ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet43a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.12
2dbj|AK070486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.12
3dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.12
4dbj|AK058387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.12
5emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 44 0.12
6gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, comple... 44 0.12
7gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, co... 42 0.46
8gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, comp... 42 0.46
9gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, com... 40 1.8
10gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, com... 40 1.8
11gb|AC027506.12| Homo sapiens chromosome 18, clone RP11-762J3, co... 40 1.8
12gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosom... 40 1.8
13gb|AC074363.3| Homo sapiens BAC clone RP11-31F22 from 2, complet... 40 1.8
14emb|CT571251.8| Mouse DNA sequence from clone RP23-169N10 on chr... 40 1.8
15gb|CP000110.1| Synechococcus sp. CC9605, complete genome 38 7.2
16gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete... 38 7.2
17emb|BX927253.9| Zebrafish DNA sequence from clone DKEY-29J8 in l... 38 7.2
18emb|CR388042.8| Zebrafish DNA sequence from clone CH211-254C12 i... 38 7.2
19gb|AC099948.9| Mus musculus chromosome 10, clone RP23-19D21, com... 38 7.2
20emb|BX927164.19| Zebrafish DNA sequence from clone DKEY-27P2 in ... 38 7.2
21gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosom... 38 7.2
22gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, compl... 38 7.2
23gb|AC002461.2| Homo sapiens BAC clone CTA-204I16 from 7, complet... 38 7.2
24gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, co... 38 7.2
25emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 i... 38 7.2
26emb|AL512363.11| Human DNA sequence from clone RP11-524H19 on ch... 38 7.2
27gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome... 38 7.2
28emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 i... 38 7.2
29emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chr... 38 7.2
30gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 7.2
31emb|BX649493.8| Zebrafish DNA sequence from clone CH211-226H23 i... 38 7.2
32gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell... 38 7.2
33emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in ... 38 7.2
34ref|NM_176184.2| Drosophila melanogaster Dystroglycan CG18250-RC... 38 7.2
35ref|NM_166138.3| Drosophila melanogaster Dystroglycan CG18250-RB... 38 7.2
36gb|AC018452.11| Homo sapiens chromosome 3 BAC RP11-23D24 (Roswel... 38 7.2
37gb|AC116660.1| Drosophila melanogaster X BAC RP98-27C7 (Roswell ... 38 7.2
38ref|NM_079032.2| Drosophila melanogaster Dystroglycan CG18250-RA... 38 7.2
39gb|AY069076.1| Drosophila melanogaster GH09323 full length cDNA 38 7.2
40dbj|AK165052.1| Mus musculus 2 days pregnant adult female oviduc... 38 7.2
41emb|BX571776.5| Zebrafish DNA sequence from clone CH211-139K15 i... 38 7.2
42gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33... 38 7.2
43emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 ... 38 7.2
44emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in... 38 7.2
45emb|BX649518.6| Zebrafish DNA sequence from clone CH211-162I8 in... 38 7.2
46emb|BX901920.9| Zebrafish DNA sequence from clone CH211-184M19 i... 38 7.2
47emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in ... 38 7.2
48gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43... 38 7.2
49gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42... 38 7.2
50gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 ... 38 7.2
51gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Can... 38 7.2
52emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 i... 38 7.2
53emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chro... 38 7.2
54gb|AC004248.1|AC004248 Drosophila melanogaster (P1 DS03910 (D165... 38 7.2
55gb|AC140785.4| Mus musculus BAC clone RP24-137J7 from 10, comple... 38 7.2
56gb|AC132438.3| Mus musculus BAC clone RP23-234G15 from 3, comple... 38 7.2
57gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, compl... 38 7.2
58emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on ch... 38 7.2
59emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chro... 38 7.2
60gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 38 7.2
61gb|K01912.1|HUMRASKP Human (clone lambda-Ki-4) c-Ki-ras1 pseudog... 38 7.2 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 51/60 (85%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                            
Query: 83       caaaacgtataaaaattaccagtttctttgatcataaatacatattacggcaagaaccgg 142
                |||||||||||||   ||||||||||| ||||| || ||||||||| |  ||||||||||
Sbjct: 26374779 caaaacgtataaa---taccagtttctctgatcttagatacatattccaccaagaaccgg 26374723
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>dbj|AK070486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048A10, full
            insert sequence
          Length = 1770

