>gb|BT009618.1| Triticum aestivum clone wre1n.pk0122.d3:fis, full insert mRNA
            sequence
          Length = 1074

 Score =  408 bits (206), Expect = e-111
 Identities = 353/395 (89%), Gaps = 9/395 (2%)
 Strand = Plus / Minus

                                                                        
Query: 36   cagatggtacaacaactaaaggaatactgttcgtagaacaacaatacagtgggcaaaggt 95
            |||||||||||||||||||   ||||||||| |||||||||||||||||||||||||| |
Sbjct: 1006 cagatggtacaacaactaatccaatactgtttgtagaacaacaatacagtgggcaaagct 947

                                                                        
Query: 96   tcaagaacagaaaaatgccattacaactgggcacattattagaaaa-tgtgtgtccgagc 154
             |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||
Sbjct: 946  -caagaacagaaaaatgccattacaactgggcacattattacaaaaatgcgtgtccgagc 888

                                                                        
Query: 155  cttgtcaaaatgggtgtagtacacagagatatccatgttggccagatgagcagcttaccc 214
            | ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 887  catgtcaaaatgg-tgtagtacacaaagatatccatgttggccagatgaacagcttaccc 829

                                                                        
Query: 215  aggaatgttgcccctcaaatacgaagacaattcagagggggtcgcttttagtcgagcttt 274
            |  |||||||||||| | |||| ||| || ||||||| |||||||||||| | |||||||
Sbjct: 828  aaaaatgttgcccctaagataccaaggcagttcagagtgggtcgcttttacttgagcttt 769

                                                                        
Query: 275  cagttccataa-tggcactgtgggatggaatgtccctatgtgccgtattgtgggttttgc 333
            |||| || ||| |||||||||  | |||||||||||||  | ||| ||||||||||||||
Sbjct: 768  cagtcccgtaattggcactgtaaggtggaatgtcccta--taccgcattgtgggttttgc 711

                                                                        
Query: 334  tggcatcaaacatgtatgtacagtcaaac---tgatggtctttttagcttccgactgacg 390
            |||||||||||||||||||||||||||||   || ||||||||||||||||| |||||||
Sbjct: 710  tggcatcaaacatgtatgtacagtcaaactggtggtggtctttttagcttcccactgacg 651

                                               
Query: 391  gatagaggggaattactgacatgggacaatctgtc 425
            ||| ||||||||||||||||   ||||||||||||
Sbjct: 650  gatggaggggaattactgactgaggacaatctgtc 616

>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 100     gaacagaaaaatgccattacaa 121
               ||||||||||||||||||||||
Sbjct: 1023891 gaacagaaaaatgccattacaa 1023870

>emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 in linkage group 10,
              complete sequence
          Length = 184574

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 126    gcacattattagaaaatgtgtg 147
              ||||||||||||||||||||||
Sbjct: 143422 gcacattattagaaaatgtgtg 143443

>gb|AC151331.2| Xenopus tropicalis clone ISB-302M5, complete sequence
          Length = 85788

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 403   ttactgacatgggacaatctg 423
             |||||||||||||||||||||
Sbjct: 10274 ttactgacatgggacaatctg 10294

>gb|AC036111.7| Homo sapiens chromosome 2, clone RP11-738O11, complete sequence
          Length = 184570

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   agtcaaactgatggtcttttt 375
             |||||||||||||||||||||
Sbjct: 16796 agtcaaactgatggtcttttt 16776

>emb|BX649621.5| Mouse DNA sequence from clone RP23-173F3 on chromosome X, complete
            sequence
          Length = 195039

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 90   aaaggttcaagaacagaaaaa 110
            |||||||||||||||||||||
Sbjct: 6175 aaaggttcaagaacagaaaaa 6195

>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197962

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    acattattagaaaatgtgtg 147
              ||||||||||||||||||||
Sbjct: 148829 acattattagaaaatgtgtg 148848

>ref|NM_187457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ggatagaggggaattactga 409
            ||||||||||||||||||||
Sbjct: 1760 ggatagaggggaattactga 1741

>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   acattattagaaaatgtgtg 147
             ||||||||||||||||||||
Sbjct: 11036 acattattagaaaatgtgtg 11017

