| Clone Name | rbaet43g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 155 bits (78), Expect = 1e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 189 gtcggcagattgatttgtcgactagtcgcggctcttgaaggggattgccctgatcaccac 248 ||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 962 gtcggcagactgattggctgactagtcgcggctcttgaaggggatggccctgatcaccac 903 Query: 249 cacgtggtatatggccgccagcgccgcgccgatgaacggacccacccaaaagat 302 ||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 902 cacgtggtagatggccgccagcgccgcaccgatgaacggaccaacccagaagat 849
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 145 bits (73), Expect = 9e-32 Identities = 100/109 (91%) Strand = Plus / Minus Query: 194 cagattgatttgtcgactagtcgcggctcttgaaggggattgccctgatcaccaccacgt 253 |||| ||||| ||| ||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 972 cagactgattggtccactagccgcggctcttgaaggggatcgccctgatcaccaccacgt 913 Query: 254 ggtatatggccgccagcgccgcgccgatgaacggacccacccaaaagat 302 |||| || |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 912 ggtagatcgccgccagcgccgcgccgatgaacggtcccacccagaagat 864
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 211 tagtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagc 270 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1018 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 959 Query: 271 gccgcgccgatgaacggacccaccca 296 ||||| |||||||||||||| ||||| Sbjct: 958 gccgctccgatgaacggaccaaccca 933
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 211 tagtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagc 270 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 35369413 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 35369354 Query: 271 gccgcgccgatgaacggacccaccca 296 ||||| |||||||||||||| ||||| Sbjct: 35369353 gccgctccgatgaacggaccaaccca 35369328
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 211 tagtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagc 270 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 29961 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 29902 Query: 271 gccgcgccgatgaacggacccaccca 296 ||||| |||||||||||||| ||||| Sbjct: 29901 gccgctccgatgaacggaccaaccca 29876
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full insert sequence Length = 1318 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 211 tagtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagc 270 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1017 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 958 Query: 271 gccgcgccgatgaacggacccaccca 296 ||||| |||||||||||||| ||||| Sbjct: 957 gccgctccgatgaacggaccaaccca 932
>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and complete cds Length = 5325 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 211 tagtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagc 270 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 4916 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 4857 Query: 271 gccgcgccgatgaacggacccaccca 296 ||||| |||||||||||||| ||||| Sbjct: 4856 gccgctccgatgaacggaccaaccca 4831
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds Length = 1403 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 211 tagtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagc 270 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 995 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 936 Query: 271 gccgcgccgatgaacggacccaccca 296 ||||| |||||||||||||| ||||| Sbjct: 935 gccgctccgatgaacggaccaaccca 910
>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence Length = 698 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 220 ctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccg 279 |||||||| ||||| |||||||| | |||| |||||| ||||| |||||||| |||||| Sbjct: 426 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 367 Query: 280 atgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 366 atgaaggggccgacccagaagat 344
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete cds Length = 1086 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 220 ctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccg 279 |||||||| ||||| |||||||| | |||| |||||| ||||| |||||||| |||||| Sbjct: 857 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 798 Query: 280 atgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 797 atgaaggggccgacccagaagat 775