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 51/60 (85%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                        
Query: 83   caaaacgtataaaaattaccagtttctttgatcataaatacatattacggcaagaaccgg 142
            |||||||||||||   ||||||||||| ||||| || ||||||||| |  ||||||||||
Sbjct: 1738 caaaacgtataaa---taccagtttctctgatcttagatacatattccaccaagaaccgg 1682
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>dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P15, full
            insert sequence
          Length = 2455

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 51/60 (85%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                        
Query: 83   caaaacgtataaaaattaccagtttctttgatcataaatacatattacggcaagaaccgg 142
            |||||||||||||   ||||||||||| ||||| || ||||||||| |  ||||||||||
Sbjct: 2356 caaaacgtataaa---taccagtttctctgatcttagatacatattccaccaagaaccgg 2300
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>dbj|AK058387.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-A01, full
            insert sequence
          Length = 1535

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 51/60 (85%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                        
Query: 83   caaaacgtataaaaattaccagtttctttgatcataaatacatattacggcaagaaccgg 142
            |||||||||||||   ||||||||||| ||||| || ||||||||| |  ||||||||||
Sbjct: 1434 caaaacgtataaa---taccagtttctctgatcttagatacatattccaccaagaaccgg 1378
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>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
             complete sequence
          Length = 171551

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 51/60 (85%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                         
Query: 83    caaaacgtataaaaattaccagtttctttgatcataaatacatattacggcaagaaccgg 142
             |||||||||||||   ||||||||||| ||||| || ||||||||| |  ||||||||||
Sbjct: 15412 caaaacgtataaa---taccagtttctctgatcttagatacatattccaccaagaaccgg 15356
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>gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, complete sequence
          Length = 202869

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 35    acgcattacatgtatgtatgta 56
             ||||||||||||||||||||||
Sbjct: 68162 acgcattacatgtatgtatgta 68183
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>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence
          Length = 262970

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   gtttctttgatcataaataca 124
             |||||||||||||||||||||
Sbjct: 12364 gtttctttgatcataaataca 12344
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>gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, complete sequence
          Length = 185061

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 104    gtttctttgatcataaataca 124
              |||||||||||||||||||||
Sbjct: 174368 gtttctttgatcataaataca 174348
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>gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, complete sequence
          Length = 160709

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    ttacatgtatgtatgtacctttac 63
             ||||||||||||||||||| ||||
Sbjct: 78912 ttacatgtatgtatgtacccttac 78935
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>gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, complete sequence
          Length = 168622

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ttacatgtatgtatgtacctttac 63
              ||||||||||||||||||| ||||
Sbjct: 102360 ttacatgtatgtatgtacccttac 102337
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>gb|AC027506.12| Homo sapiens chromosome 18, clone RP11-762J3, complete sequence
          Length = 189781

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    ataaaaattaccagtttctttgat 114
             ||||||||||||||| ||||||||
Sbjct: 42222 ataaaaattaccagtctctttgat 42199
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>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete
             sequence
          Length = 204231

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ttacatgtatgtatgtacct 59
             ||||||||||||||||||||
Sbjct: 29581 ttacatgtatgtatgtacct 29600
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>gb|AC074363.3| Homo sapiens BAC clone RP11-31F22 from 2, complete sequence
          Length = 151325

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     aaaattaccagtttctttga 113
              ||||||||||||||||||||
Sbjct: 128642 aaaattaccagtttctttga 128661
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>emb|CT571251.8| Mouse DNA sequence from clone RP23-169N10 on chromosome 14, complete
             sequence
          Length = 58749

