>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 80      tatgaaaaaaccaacaatggcagtagc 106
               |||||||||| ||||||||||||||||
Sbjct: 1869927 tatgaaaaaatcaacaatggcagtagc 1869901

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 80      tatgaaaaaaccaacaatggcagtagc 106
               |||||||||| ||||||||||||||||
Sbjct: 1833858 tatgaaaaaatcaacaatggcagtagc 1833832

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 80      tatgaaaaaaccaacaatggcagtagc 106
               |||||||||| ||||||||||||||||
Sbjct: 1854655 tatgaaaaaatcaacaatggcagtagc 1854629

>dbj|AB196998.1| Haliotis discus hannai DNA, microsatellite Hdh825
          Length = 226

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 29  acagacacacatagacacgcccgcgcgcgggcacacaca 67
           |||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 101 acagacacgcatagacacgcacgcacgcgcgcacacaca 139

>gb|U60582.1|MMU60582 Mus musculus c-jun gene, promoter region with flanking evolutionary
            conserved sequences
          Length = 3296

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 46   cgcccgcgcgcgggcacacaca 67
            ||||||||||||||||||||||
Sbjct: 2783 cgcccgcgcgcgggcacacaca 2762

>emb|AL732611.21| Mouse DNA sequence from clone RP23-135A21 on chromosome 4, complete
              sequence
          Length = 143036

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 46     cgcccgcgcgcgggcacacaca 67
              ||||||||||||||||||||||
Sbjct: 134389 cgcccgcgcgcgggcacacaca 134410

>emb|X57155.1|MMJUNCPRM Mouse c-jun gene promoter region
          Length = 873

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 46  cgcccgcgcgcgggcacacaca 67
           ||||||||||||||||||||||
Sbjct: 351 cgcccgcgcgcgggcacacaca 330

>gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, complete sequence
          Length = 213746

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 31     agacacacatagacacgcccgcgcgcgggcacacaca 67
              ||||||||||| |||||| ||| |||| |||||||||
Sbjct: 185099 agacacacatacacacgcgcgctcgcgcgcacacaca 185135

>emb|AL590293.3| Human DNA sequence from clone RP11-227B10 on chromosome Xq21.33-22.3,
             complete sequence
          Length = 67911

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    tttattaacagacacacatag 42
             |||||||||||||||||||||
Sbjct: 57192 tttattaacagacacacatag 57172

>emb|AL833788.9| Mouse DNA sequence from clone RP23-99E6 on chromosome X, complete
              sequence
          Length = 167868

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 43     acacgcccgcgcgcgggcacacaca 67
              |||||| ||||||||||||||||||
Sbjct: 112847 acacgcacgcgcgcgggcacacaca 112823

>gb|AC103874.2| Homo sapiens chromosome 15, clone RP11-907B8, complete sequence
          Length = 158897

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 31     agacacacatagacacgcccgcgcgcgggcacacaca 67
              ||||||||||| |||||| ||| |||| |||||||||
Sbjct: 149001 agacacacatacacacgcgcgctcgcgcgcacacaca 148965

>gb|AC156835.2| Mus musculus BAC clone RP23-322L4 from chromosome 9, complete sequence
          Length = 216124

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 43    acacgcccgcgcgcgggcacacaca 67
             |||||| ||||||||||||||||||
Sbjct: 89215 acacgcgcgcgcgcgggcacacaca 89239

>gb|AC019302.14| Mus musculus chromosome 8, clone RP23-428G22, complete sequence
          Length = 241836

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 43    acacgcccgcgcgcgggcacacaca 67
             ||||||||||||||| |||||||||
Sbjct: 88597 acacgcccgcgcgcgcgcacacaca 88573

>emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, complete sequence
          Length = 138341

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     acttactgtatacctttatta 28
             |||||||||||||||||||||
Sbjct: 26355 acttactgtatacctttatta 26375

>gb|AC165304.8| Mus musculus chromosome 1, clone RP23-138D5, complete sequence
          Length = 204924

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     acacagagttttagtagtat 82
              ||||||||||||||||||||
Sbjct: 196088 acacagagttttagtagtat 196107