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein Length = 1169 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 220 ctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccg 279 |||||||| ||||| |||||||| | |||| |||||| ||||| |||||||| |||||| Sbjct: 914 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 855 Query: 280 atgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 854 atgaaggggccgacccagaagat 832
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 60.0 bits (30), Expect = 4e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 221 tcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccga 280 ||||||| ||||| || ||||| |||||| |||||| ||||| |||||||| ||||||| Sbjct: 926 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 867 Query: 281 tgaacggacccacccaaaagat 302 |||| || || ||||| ||||| Sbjct: 866 tgaaggggccgacccagaagat 845
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 56.0 bits (28), Expect = 7e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| ||||| |||||||| | |||| |||||| ||||| ||||| || ||||| Sbjct: 820 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 761 Query: 279 gatgaacggacccacccaaaagat 302 |||||| || || ||||| ||||| Sbjct: 760 gatgaaggggccgacccagaagat 737
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker Length = 824 Score = 56.0 bits (28), Expect = 7e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| ||||| |||||||| | |||| |||||| ||||| ||||| || ||||| Sbjct: 258 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 317 Query: 279 gatgaacggacccacccaaaagat 302 |||||| || || ||||| ||||| Sbjct: 318 gatgaaggggccgacccagaagat 341
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker Length = 763 Score = 56.0 bits (28), Expect = 7e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| ||||| |||||||| | |||| |||||| ||||| ||||| || ||||| Sbjct: 519 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 460 Query: 279 gatgaacggacccacccaaaagat 302 |||||| || || ||||| ||||| Sbjct: 459 gatgaaggggccgacccagaagat 436
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 56.0 bits (28), Expect = 7e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| ||||| |||||||| | |||| |||||| ||||| ||||| || ||||| Sbjct: 970 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 911 Query: 279 gatgaacggacccacccaaaagat 302 |||||| || || ||||| ||||| Sbjct: 910 gatgaaggggccgacccagaagat 887
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 56.0 bits (28), Expect = 7e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| ||||| |||||||| | |||| |||||| ||||| ||||| || ||||| Sbjct: 965 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 906 Query: 279 gatgaacggacccacccaaaagat 302 |||||| || || ||||| ||||| Sbjct: 905 gatgaaggggccgacccagaagat 882
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 56.0 bits (28), Expect = 7e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| ||||| |||||||| | |||| |||||| ||||| ||||| || ||||| Sbjct: 1294 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 1235 Query: 279 gatgaacggacccacccaaaagat 302 |||||| || || ||||| ||||| Sbjct: 1234 gatgaaggggccgacccagaagat 1211
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 212 agtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcg 271 |||||||||||||||| |||| |||||||| | ||||||||||| ||||| || || | Sbjct: 946 agtcgcggctcttgaaagggagggccctgatgatgaccacgtggtagatggcggcaagag 887 Query: 272 ccgcgccgatgaacggacccacccaaaagat 302 | || |||||||| || || ||||| ||||| Sbjct: 886 cagcaccgatgaaggggccaacccagaagat 856
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 212 agtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcg 271 |||| |||||||||||||||| |||||||| | ||||||||||| ||||| || || | Sbjct: 937 agtcacggctcttgaaggggagggccctgatgatgaccacgtggtagatggcggcaagag 878 Query: 272 ccgcgccgatgaacggacccacccaaaagat 302 | || |||||||| || || ||||| ||||| Sbjct: 877 cagcaccgatgaaggggccaacccagaagat 847
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence Length = 791 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 212 agtcgcggctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcg 271 |||| |||||||||||||||| |||||||| | ||||||||||| ||||| || || | Sbjct: 370 agtcacggctcttgaaggggagggccctgatgatgaccacgtggtagatggcggcaagag 311 Query: 272 ccgcgccgatgaacggacccacccaaaagat 302 | || |||||||| || || ||||| ||||| Sbjct: 310 cagcaccgatgaaggggccaacccagaagat 280
>gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, complete cds Length = 1298 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccgat 281 ||||||||| || |||||||||||||| |||||||| | || ||||| ||||| || || Sbjct: 916 cttgaagggaatggccctgatcaccacgacgtggtacagtgctgccagtgccgctccaat 857 Query: 282 gaacggacccaccca 296 ||| || |||||||| Sbjct: 856 gaatggtcccaccca 842
>ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 840 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 781 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 780 aatgaaggggccaacccagaagat 757
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 28671 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 28612 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 28611 aatgaaggggccaacccagaagat 28588
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 28021445 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 28021386 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 28021385 aatgaaggggccaacccagaagat 28021362
>dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membrane intrinsic protein, complete cds Length = 1223 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggta 257 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 944 cttgaaagggatggccctgatcacaaccacgtggta 909
>dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membrane intrinsic protein, complete cds Length = 1260 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggta 257 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 948 cttgaaagggatggccctgatcacaaccacgtggta 913
>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full insert sequence Length = 1163 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 917 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 858 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 857 aatgaaggggccaacccagaagat 834
>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full insert sequence Length = 1164 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 918 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 859 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 858 aatgaaggggccaacccagaagat 835
>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full insert sequence Length = 1167 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 920 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 861 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 860 aatgaaggggccaacccagaagat 837
>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full insert sequence Length = 1462 Score = 48.1 bits (24), Expect = 0.016 Identities = 69/84 (82%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgcc 278 ||||||||| || ||||||||||| |||||| |||||| ||||| || || || ||||| Sbjct: 1216 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 1157 Query: 279 gatgaacggacccacccaaaagat 302 ||||| || || ||||| ||||| Sbjct: 1156 aatgaaggggccaacccagaagat 1133
>dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membrane intrinsic protein 1-1, complete cds Length = 1351 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggta 257 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 1085 cttgaaagggatggccctgatcacaaccacgtggta 1050
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin Length = 1291 Score = 46.1 bits (23), Expect = 0.064 Identities = 44/51 (86%) Strand = Plus / Minus Query: 252 gtggtatatggccgccagcgccgcgccgatgaacggacccacccaaaagat 302 |||||| ||||| |||||||| ||||||||||| || || ||||| ||||| Sbjct: 1288 gtggtagatggcggccagcgcggcgccgatgaaggggccgacccagaagat 1238
>dbj|AB091106.2| Lilium longiflorum PIP1 mRNA for plasma membrane intrinsic protein, complete cds Length = 1145 Score = 46.1 bits (23), Expect = 0.064 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gctcttgaaggggattgccctgatcac 245 ||||||||| ||||||||||||||||| Sbjct: 954 gctcttgaatgggattgccctgatcac 928
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 atggccgccagcgccgcgccga 280 |||||||||||||||||||||| Sbjct: 3057078 atggccgccagcgccgcgccga 3057099
>emb|AL359273.11| Human DNA sequence from clone RP11-376N17 on chromosome 1 Contains the gene for dnaj-like protein (LOC148418), the urate oxidase (UOX) pseudogene, a novel pseudogene and the gene for DNase II-like acid DNase (DLAD), complete sequence Length = 205034 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 aactagaaaataagctatatga 127 |||||||||||||||||||||| Sbjct: 182433 aactagaaaataagctatatga 182454
