>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box|
           protein 8) (RNA helicase HRH1)
          Length = 1220

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +3

Query: 93  QYNTDAPIFPIPGRFPPAIDVYTDGP 170
           QY  +APIF IPGR  P   +YT  P
Sbjct: 727 QYFYEAPIFTIPGRTYPVEILYTKEP 752

>ATG3_EMENI (Q5AVG2) Autophagy-related protein 3 (Autophagy-related E2-like|
           conjugation enzyme atg3)
          Length = 787

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 27  KQKNLPPAPFKIIPPEWSLFIIQYNTDAP 113
           K +++P +PF ++PPE  L I  Y  D P
Sbjct: 517 KLQSMPESPFLLLPPELRLQIYSYVLDIP 545

>Y4GI_RHISN (P55465) Hypothetical protein y4gI|
          Length = 909

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 148 IAGGKRPGIGKMGASVLYCMINKDHSGGII-LNGAGGRFFCLLP 20
           +A  +RPG+G +GA + Y      H+G +I L G  G    L P
Sbjct: 730 VALAQRPGVGCVGAKLYYPDGRIQHAGVVIGLGGVAGHGHLLYP 773

>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase mog-5 (EC 3.6.1.-) (Sex determination protein
           mog-5) (Masculinization of germ line protein 5)
          Length = 1200

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 93  QYNTDAPIFPIPGRFPPAIDVYTDGP 170
           +Y  +APIF IPGR  P   +YT  P
Sbjct: 702 EYFLEAPIFTIPGRTFPVEILYTREP 727


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,581,054
Number of Sequences: 219361
Number of extensions: 498590
Number of successful extensions: 1072
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 80,573,946
effective HSP length: 34
effective length of database: 73,115,672
effective search space used: 1754776128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)