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    acatgtatgtatgtaccttt 61
             ||||||||||||||||||||
Sbjct: 29053 acatgtatgtatgtaccttt 29072
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 130     cggcaagaaccggtaggaa 148
               |||||||||||||||||||
Sbjct: 1455202 cggcaagaaccggtaggaa 1455220
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>gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete sequence
          Length = 160827

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     atgtatgtatgtaccttta 62
              |||||||||||||||||||
Sbjct: 112270 atgtatgtatgtaccttta 112288
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>emb|BX927253.9| Zebrafish DNA sequence from clone DKEY-29J8 in linkage group 21,
             complete sequence
          Length = 204347

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 59204 tacatgtatgtatgtacct 59186
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>emb|CR388042.8| Zebrafish DNA sequence from clone CH211-254C12 in linkage group 15,
             complete sequence
          Length = 158539

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 39328 tacatgtatgtatgtacct 39310
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>gb|AC099948.9| Mus musculus chromosome 10, clone RP23-19D21, complete sequence
          Length = 203086

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    atgtatgtatgtaccttta 62
             |||||||||||||||||||
Sbjct: 33951 atgtatgtatgtaccttta 33933
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>emb|BX927164.19| Zebrafish DNA sequence from clone DKEY-27P2 in linkage group 5,
             complete sequence
          Length = 108759

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 75654 tacatgtatgtatgtacct 75636
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>gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosome 15, complete sequence
          Length = 193321

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     cattacatgtatgtatgta 56
              |||||||||||||||||||
Sbjct: 189537 cattacatgtatgtatgta 189519
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>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence
          Length = 184557

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     cattacatgtatgtatgta 56
              |||||||||||||||||||
Sbjct: 181648 cattacatgtatgtatgta 181666
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>gb|AC002461.2| Homo sapiens BAC clone CTA-204I16 from 7, complete sequence
          Length = 197273

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     atgtatgtatgtaccttta 62
              |||||||||||||||||||
Sbjct: 99983  atgtatgtatgtaccttta 100001
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>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence
          Length = 209838

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     cattacatgtatgtatgta 56
              |||||||||||||||||||
Sbjct: 178786 cattacatgtatgtatgta 178768
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>emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 in linkage group 23,
              complete sequence
          Length = 180834

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     tacatgtatgtatgtacct 59
              |||||||||||||||||||
Sbjct: 157337 tacatgtatgtatgtacct 157319
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>emb|AL512363.11| Human DNA sequence from clone RP11-524H19 on chromosome 6 Contains
           the 3' end of transforming protein P21A (K-RAS)
           (C-K-RAS) pseudogene, a novel gene, the 5' end of the
           gene for a novel protein and a CpG island, complete
           sequence
          Length = 113075

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 89  gtataaaaattaccagttt 107
           |||||||||||||||||||
Sbjct: 592 gtataaaaattaccagttt 574
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>gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome 10, complete sequence
          Length = 196465

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   tttgatcataaatacatat 127
             |||||||||||||||||||
Sbjct: 52826 tttgatcataaatacatat 52844
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>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3,
             complete sequence
          Length = 162342

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 84955 tacatgtatgtatgtacct 84973
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>emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chromosome 4 Contains the 3'
              end of a novel gene and a novel gene, complete sequence
          Length = 174731

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     catgtatgtatgtaccttt 61
              |||||||||||||||||||
Sbjct: 153437 catgtatgtatgtaccttt 153455
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 28      tcaacgaacgcattacatg 46
               |||||||||||||||||||
Sbjct: 6378684 tcaacgaacgcattacatg 6378702
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>emb|BX649493.8| Zebrafish DNA sequence from clone CH211-226H23 in linkage group 2,
              complete sequence
          Length = 175551

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     aaaaattaccagtttcttt 111
              |||||||||||||||||||
Sbjct: 145483 aaaaattaccagtttcttt 145465
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>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163764