>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2 Length = 1189 Score = 44.1 bits (22), Expect = 0.25 Identities = 64/78 (82%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccgat 281 |||||| || || ||||| ||||| ||||||||||| | || || ||||| |||||||| Sbjct: 920 cttgaatggaatggcccttatcacaaccacgtggtaaagtgcggcgagcgctgcgccgat 861 Query: 282 gaacggacccacccaaaa 299 ||| || || |||||||| Sbjct: 860 gaatggtccgacccaaaa 843
>dbj|AB206098.1| Mimosa pudica pip1;1 mRNA for plasma membrane intrinsic protein 1;1, complete cds Length = 1096 Score = 44.1 bits (22), Expect = 0.25 Identities = 52/62 (83%) Strand = Plus / Minus Query: 235 gccctgatcaccaccacgtggtatatggccgccagcgccgcgccgatgaacggacccacc 294 |||||||||||||| |||||||| | || |||| ||| || |||||||| || |||||| Sbjct: 921 gccctgatcaccacgacgtggtacagtgctgccaacgctgctccgatgaatggtcccacc 862 Query: 295 ca 296 || Sbjct: 861 ca 860
>ref|NM_187081.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 cgccgcgccgatgaacggacccacccaaaagat 302 |||||||||||||||||| || ||||| ||||| Sbjct: 880 cgccgcgccgatgaacggcccaacccagaagat 848
>gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 274 gcgccgatgaacggacccacccaaaagat 302 ||||||||||| ||||||||||| ||||| Sbjct: 779 gcgccgatgaatggacccacccagaagat 751
>emb|AL591108.18| Human DNA sequence from clone RP11-11B12 on chromosome 1 Contains part of the gene for expressed in hematopoietic cells (heart, liver) (HLL), complete sequence Length = 77761 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 actagaaaataagctatatga 127 ||||||||||||||||||||| Sbjct: 62309 actagaaaataagctatatga 62329
>emb|AL136377.15| Human DNA sequence from clone RP5-830A10 on chromosome 1 Contains part of the gene for expressed in hematopoietic cells (heart, liver) (HLL), complete sequence Length = 115811 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 actagaaaataagctatatga 127 ||||||||||||||||||||| Sbjct: 22150 actagaaaataagctatatga 22170
>emb|AL137025.11| Human DNA sequence from clone RP11-106M7 on chromosome 10 Contains a novel gene, a novel gene (KIAA1600), a TAF9-like RNA polymerase II (TATA box binding protein (TBP)-associated factor, 31kDa) (TAF9L) pseudogene, a Ribosomal protein L15 (RPL15) pseudogene and three CpG islands, complete sequence Length = 189062 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 aaggagaaaatacaacaaaaa 169 ||||||||||||||||||||| Sbjct: 41842 aaggagaaaatacaacaaaaa 41862
>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene) Length = 1089 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 221 tcttgaaggggattgccctgatcaccaccacgtggta 257 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 841 tcttgaatgggatagctctgatcaccaccacatggta 805
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 cgccgcgccgatgaacggacccacccaaaagat 302 |||||||||||||||||| || ||||| ||||| Sbjct: 15306477 cgccgcgccgatgaacggcccaacccagaagat 15306445
>gb|AF326495.1|AF326495 Zea mays plasma membrane integral protein ZmPIP2-6 mRNA, complete cds Length = 1257 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 cgccgcgccgatgaacggacccacccaaaagat 302 |||||| ||||||||||| |||||||| ||||| Sbjct: 879 cgccgctccgatgaacgggcccacccagaagat 847
>gb|AF326490.1|AF326490 Zea mays plasma membrane integral protein ZmPIP1-6 mRNA, complete cds Length = 1325 Score = 42.1 bits (21), Expect = 1.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccgat 281 |||||||||||| ||||||| || ||| |||||| | ||||| |||||||| ||| Sbjct: 1074 cttgaaggggatggccctgaggacgacctggtggtacaccgccgcaagcgccgctccggc 1015 Query: 282 gaacggacccacccaaaagat 302 |||||| |||||||| ||||| Sbjct: 1014 gaacgggcccacccagaagat 994
>gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protein (pip2-5) mRNA, complete cds Length = 1207 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 274 gcgccgatgaacggacccacccaaaagat 302 ||||||||||| ||||||||||| ||||| Sbjct: 834 gcgccgatgaatggacccacccagaagat 806
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 cgccgcgccgatgaacggacccacccaaaagat 302 |||||||||||||||||| || ||||| ||||| Sbjct: 13476 cgccgcgccgatgaacggcccaacccagaagat 13444
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 cgccgcgccgatgaacggacccacccaaaagat 302 |||||||||||||||||| || ||||| ||||| Sbjct: 92490 cgccgcgccgatgaacggcccaacccagaagat 92458
>dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132K03, full insert sequence Length = 1215 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 cgccgcgccgatgaacggacccacccaaaagat 302 |||||||||||||||||| || ||||| ||||| Sbjct: 880 cgccgcgccgatgaacggcccaacccagaagat 848
