| Clone Name | rbaet43c09 |
|---|---|
| Clone Library Name | barley_pub |
>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)| (ATP20a) Length = 330 Score = 32.3 bits (72), Expect = 0.29 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = -1 Query: 359 NSTETIAQVRENANRAGAWERKFERAMENMGKIGIKTKGDQQGAEIRKVCS 207 N + A V AN A + F AM N+G++G+K G+Q EIR+ CS Sbjct: 280 NDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKV-GNQ--GEIRRDCS 327
>PER41_ARATH (O23609) Peroxidase 41 precursor (EC 1.11.1.7) (Atperox P41)| Length = 326 Score = 31.6 bits (70), Expect = 0.50 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = -1 Query: 323 ANRAGAWERKFERAMENMGKIGIKTKGDQQGAEIRKVC 210 AN A+ F RAME +G++G+ KG++ G E+R+ C Sbjct: 284 ANNQTAFFEDFARAMEKLGRVGV--KGEKDG-EVRRRC 318
>PER39_ARATH (Q9SUT2) Peroxidase 39 precursor (EC 1.11.1.7) (Atperox P39)| (ATP19a) Length = 326 Score = 31.6 bits (70), Expect = 0.50 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -1 Query: 296 KFERAMENMGKIGIKTKGDQQGAEIRKVCS 207 +F +ME MG+IG+KT D EIR+ C+ Sbjct: 297 EFSNSMEKMGRIGVKTGSD---GEIRRTCA 323
>PER43_ARATH (Q9SZH2) Peroxidase 43 precursor (EC 1.11.1.7) (Atperox P43)| Length = 326 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Frame = -1 Query: 305 WERKFERAMENMGKIGIKT--KGDQQGAEIRKVCS 207 +E F +A+ MGKIG+KT KG EIR+VCS Sbjct: 294 FESDFVKAIVKMGKIGVKTGFKG-----EIRRVCS 323
>PER65_ARATH (Q9FJR1) Peroxidase 65 precursor (EC 1.11.1.7) (Atperox P65)| (ATP43) Length = 334 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -1 Query: 359 NSTETIAQVRENANRAGAWERKFERAMENMGKIGIKTKGDQQGAEIRKVC 210 NST+ + A A+ F RAME +G +G+ KGD+ G E+R+ C Sbjct: 282 NSTKPFVDLY--ATNETAFFEDFARAMEKLGTVGV--KGDKDG-EVRRRC 326
>DRI_DROME (Q24573) Protein dead ringer (Protein retained)| Length = 911 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 48 PARGHTQSFSSMKKPTMAVARRSYISSSGDSAMHGASQP---NTPHHY 182 P+ GH Q +S +P A + ++ S+MH S+P N HH+ Sbjct: 662 PSMGHQQDAASEGEPEDDYAHGEHNTTGNSSSMHDDSEPQQMNGHHHH 709
>TILS_GLOVI (Q7NNL0) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 325 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 116 LHLIVGRFGHAWSQPAKHPASLLADVSC*LWSIP 217 LHL VG H W ++ A +A V C +W +P Sbjct: 56 LHLHVGHLDHRWRPGSERDAQRVA-VLCNVWGVP 88
>FTSK_YERPE (Q8ZGC7) DNA translocase ftsK| Length = 1305 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/83 (25%), Positives = 35/83 (42%) Frame = +3 Query: 78 SMKKPTMAVARRSYISSSGDSAMHGASQPNTPHHY*PTLVVDSGAYLPDLCALLVAFGLD 257 S + ++V Y++ D+ + G S + + P L + A A + AF Sbjct: 424 SAQSSHISVGNTPYMNPGLDAQIDGLSTTSLTNK--PVLASGTVAAATAAAAFMPAFTAT 481 Query: 258 PDFSHILHCSLELPLPRPGPVRV 326 D S + + LPRP PVR+ Sbjct: 482 SDSSSQIKQGIGPELPRPNPVRI 504
>SSR4_RAT (P30937) Somatostatin receptor type 4 (SS4R)| Length = 384 Score = 27.7 bits (60), Expect = 7.2 Identities = 8/36 (22%), Positives = 20/36 (55%) Frame = +1 Query: 235 CWSPLVLIPIFPIFSIALSNFLSHAPALFAFSLTCA 342 CW P ++ + +F +L ++H + +++ +CA Sbjct: 267 CWMPFYVVQLLNLFVTSLDATVNHVSLILSYANSCA 302
>SSR4_MOUSE (P49660) Somatostatin receptor type 4 (SS4R)| Length = 384 Score = 27.7 bits (60), Expect = 7.2 Identities = 8/36 (22%), Positives = 20/36 (55%) Frame = +1 Query: 235 CWSPLVLIPIFPIFSIALSNFLSHAPALFAFSLTCA 342 CW P ++ + +F +L ++H + +++ +CA Sbjct: 267 CWMPFYVVQLLNLFVTSLDATVNHVSLILSYANSCA 302
>SLYX_PSEHT (Q3IJT8) Protein slyX homolog| Length = 71 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 60 HTQSFSSMKKPTMAVARRSYISSSGDSAMHGASQPNTPHH 179 H Q + MK+ T +A + S S S M +P PH+ Sbjct: 32 HQQLLAKMKRQTELLAEKIKESQSSSSMMSNEPEPPPPHY 71
>PER73_ARATH (Q43873) Peroxidase 73 precursor (EC 1.11.1.7) (Atperox P73)| (PRXR11) (ATP10a) Length = 329 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -1 Query: 335 VRENANRAGAWERKFERAMENMGKIGIKTKGDQQGAEIRKVC 210 V + A + A+ + F AM +G++G+KT+ + IR+ C Sbjct: 287 VNDWAKNSVAFNKAFVTAMTKLGRVGVKTR---RNGNIRRDC 325 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,168,286 Number of Sequences: 219361 Number of extensions: 937895 Number of successful extensions: 2166 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2166 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)