>gb|AY657922.1| Synthetic construct Peudomonas aeruginosa clone FLH046105.01F
           PA1308 gene, partial cds
          Length = 525

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 ctgcgccttgctggtcgcct 246
           ||||||||||||||||||||
Sbjct: 420 ctgcgccttgctggtcgcct 439

>gb|BC053009.1| Mus musculus ataxin 2 binding protein 1, mRNA (cDNA clone
           IMAGE:5699153), with apparent retained intron
          Length = 2667

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  cgcgcgcgggcacacacaga 69
           ||||||||||||||||||||
Sbjct: 172 cgcgcgcgggcacacacaga 191

>gb|AC125108.3| Mus musculus BAC clone RP24-226A8 from chromosome 10, complete sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    ttaacagacacacatagaca 45
             ||||||||||||||||||||
Sbjct: 60796 ttaacagacacacatagaca 60777

>emb|Y13902.1|MMCRTM Mus musculs Crtm gene
          Length = 14459

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 36    cacatagacacgcccgcgcgcgggcacacaca 67
             ||||||||||||| |||||||| || ||||||
Sbjct: 11508 cacatagacacgcgcgcgcgcgcgcgcacaca 11539

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ctggtcgcctttggtcttga 256
               ||||||||||||||||||||
Sbjct: 2092822 ctggtcgcctttggtcttga 2092841

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 262     atttttcccatattctccat 281
               ||||||||||||||||||||
Sbjct: 2748448 atttttcccatattctccat 2748429

>gb|AE004560.1| Pseudomonas aeruginosa PAO1, section 121 of 529 of the complete
            genome
          Length = 11168

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  ctgcgccttgctggtcgcct 246
            ||||||||||||||||||||
Sbjct: 4490 ctgcgccttgctggtcgcct 4509

>emb|CR450733.7| Zebrafish DNA sequence from clone DKEYP-86E4 in linkage group 18,
              complete sequence
          Length = 208614

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     acacagagttttagtagtat 82
              ||||||||||||||||||||
Sbjct: 108264 acacagagttttagtagtat 108283

>gb|AC156270.5| Mus musculus 10 BAC RP24-289H6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163328

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     acagacacacatagacacgc 48
              ||||||||||||||||||||
Sbjct: 141786 acagacacacatagacacgc 141805

>gb|AC153509.3| Mus musculus 10 BAC RP23-60H16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 192528

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    acagacacacatagacacgc 48
             ||||||||||||||||||||
Sbjct: 22274 acagacacacatagacacgc 22293

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     atttttcccatattctccat 281
               ||||||||||||||||||||
Sbjct: 1545879 atttttcccatattctccat 1545898

>gb|U68562.1|RNU68562 Rattus norvegicus chaperonin 60 (Hsp60) and chaperonin 10 (CPN10)
            genes, nuclear genes encoding mitochondrial proteins,
            complete cds
          Length = 13894

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  tctcccacgccccggccctg 318
            ||||||||||||||||||||
Sbjct: 3824 tctcccacgccccggccctg 3805

>gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, complete sequence
          Length = 223030

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     cgcgcgcgggcacacacaga 69
              ||||||||||||||||||||
Sbjct: 139928 cgcgcgcgggcacacacaga 139909

>emb|AL607088.26| Mouse DNA sequence from clone RP23-13A13 on chromosome 4, complete
             sequence
          Length = 103925

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    cacgcccgcgcgcgggcacacaca 67
             |||||||||||||| |||||||||
Sbjct: 67440 cacgcccgcgcgcgcgcacacaca 67417

>gb|AC136316.13| Mus musculus chromosome 1, clone RP24-331K22, complete sequence
          Length = 197109

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    acacagagttttagtagtat 82
             ||||||||||||||||||||
Sbjct: 57330 acacagagttttagtagtat 57349


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,084,985
Number of Sequences: 3902068
Number of extensions: 3084985
Number of successful extensions: 70039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69933
Number of HSP's gapped (non-prelim): 106
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)