>gb|AC005881.3|AC005881 citb_79_e_16, complete sequence Length = 181773 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 aaggagaaaatacaacaaaaa 169 ||||||||||||||||||||| Sbjct: 107620 aaggagaaaatacaacaaaaa 107600
>dbj|AB002147.1| Nicotiana excelsior mRNA for water channel protein, complete cds Length = 1112 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gggattgccctgatcaccacc 249 ||||||||||||||||||||| Sbjct: 887 gggattgccctgatcaccacc 867
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence Length = 190303 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaaacatacatttcaagag 147 |||||||||||||||||||| Sbjct: 170997 tgaaacatacatttcaagag 170978
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 atggccgccagcgccgcgccgatgaacg 286 |||||| ||||||| ||||||||||||| Sbjct: 1627342 atggccaccagcgcggcgccgatgaacg 1627369
>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2) genes, complete cds Length = 328473 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 gagaaaatacaacaaaaataagaa 175 |||| ||||||||||||||||||| Sbjct: 79337 gagataatacaacaaaaataagaa 79314
>gb|AC162854.7| Mus musculus chromosome 1, clone RP24-335B5, complete sequence Length = 162297 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ttcaagagcaaggagaaaat 159 |||||||||||||||||||| Sbjct: 142455 ttcaagagcaaggagaaaat 142474
>ref|XM_593491.2| PREDICTED: Bos taurus similar to SLAM family member 7 (LOC515466), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 883 agaaaatacaacaaaaataa 902
>ref|XM_429221.1| PREDICTED: Gallus gallus similar to KIAA0663 protein (LOC431668), mRNA Length = 1113 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctccatccacagtcggcaga 197 |||||||||||||||||||| Sbjct: 357 ctccatccacagtcggcaga 338
>ref|XM_879033.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 4 (LOC511769), mRNA Length = 4921 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 2576 attgccctgatcaccaccac 2595
>ref|XM_589168.2| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 1 (LOC511769), mRNA Length = 3308 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 963 attgccctgatcaccaccac 982
>ref|XM_866727.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 3 (LOC511769), mRNA Length = 5685 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3340 attgccctgatcaccaccac 3359
>gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic protein 1B-like protein mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 4.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 222 cttgaaggggattgccctgatcaccaccacgtggtatatggccgccagcgccgcgccgat 281 |||||| |||||||| ||||| || | ||||||||||| || || || || || ||||| Sbjct: 671 cttgaatgggattgctctgatgactatcacgtggtatagagcagcaagtgcagcaccgat 612 Query: 282 gaacggacccacccaaaaga 301 ||| || || |||||||||| Sbjct: 611 gaatggtccaacccaaaaga 592
>ref|XM_852346.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 10 (LOC478648), mRNA Length = 4929 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 2576 attgccctgatcaccaccac 2595
>ref|XM_852305.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 9 (LOC478648), mRNA Length = 4788 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3196 attgccctgatcaccaccac 3215
>ref|XM_852261.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 8 (LOC478648), mRNA Length = 4929 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3319 attgccctgatcaccaccac 3338
>ref|XM_852223.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 7 (LOC478648), mRNA Length = 4899 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3319 attgccctgatcaccaccac 3338
>ref|XM_852186.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 6 (LOC478648), mRNA Length = 4911 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3319 attgccctgatcaccaccac 3338
>ref|XM_852144.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 5 (LOC478648), mRNA Length = 4797 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3319 attgccctgatcaccaccac 3338
>ref|XM_535820.2| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 1 (LOC478648), mRNA Length = 5718 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 attgccctgatcaccaccac 251 |||||||||||||||||||| Sbjct: 3365 attgccctgatcaccaccac 3384
>gb|AC134894.4| Mus musculus BAC clone RP24-260P1 from chromosome 9, complete sequence Length = 136085 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 55250 agaaaatacaacaaaaataa 55231
