>FURIN_BOVIN (Q28193) Furin precursor (EC 3.4.21.75) (Paired basic amino acid|
           residue-cleaving enzyme) (PACE) (Dibasic-processing
           enzyme) (Trans Golgi network protease furin)
          Length = 797

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 180 CSRQHKTSHDANQQRPPAPESP 245
           CSRQ ++S +++QQ+PP P  P
Sbjct: 675 CSRQSQSSRESHQQQPPPPPRP 696

>MRAW_SHEVI (Q9F1N8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 313

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 94  IQQVPIHGKAWPYKTRGVHKNTAHAHRAYAVDNIK 198
           I +  I   AW +KT G  KN+ H  R  A D  K
Sbjct: 141 IARTEIEDMAWVFKTYGEEKNSRHIARCIAADRDK 175

>MRAW_SHEON (Q8E9P0) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 313

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +1

Query: 94  IQQVPIHGKAWPYKTRGVHKNTAHAHRAYAVDNIKHHTTQTNKDPRHLKAR 246
           + +  I   AW +KT G  KN  H  R  A D  K    +T KD   L AR
Sbjct: 141 LARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRT-KDLADLIAR 190

>Y1278_HAEIN (Q57431) Putative NAD(P)H nitroreductase (EC 1.-.-.-)|
          Length = 220

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +3

Query: 69  IQCKKLGKNTTGTHTWESLALQNKRGS*KYSSRTQGICSRQHKTSH 206
           ++C +L  ++ G+  W+ L +QNK    K    + G+ ++    SH
Sbjct: 37  LECGRLSPSSVGSEPWKFLVIQNKTLREKMKPFSWGMINQLDNCSH 82

>Y105_ENCCU (Q8STH9) Hypothetical protein ECU01_0050/ECU01_1560/ECU07_0010|
          Length = 238

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +1

Query: 58  ITQVSNAKN*GKIQQVPIHGKAWPYKTRGVHKNTAHAHRAYAVDNIKHHTTQTNK 222
           +   S  K      Q P  G   P K +  H    H H A    N KH  T++ K
Sbjct: 76  VAATSRPKPGNPFLQPPTKGTPPPKKKKKNHTEGCHTHEANPEPNTKHTETESPK 130

>MATK_ABIBR (Q8MDU0) Maturase K (Intron maturase) (Fragment)|
          Length = 508

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -2

Query: 190 CRLHMPCVRELYFY---EPLLFCKARLS 116
           CR H+P  R+ YF+   EP   C  +LS
Sbjct: 295 CRYHLPIFRQFYFHLWSEPYRVCSHQLS 322

>FSHR_BOVIN (P35376) Follicle-stimulating hormone receptor precursor (FSH-R)|
           (Follitropin receptor)
          Length = 695

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 35  IQKTRQRSLPKYPMQKTREKYNRYPYMGK--PGLTKQEGFIKIQLTHTGH 178
           I +TR RSLP Y ++  ++   +  Y  K  P L K    ++  LT+  H
Sbjct: 225 ISRTRIRSLPSYGLENLKKLRAKSTYRLKKLPSLEKFVTLVEASLTYPSH 274

>REPX_BACC1 (Q74P24) Plasmid replication protein repX|
          Length = 435

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +2

Query: 77  QKTREKYNRYPYMGKPGLTKQEGFIKIQLTHTGHMQ 184
           ++T+ K N+YPY      T  + F KI++ +TG+++
Sbjct: 37  KETQIKNNKYPYRAILVNTNSQDFNKIEIKNTGNVR 72

>MATK_ABIHL (Q9MV46) Maturase K (Intron maturase)|
          Length = 509

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -2

Query: 190 CRLHMPCVRELYFY---EPLLFCKARLS 116
           CR H+P  R+ YF+   EP   C  +LS
Sbjct: 295 CRYHLPIFRQFYFHLWSEPYRVCSHQLS 322

>MATK_ABIFI (Q9MV51) Maturase K (Intron maturase)|
          Length = 509

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -2

Query: 190 CRLHMPCVRELYFY---EPLLFCKARLS 116
           CR H+P  R+ YF+   EP   C  +LS
Sbjct: 295 CRYHLPIFRQFYFHLWSEPYRVCSHQLS 322

>Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/ECU08_2120|
          Length = 207

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +1

Query: 58  ITQVSNAKN*GKIQQVPIHGKAWPYKTRGVHKNTAHAHRAYAVDNIKHHTTQTNK 222
           +   S  K      Q P  G   P K +  H    H H A    N KH  T++ K
Sbjct: 45  VAATSRPKPGNPFLQPPTKGTPPPKKKKKNHTEGCHTHEANPEPNTKHTETESPK 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,232,806
Number of Sequences: 219361
Number of extensions: 815601
Number of successful extensions: 2629
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2629
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)