Clone Information

BLAST Search Result

Clone Name	rbaet44a11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic is...	41	8e-04
2	ALF_CICAR (O65735) Fructose-bisphosphate aldolase, cytoplasmic i...	37	0.009
3	ALF2_PEA (P46257) Fructose-bisphosphate aldolase, cytoplasmic is...	35	0.047
4	CYB_EULMM (O99797) Cytochrome b	31	0.88
5	ALF_SPIOL (P29356) Fructose-bisphosphate aldolase, cytoplasmic i...	30	1.1
6	MELK_HUMAN (Q14680) Maternal embryonic leucine zipper kinase (EC...	29	3.3
7	CP51_ISSOR (Q02315) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (...	29	3.3
8	MELK_MOUSE (Q61846) Maternal embryonic leucine zipper kinase (EC...	29	3.3
9	ALF1_PEA (P46256) Fructose-bisphosphate aldolase, cytoplasmic is...	29	3.3
10	CYB_ZALCA (Q36266) Cytochrome b	28	4.4
11	CYB_EUMJU (Q34471) Cytochrome b	28	4.4
12	CYB_EULMF (O99798) Cytochrome b	28	4.4
13	CYB_ARCGZ (Q33688) Cytochrome b	28	4.4
14	HISZ_STAAW (P64381) ATP phosphoribosyltransferase regulatory sub...	28	4.4
15	HISZ_STAAS (Q6G5Z5) ATP phosphoribosyltransferase regulatory sub...	28	4.4
16	HISZ_STAAR (Q6GDC4) ATP phosphoribosyltransferase regulatory sub...	28	4.4
17	HISZ_STAAN (P64380) ATP phosphoribosyltransferase regulatory sub...	28	4.4
18	HISZ_STAAM (P64379) ATP phosphoribosyltransferase regulatory sub...	28	4.4
19	HISZ_STAAC (Q5HCL7) ATP phosphoribosyltransferase regulatory sub...	28	4.4
20	YEA5_YEAST (P40003) Hypothetical 31.4 kDa protein in GCN4-WBP1 i...	28	5.7
21	CYB_HYSAF (Q04910) Cytochrome b	28	5.7
22	CYB_PROSA (Q6ELU8) Cytochrome b	28	7.4
23	CYB_OMMRO (Q678S8) Cytochrome b	28	7.4
24	CYB_MIRLE (Q35019) Cytochrome b	28	7.4
25	CYB_MICMU (Q9G0S9) Cytochrome b	28	7.4
26	CYB_LOBCR (Q678S9) Cytochrome b	28	7.4
27	CYB_HALGR (P38593) Cytochrome b	28	7.4
28	CYB_GALEE (Q85PP0) Cytochrome b	28	7.4
29	CYB_EULRU (O99800) Cytochrome b	28	7.4
30	CYB_EULMO (O99799) Cytochrome b	28	7.4
31	CYB_EULFC (Q34459) Cytochrome b	28	7.4
32	CYB_EULCO (Q5VJ65) Cytochrome b	28	7.4
33	DNAK_CHLAB (Q8GH79) Chaperone protein dnaK (Heat shock protein 7...	28	7.4
34	LGT_PSEAE (Q9I6F2) Prolipoprotein diacylglyceryl transferase (EC...	28	7.4
35	GP154_HUMAN (Q6W5P4) Neuropeptide S receptor (G-protein coupled ...	28	7.4
36	CYB_PHOVI (Q00530) Cytochrome b	27	9.7
37	CYB_PHOLR (Q35505) Cytochrome b	27	9.7
38	CYB_PHOHI (Q35468) Cytochrome b	27	9.7
39	CYB_PHOGR (Q35457) Cytochrome b	27	9.7
40	CYB_PHOFA (Q35438) Cytochrome b	27	9.7
41	CYB_LEPWE (P38594) Cytochrome b	27	9.7
42	CYB_HYDLE (Q34732) Cytochrome b	27	9.7
43	CYB_DRYNI (O03713) Cytochrome b	27	9.7
44	CYB_CYSCR (Q34070) Cytochrome b	27	9.7
45	CYB_GYMRO (Q9T7Q5) Cytochrome b	27	9.7
46	RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin...	27	9.7
47	DNAK_CHLCV (Q824B2) Chaperone protein dnaK (Heat shock protein 7...	27	9.7
48	TRI4_FUSSP (Q12612) Trichodiene oxygenase (EC 1.14.-.-) (Cytochr...	27	9.7

>ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC|
           4.1.2.13) (Gravity-specific protein GSC 233)
          Length = 358

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 332 DATLGEGASESLHVKDYKY 276
           DA LGEGASESLHVKDYKY
Sbjct: 340 DAVLGEGASESLHVKDYKY 358

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>ALF_CICAR (O65735) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC|
           4.1.2.13)
          Length = 359

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -2

Query: 332 DATLGEGASESLHVKDYKY 276
           ++ LGEGASESLHVKDYKY
Sbjct: 341 NSQLGEGASESLHVKDYKY 359

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>ALF2_PEA (P46257) Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 (EC|
           4.1.2.13)
          Length = 359

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 329 ATLGEGASESLHVKDYKY 276
           + LG GASESLHVKDYKY
Sbjct: 342 SNLGAGASESLHVKDYKY 359

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>CYB_EULMM (O99797) Cytochrome b|
          Length = 379

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +TG WN  ++L FT+ +T F GY
Sbjct: 109 LTGTWNIGIILLFTVMATAFMGY 131

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>ALF_SPIOL (P29356) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC|
           4.1.2.13)
          Length = 357

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -2

Query: 320 GEGASESLHVKDYKY 276
           G  ASESLHVKDYKY
Sbjct: 343 GADASESLHVKDYKY 357

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>MELK_HUMAN (Q14680) Maternal embryonic leucine zipper kinase (EC 2.7.11.1)|
           (hMELK) (Protein kinase PK38) (hPK38)
          Length = 651

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 43  QDHGTKTCCSNLQYAAPDL-QGIHQLQKE 126
           +D+  +TCC +L YAAP+L QG   L  E
Sbjct: 161 KDYHLQTCCGSLAYAAPELIQGKSYLGSE 189

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>CP51_ISSOR (Q02315) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)|
           (Sterol 14-alpha demethylase) (Lanosterol 14-alpha
           demethylase) (P450-14DM) (Fragment)
          Length = 414

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 23  LYEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKF 154
           +Y+  N++ MEQK  A +  T+    R     K ++L+Y+ + F
Sbjct: 77  IYDCPNWKLMEQKKFAKVALTKESFIRYVPLIKDEMLKYFNANF 120

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>MELK_MOUSE (Q61846) Maternal embryonic leucine zipper kinase (EC 2.7.11.1)|
           (Protein kinase PK38) (mPK38)
          Length = 643

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 43  QDHGTKTCCSNLQYAAPDL-QGIHQLQKE 126
           +D+  +TCC +L YAAP+L QG   L  E
Sbjct: 161 KDYHLQTCCGSLAYAAPELIQGKSYLGSE 189

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>ALF1_PEA (P46256) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC|
           4.1.2.13)
          Length = 357

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -2

Query: 311 ASESLHVKDYKY 276
           ASESLHVKDYKY
Sbjct: 346 ASESLHVKDYKY 357

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>CYB_ZALCA (Q36266) Cytochrome b|
          Length = 379

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S  +T  WN  ++L FTI +T F GY
Sbjct: 106 SYTLTETWNIGIILLFTIMATAFMGY 131

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>CYB_EUMJU (Q34471) Cytochrome b|
          Length = 379

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S  +T  WN  ++L FTI +T F GY
Sbjct: 106 SYTLTETWNIGIILLFTIMATAFMGY 131

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>CYB_EULMF (O99798) Cytochrome b|
          Length = 379

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +T  WN  ++L FT+ +T F GY
Sbjct: 109 LTETWNMGIILLFTVMATAFMGY 131

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>CYB_ARCGZ (Q33688) Cytochrome b|
          Length = 379

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S  +T  WN  ++L FTI +T F GY
Sbjct: 106 SYTLTETWNIGIILLFTIMATAFMGY 131

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>HISZ_STAAW (P64381) ATP phosphoribosyltransferase regulatory subunit|
          Length = 272

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 26  YEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKFSIIKNKVRYPKDISQDS 205
           ++Q N+  ++Q      +  +H IY +  +   +LLRYY S +     KV Y   I +++
Sbjct: 39  WKQLNHEDLQQMGERNFWQHEHQIYALRNDFTDQLLRYY-SMYPTAATKVAYTGLIIRNN 97

Query: 206 ENQTMI-LVSGTPKRATATQ 262
           E    + L +  P  A   Q
Sbjct: 98  EAAVQVGLENYAPSLANVQQ 117

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>HISZ_STAAS (Q6G5Z5) ATP phosphoribosyltransferase regulatory subunit|
          Length = 272