>emb|CR628334.9| Zebrafish DNA sequence from clone CH211-175F11 in linkage group 17, complete sequence Length = 147890 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 83934 agaaaatacaacaaaaataa 83915
>gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, complete sequence Length = 202544 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 182777 agaaaatacaacaaaaataa 182796
>gb|BC012531.1| Homo sapiens asparagine-linked glycosylation 5 homolog (S. cerevisiae, dolichyl-phosphate beta-glucosyltransferase), mRNA (cDNA clone MGC:13316 IMAGE:4273297), complete cds Length = 1106 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 70 ggccgccagcgccgcgccga 51
>emb|AL731569.18| Human DNA sequence from clone RP11-77P6 on chromosome 10 Contains the 5' end of the gene for friend of EBNA2 (FOE) (KIAA0261) and two CpG islands, complete sequence Length = 133348 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tacaacaaaaataagaagac 178 |||||||||||||||||||| Sbjct: 4437 tacaacaaaaataagaagac 4456
>ref|NM_013338.3| Homo sapiens asparagine-linked glycosylation 5 homolog (S. cerevisiae, dolichyl-phosphate beta-glucosyltransferase) (ALG5), mRNA Length = 1145 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 91 ggccgccagcgccgcgccga 72
>ref|XM_501454.1| Yarrowia lipolytica CLIB122, YALI0C04818g predicted mRNA Length = 1755 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gattgccctgatcaccacca 250 |||||||||||||||||||| Sbjct: 1587 gattgccctgatcaccacca 1606
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 cgccagcgccgcgccgatga 283 |||||||||||||||||||| Sbjct: 4160264 cgccagcgccgcgccgatga 4160245
>emb|AL354893.14| Human DNA sequence from clone RP11-80I15 on chromosome 9 Contains an RPS26 (ribosomal protein S26) pseudogene, the 3' end of the FANCC gene for Fanconi anemia complementation group C, the 3' end of gene FLJ14675, a novel gene and a CpG island, complete sequence Length = 103980 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 aaaatacaacaaaaataagaagac 178 |||||||||||||||||| ||||| Sbjct: 5336 aaaatacaacaaaaataacaagac 5359
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gccgccagcgccgcgccgat 281 |||||||||||||||||||| Sbjct: 2953570 gccgccagcgccgcgccgat 2953589
>emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chromosome 10p14-15.3, complete sequence Length = 172657 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 caaggagaaaatacaacaaa 167 |||||||||||||||||||| Sbjct: 171167 caaggagaaaatacaacaaa 171148
>emb|AL138706.9| Human DNA sequence from clone RP11-421P11 on chromosome 13 Contains the MADH9 gene for MAD (mothers against decapentaplegic homolog 9 (Drosophila), the gene for dolichyl-phosphate beta-glucosyltransferase (ALG5), the gene for Opa-interacting protein 2 (OIP2), the 3' end of the gene for transcription factor (p38 interacting protein) (P38IP)part of as novel gene, a RPL29 pseudogene, a MAP2K1IP1 pseudogene and a CpG island, complete sequence Length = 195032 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 156294 ggccgccagcgccgcgccga 156313
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 atggccgccagcgccgcgcc 278 |||||||||||||||||||| Sbjct: 310615 atggccgccagcgccgcgcc 310596
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 atggccgccagcgccgcgcc 278 |||||||||||||||||||| Sbjct: 256064 atggccgccagcgccgcgcc 256045
>emb|BX571863.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 5/17 Length = 349318 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 atccacagtcggcagattga 201 |||||||||||||||||||| Sbjct: 246404 atccacagtcggcagattga 246385
>emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in linkage group 1, complete sequence Length = 177606 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 aaatacaacaaaaataagaa 175 |||||||||||||||||||| Sbjct: 22873 aaatacaacaaaaataagaa 22854
>ref|NM_001038191.1| Bos taurus RIB43A domain with coiled-coils 2 (RIBC2), mRNA Length = 1436 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 131 agaaaatacaacaaaaataa 112
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 4296064 ggccgccagcgccgcgccga 4296083 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gccgccagcgccgcgccgat 281 |||||||||||||||||||| Sbjct: 4187443 gccgccagcgccgcgccgat 4187462
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 863174 ggccgccagcgccgcgccga 863193
>emb|BX897687.7| Zebrafish DNA sequence from clone DKEY-151O8, complete sequence Length = 208227 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaatacaacaaaaataagaa 175 |||||||||||||||||||| Sbjct: 28397 aaatacaacaaaaataagaa 28416