>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238466

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    cattattagaaaatgtgtgt 148
              ||||||||||||||||||||
Sbjct: 218765 cattattagaaaatgtgtgt 218746

>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence
          Length = 186990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    acagaaaaatgccattacaa 121
              ||||||||||||||||||||
Sbjct: 129654 acagaaaaatgccattacaa 129635

>gb|AC138597.7| Mus musculus chromosome 1, clone RP24-340D21, complete sequence
          Length = 147164

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tacaacaactaaaggaatac 62
             ||||||||||||||||||||
Sbjct: 29757 tacaacaactaaaggaatac 29776

>gb|AC087112.2| Rattus norvegicus strain Brown Norway clone RP31-162L19, complete
             sequence
          Length = 149639

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   cattattagaaaatgtgtgt 148
             ||||||||||||||||||||
Sbjct: 50877 cattattagaaaatgtgtgt 50858

>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence
          Length = 249789

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    aagaacagaaaaatgccatt 117
             ||||||||||||||||||||
Sbjct: 35021 aagaacagaaaaatgccatt 35040

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     ggatagaggggaattactga 409
               ||||||||||||||||||||
Sbjct: 8738706 ggatagaggggaattactga 8738687

>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 224326

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    cattattagaaaatgtgtgt 148
              ||||||||||||||||||||
Sbjct: 131274 cattattagaaaatgtgtgt 131255

>gb|AC003119.1|HUAC003119 Human Chromosome 16 BAC clone CIT987SK-27D10, complete sequence
          Length = 88036

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    agaggtttgcagatggtacaacaa 50
             |||| |||||||||||||||||||
Sbjct: 29939 agagctttgcagatggtacaacaa 29962

>gb|AC116581.4| Mus musculus BAC clone RP23-295E15 from 1, complete sequence
          Length = 156332

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     tacaacaactaaaggaatac 62
              ||||||||||||||||||||
Sbjct: 151905 tacaacaactaaaggaatac 151886

>gb|AC092496.3| Bos taurus clone RP42-394P20, complete sequence
          Length = 216538

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    gggcacattattagaaaatg 143
              ||||||||||||||||||||
Sbjct: 153986 gggcacattattagaaaatg 154005

>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12
          Length = 349080

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    ttgtgggttttgctggcatc 340
              ||||||||||||||||||||
Sbjct: 172211 ttgtgggttttgctggcatc 172192

>gb|AC166247.3| Mus musculus  BAC RP23-426E9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 191393

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   acattattagaaaatgtgtg 147
             ||||||||||||||||||||
Sbjct: 55709 acattattagaaaatgtgtg 55728

>gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, complete sequence
          Length = 206022

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aagaacagaaaaatgccatt 117
              ||||||||||||||||||||
Sbjct: 135073 aagaacagaaaaatgccatt 135054

>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   ggatagaggggaattactga 409
             ||||||||||||||||||||
Sbjct: 82357 ggatagaggggaattactga 82338

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     ggatagaggggaattactga 409
               ||||||||||||||||||||
Sbjct: 8736541 ggatagaggggaattactga 8736522

>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     cattattagaaaatgtgtgt 148
               ||||||||||||||||||||
Sbjct: 1042663 cattattagaaaatgtgtgt 1042644

>dbj|AP000371.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K16N12
          Length = 58864

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   aggttcaagaacagaaaaat 111
            ||||||||||||||||||||
Sbjct: 3360 aggttcaagaacagaaaaat 3341

>dbj|AK100694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I18, full
            insert sequence
          Length = 2924

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ggatagaggggaattactga 409
            ||||||||||||||||||||
Sbjct: 2463 ggatagaggggaattactga 2444

>dbj|AK066392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065E20, full
            insert sequence
          Length = 2300

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ggatagaggggaattactga 409
            ||||||||||||||||||||
Sbjct: 1880 ggatagaggggaattactga 1861

>dbj|AP007287.1| Lotus japonicus genomic DNA, clone:LjT12M13, TM0054b, complete sequence
          Length = 77961

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   ctgatggtctttttagcttc 381
             ||||||||||||||||||||
Sbjct: 32545 ctgatggtctttttagcttc 32526


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,123,191
Number of Sequences: 3902068
Number of extensions: 4123191
Number of successful extensions: 87476
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87354
Number of HSP's gapped (non-prelim): 116
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)