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 26  YEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKFSIIKNKVRYPKDISQDS 205
           ++Q N+  ++Q      +  +H IY +  +   +LLRYY S +     KV Y   I +++
Sbjct: 39  WKQLNHEDLQQMGERNFWQHEHQIYALRNDFTDQLLRYY-SMYPTAATKVAYTGLIIRNN 97

Query: 206 ENQTMI-LVSGTPKRATATQ 262
           E    + L +  P  A   Q
Sbjct: 98  EAAVQVGLENYAPSLANVQQ 117

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>HISZ_STAAR (Q6GDC4) ATP phosphoribosyltransferase regulatory subunit|
          Length = 272

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 26  YEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKFSIIKNKVRYPKDISQDS 205
           ++Q N+  ++Q      +  +H IY +  +   +LLRYY S +     KV Y   I +++
Sbjct: 39  WKQLNHEDLQQMGERNFWQHEHQIYALRNDFTDQLLRYY-SMYPTAATKVAYTGLIIRNN 97

Query: 206 ENQTMI-LVSGTPKRATATQ 262
           E    + L +  P  A   Q
Sbjct: 98  EAAVQVGLENYAPSLANVQQ 117

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>HISZ_STAAN (P64380) ATP phosphoribosyltransferase regulatory subunit|
          Length = 272

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 26  YEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKFSIIKNKVRYPKDISQDS 205
           ++Q N+  ++Q      +  +H IY +  +   +LLRYY S +     KV Y   I +++
Sbjct: 39  WKQLNHEDLQQMGERNFWQHEHQIYALRNDFTDQLLRYY-SMYPTAATKVAYTGLIIRNN 97

Query: 206 ENQTMI-LVSGTPKRATATQ 262
           E    + L +  P  A   Q
Sbjct: 98  EAAVQVGLENYAPSLANVQQ 117

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>HISZ_STAAM (P64379) ATP phosphoribosyltransferase regulatory subunit|
          Length = 272

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 26  YEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKFSIIKNKVRYPKDISQDS 205
           ++Q N+  ++Q      +  +H IY +  +   +LLRYY S +     KV Y   I +++
Sbjct: 39  WKQLNHEDLQQMGERNFWQHEHQIYALRNDFTDQLLRYY-SMYPTAATKVAYTGLIIRNN 97

Query: 206 ENQTMI-LVSGTPKRATATQ 262
           E    + L +  P  A   Q
Sbjct: 98  EAAVQVGLENYAPSLANVQQ 117

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>HISZ_STAAC (Q5HCL7) ATP phosphoribosyltransferase regulatory subunit|
          Length = 272

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 26  YEQENYRTMEQKPAAPIYNTQHPIYRVFINSKKKLLRYYESKFSIIKNKVRYPKDISQDS 205
           ++Q N+  ++Q      +  +H IY +  +   +LLRYY S +     KV Y   I +++
Sbjct: 39  WKQLNHEDLQQMGERNFWQHEHQIYALRNDFTDQLLRYY-SMYPTAATKVAYTGLIIRNN 97

Query: 206 ENQTMI-LVSGTPKRATATQ 262
           E    + L +  P  A   Q
Sbjct: 98  EAAVQVGLENYAPSLANVQQ 117

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>YEA5_YEAST (P40003) Hypothetical 31.4 kDa protein in GCN4-WBP1 intergenic|
           region
          Length = 282

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 110 INSKKKLLRYYESKFSIIKNKVRYPKDISQDSENQTMILVSGTPKRATATQRRSIN 277
           IN   +LL   E K   +  ++    DI  D  N    L +  PK+A   +  SIN
Sbjct: 111 INGNDRLLANAEKKIGSLNEELACVNDIVSDIVNNLTALNANLPKKAQLLKDDSIN 166

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>CYB_HYSAF (Q04910) Cytochrome b|
          Length = 384

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  +LL FT+ +T F GY
Sbjct: 106 SYMFTETWNIGILLLFTVMATAFMGY 131

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>CYB_PROSA (Q6ELU8) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 42  TGPWNKNLLLQFTIRSTRFTGY 107
           T  WN  +LL FT+ +T F GY
Sbjct: 110 TETWNIGILLLFTVMATAFMGY 131

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>CYB_OMMRO (Q678S8) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FTI +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131

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>CYB_MIRLE (Q35019) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FTI +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131

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>CYB_MICMU (Q9G0S9) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +T  WN  ++L FT+ +T F GY
Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131

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>CYB_LOBCR (Q678S9) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FTI +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131