>gb|AC101937.8| Mus musculus chromosome 1, clone RP24-87K13, complete sequence Length = 195175 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aggagaaaatacaacaaaaa 169 |||||||||||||||||||| Sbjct: 22209 aggagaaaatacaacaaaaa 22228
>gb|BC109543.1| Bos taurus cDNA clone MGC:133859 IMAGE:8048849, complete cds Length = 1436 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 131 agaaaatacaacaaaaataa 112
>gb|AF161498.1|AF161498 Homo sapiens HSPC149 mRNA, complete cds Length = 1116 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 67 ggccgccagcgccgcgccga 48
>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence Length = 197236 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 tgaaacatacatttcaagagcaag 151 ||||||||||||||||||| |||| Sbjct: 55919 tgaaacatacatttcaagaacaag 55896
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 caaacacattttacatcattttta 57 |||||| ||||||||||||||||| Sbjct: 24155088 caaacaaattttacatcattttta 24155111
>gb|AC157770.4| Mus musculus chromosome 1, clone RP24-159C20, complete sequence Length = 133072 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aggagaaaatacaacaaaaa 169 |||||||||||||||||||| Sbjct: 103527 aggagaaaatacaacaaaaa 103546
>gb|AC092593.2| Homo sapiens BAC clone RP11-68D16 from 4, complete sequence Length = 128255 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aaggagaaaatacaacaaaa 168 |||||||||||||||||||| Sbjct: 41135 aaggagaaaatacaacaaaa 41154
>gb|AY220878.1| Homo sapiens Fanconi anemia, complementation group C (FANCC) gene, complete cds Length = 221989 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 aaaatacaacaaaaataagaagac 178 |||||||||||||||||| ||||| Sbjct: 151688 aaaatacaacaaaaataacaagac 151711
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 3650152 ggccgccagcgccgcgccga 3650133
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 cgccagcgccgcgccgatga 283 |||||||||||||||||||| Sbjct: 1521793 cgccagcgccgcgccgatga 1521774
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 caaacacattttacatcattttta 57 |||||| ||||||||||||||||| Sbjct: 88546 caaacaaattttacatcattttta 88569
>gb|AC129885.3| Didelphis virginiana clone LB3-35M17, complete sequence Length = 164861 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aagctatatgatgaaacata 136 |||||||||||||||||||| Sbjct: 75512 aagctatatgatgaaacata 75531
>gb|AF102850.1|AF102850 Homo sapiens dolichyl-phosphate beta-glucosyltransferase (ALG5) mRNA, complete cds Length = 1245 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgccagcgccgcgccga 280 |||||||||||||||||||| Sbjct: 126 ggccgccagcgccgcgccga 107
>gb|AC091272.12| Mus musculus chromosome 1, clone RP23-74B7, complete sequence Length = 252476 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ttcaagagcaaggagaaaat 159 |||||||||||||||||||| Sbjct: 48387 ttcaagagcaaggagaaaat 48406
>dbj|AK115396.1| Ciona intestinalis cDNA, clone:cieg049m22, full insert sequence Length = 2705 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 2398 agaaaatacaacaaaaataa 2379
>emb|BX005010.24| Zebrafish DNA sequence from clone DKEY-8F16 in linkage group 17, complete sequence Length = 236557 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 agaaaatacaacaaaaataa 172 |||||||||||||||||||| Sbjct: 62154 agaaaatacaacaaaaataa 62173
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gattgccctgatcaccacca 250 |||||||||||||||||||| Sbjct: 631785 gattgccctgatcaccacca 631766
>gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from clone y414a Length = 40121 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gccgccagcgccgcgccgat 281 |||||||||||||||||||| Sbjct: 32614 gccgccagcgccgcgccgat 32633
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aagctatatgatgaaacata 136 |||||||||||||||||||| Sbjct: 702791 aagctatatgatgaaacata 702810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,614,293 Number of Sequences: 3902068 Number of extensions: 3614293 Number of successful extensions: 84910 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84197 Number of HSP's gapped (non-prelim): 714 length of query: 302 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 280 effective length of database: 17,147,199,772 effective search space: 4801215936160 effective search space used: 4801215936160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)