568) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -3 Query: 374 GQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLSAGLASQ*KR 225 G +P D F + YCD+LGVG C ++GL A++ KR Sbjct: 50 GLSPRADDWADFCQNYCDMLGVGLETVKVCVE----KNGLGIEAAARQKR 95
>TILS_NEIMA (Q9JUE9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -3 Query: 374 GQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLSAGLASQ*KR 225 G +P D F + YCD+LGVG C ++GL A++ KR Sbjct: 50 GLSPRADDWADFCQNYCDMLGVGLETVKVCVE----KNGLGIEAAARQKR 95
>CTL1_TORMA (Q9I9B9) Choline transporter-like protein 1| Length = 646 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 21 WICLLMLLCSSGYAQSTPQDYL 86 WI +L+LL ++GY Q Q Y+ Sbjct: 345 WIAVLLLLATAGYPQKKDQGYV 366
>TGT_XYLFA (Q9PGS5) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 384 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = -1 Query: 364 PRWLTGLGSTSDTVTSLG*AMETTLTATTRGPLKTGSRLDSRHSENGQ*HQGFFNTKDSN 185 PR+L G+G D V S+ RG + +RH+ NGQ GF K N Sbjct: 243 PRYLMGVGRPEDLVESVA-----------RGVDMFDCVMPTRHARNGQYFTGFGTVKIRN 291
>USH2A_HUMAN (O75445) Usherin precursor (Usher syndrome type-2A protein) (Usher| syndrome type IIa protein) Length = 5202 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = +2 Query: 233 TVTRVQPRARLQ-RTSGCSSQGCFHSLPQGRHSIACRTQSGQPPRGSAPSRTPSH 394 T+ + P A+ C+S GC HSLP + Q PP+ S T H Sbjct: 1206 TIWNLVPFAKYDFSVQACTSGGCLHSLPITVTTAQAPPQRLSPPKMQKISSTELH 1260
>TGT_XYLFT (Q87EW6) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 377 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = -1 Query: 364 PRWLTGLGSTSDTVTSLG*AMETTLTATTRGPLKTGSRLDSRHSENGQ*HQGFFNTKDSN 185 PR+L G+G D V S+ RG + +RH+ NGQ GF K N Sbjct: 243 PRYLMGVGRPEDLVESVA-----------RGVDMFDCVMPTRHARNGQYFTGFGTVKIRN 291
>CP17A_BOVIN (P05185) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 509 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 11/69 (15%) Frame = +2 Query: 110 INNPIQFKITIKILFIC--------DHTYTCVDVTVLGVKEPL---VLLSVFTVTRVQPR 256 ++ P+ +T I FIC D + G+ E L VLL +F V ++ P Sbjct: 167 LSEPLSLAVTNIISFICFNFSFKNEDPALKAIQNVNDGILEVLSKEVLLDIFPVLKIFPS 226 Query: 257 ARLQRTSGC 283 +++ GC Sbjct: 227 KAMEKMKGC 235
>CNTN3_RAT (Q62682) Contactin-3 precursor (Brain-derived immunoglobulin| superfamily protein 1) (BIG-1) Length = 1028 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Frame = +2 Query: 47 FKWICTEYTS------RLFICDHVTHMINNPIQFKITIKILFICDHTYTCVDVTVLGVKE 208 + W+ EY S R F+ H+ ++ + C T T + VLG Sbjct: 155 YAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN--YTCVVTSTVTNARVLGSPT 212 Query: 209 PLVLLSVFTVTRVQPRARLQ 268 PLVL S + +P+ LQ Sbjct: 213 PLVLRSDGVMGEYEPKIELQ 232
>FLIF_BUCBP (Q89B00) Flagellar M-ring protein| Length = 555 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -2 Query: 153 NNIFIVILNCMGLFIICVTWSQINNLEV 70 NN+F L C+G+ I+C+ ++N L++ Sbjct: 470 NNLFEFFLICLGVIILCLLIIKLNFLKI 497 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,628,678 Number of Sequences: 219361 Number of extensions: 1239713 Number of successful extensions: 3235 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 3139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3232 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