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>CYB_HALGR (P38593) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FTI +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTIMATAFMGY 131

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>CYB_GALEE (Q85PP0) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   +  WN  +LL FT+ +T F GY
Sbjct: 106 SHTFSETWNVGILLLFTVMATAFMGY 131

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>CYB_EULRU (O99800) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +T  WN  ++L FT+ +T F GY
Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131

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>CYB_EULMO (O99799) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +T  WN  ++L FT+ +T F GY
Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131

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>CYB_EULFC (Q34459) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +T  WN  ++L FT+ +T F GY
Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131

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>CYB_EULCO (Q5VJ65) Cytochrome b|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  ITGPWNKNLLLQFTIRSTRFTGY 107
           +T  WN  ++L FT+ +T F GY
Sbjct: 109 LTETWNIGIILLFTVMATAFMGY 131

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>DNAK_CHLAB (Q8GH79) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 659

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 324 PWRGRLREPSRQGLQVLIDLRWVAVARLGVPLTSIIV 214
           P  G+   P   G QVLI ++  A A LG P+T  ++
Sbjct: 107 PIDGKQFTPEEIGAQVLIKMKETAEAYLGEPVTEAVI 143

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>LGT_PSEAE (Q9I6F2) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 266

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -3

Query: 205 RVLRYILWISNLVFNNAELAFIIP**FLFGVDEYPVNRVLRIVNWSSRFLFHGPV--IFL 32
           R+   + W++  V     L +++     + +DEY  N  L    W     FHG +  + L
Sbjct: 52  RLSDLVFWVACGVILGGRLGYVL----FYNLDEYIANPTLIFEVWKGGMSFHGGLLGVML 107

Query: 31  LIQW 20
            + W
Sbjct: 108 AVWW 111

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>GP154_HUMAN (Q6W5P4) Neuropeptide S receptor (G-protein coupled receptor 154)|
           (G-protein coupled receptor for asthma susceptibility)
           (G-protein coupled receptor PGR14)
          Length = 371

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
 Frame = -3

Query: 214 LVFRVLRYI----LWISNLVFNNAEL----AFIIP**FLFGVDEYPVNRVLRIVNWSSRF 59
           LV RV+RY+    L+ S  V  +  +    A + P  FL G  +    RVL ++ WS  F
Sbjct: 119 LVCRVVRYLQVVLLYASTYVLVSLSIDRYHAIVYPMKFLQGEKQA---RVLIVIAWSLSF 175

Query: 58  LFHGPVIFL 32
           LF  P + +
Sbjct: 176 LFSIPTLII 184

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>CYB_PHOVI (Q00530) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_PHOLR (Q35505) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_PHOHI (Q35468) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_PHOGR (Q35457) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_PHOFA (Q35438) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_LEPWE (P38594) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_HYDLE (Q34732) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_DRYNI (O03713) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYSYTETWNIGIILLFTVMATAFMGY 131

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>CYB_CYSCR (Q34070) Cytochrome b|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>CYB_GYMRO (Q9T7Q5) Cytochrome b|
          Length = 380

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SRKITGPWNKNLLLQFTIRSTRFTGY 107
           S   T  WN  ++L FT+ +T F GY
Sbjct: 106 SYTFTETWNIGIILLFTVMATAFMGY 131

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>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 166 KQGSISKGYISGL*KPNNDTGKRNAQTGHSNPT 264
           KQG +S+G + G+ +P    GK         PT
Sbjct: 258 KQGGVSRGAVPGVLRPQEAAGKVEKPVSQKEPT 290

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>DNAK_CHLCV (Q824B2) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 664

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 315 GRLREPSRQGLQVLIDLRWVAVARLGVPLTSIIV 214
           G+   P   G QVLI ++  A A LG P+T  ++
Sbjct: 110 GKQYTPEEIGAQVLIKMKETAEAYLGEPVTEAVI 143

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>TRI4_FUSSP (Q12612) Trichodiene oxygenase (EC 1.14.-.-) (Cytochrome P450 58)|
          Length = 520

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 264 RWVAVARLGVPLTSIIVWFSES*DISFGYRTLFLIMLNLLS*YRSSFFLELMNT 103
           RW+  A   +PL   I  FS+      GY   F  M   +S    ++ +EL +T
Sbjct: 430 RWIEAAEKKIPLKKYITNFSQGSRQCIGYTMAFAEMYLAMSRIARAYDVELYDT 483


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,195,980
Number of Sequences: 219361
Number of extensions: 934836
Number of successful extensions: 3465
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3465
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result