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     atgtatgtatgtaccttta 62
              |||||||||||||||||||
Sbjct: 153405 atgtatgtatgtaccttta 153423
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>emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in linkage group 14,
             complete sequence
          Length = 148362

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 17666 tacatgtatgtatgtacct 17684
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>ref|NM_176184.2| Drosophila melanogaster Dystroglycan CG18250-RC, transcript variant C
            (Dg), mRNA
          Length = 6264

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   atgtatgtatgtaccttta 62
            |||||||||||||||||||
Sbjct: 6170 atgtatgtatgtaccttta 6152
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>ref|NM_166138.3| Drosophila melanogaster Dystroglycan CG18250-RB, transcript variant B
            (Dg), mRNA
          Length = 5469

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   atgtatgtatgtaccttta 62
            |||||||||||||||||||
Sbjct: 5375 atgtatgtatgtaccttta 5357
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>gb|AC018452.11| Homo sapiens chromosome 3 BAC RP11-23D24 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 171523

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     tacatgtatgtatgtacct 59
              |||||||||||||||||||
Sbjct: 151969 tacatgtatgtatgtacct 151951
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>gb|AC116660.1| Drosophila melanogaster X BAC RP98-27C7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 151605

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    atgtatgtatgtaccttta 62
             |||||||||||||||||||
Sbjct: 99484 atgtatgtatgtaccttta 99466
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>ref|NM_079032.2| Drosophila melanogaster Dystroglycan CG18250-RA, transcript variant A
            (Dg), mRNA
          Length = 5718

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   atgtatgtatgtaccttta 62
            |||||||||||||||||||
Sbjct: 5624 atgtatgtatgtaccttta 5606
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>gb|AY069076.1| Drosophila melanogaster GH09323 full length cDNA
          Length = 5729

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   atgtatgtatgtaccttta 62
            |||||||||||||||||||
Sbjct: 5624 atgtatgtatgtaccttta 5606
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>dbj|AK165052.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
           full-length enriched library, clone:E230016L01
           product:unclassifiable, full insert sequence
          Length = 5128

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  cattacatgtatgtatgta 56
           |||||||||||||||||||
Sbjct: 732 cattacatgtatgtatgta 714
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>emb|BX571776.5| Zebrafish DNA sequence from clone CH211-139K15 in linkage group 23,
             complete sequence
          Length = 160455

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 98    ttaccagtttctttgatcataaa 120
             |||||||||| ||||||||||||
Sbjct: 85249 ttaccagtttatttgatcataaa 85271
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>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone
              BACR37P12, complete sequence
          Length = 181103

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     attacatgtatgtatgtac 57
              |||||||||||||||||||
Sbjct: 129617 attacatgtatgtatgtac 129599
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>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4,
             complete sequence
          Length = 164976

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 46732 tacatgtatgtatgtacct 46714
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>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22,
             complete sequence
          Length = 148057

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 65671 tacatgtatgtatgtacct 65689
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>emb|BX649518.6| Zebrafish DNA sequence from clone CH211-162I8 in linkage group 4,
             complete sequence
          Length = 182631

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 54402 tacatgtatgtatgtacct 54384
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>emb|BX901920.9| Zebrafish DNA sequence from clone CH211-184M19 in linkage group 20,
             complete sequence
          Length = 119227

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    tataaaaattaccagtttc 108
             |||||||||||||||||||
Sbjct: 19032 tataaaaattaccagtttc 19050
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>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14,
             complete sequence
          Length = 157355

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 30427 tacatgtatgtatgtacct 30409
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>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete
              sequence
          Length = 265341

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     attacatgtatgtatgtac 57
              |||||||||||||||||||
Sbjct: 164386 attacatgtatgtatgtac 164368
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>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the complete
              sequence
          Length = 260367

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     atgtatgtatgtaccttta 62
              |||||||||||||||||||
Sbjct: 138525 atgtatgtatgtaccttta 138543
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>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete
             sequence
          Length = 290042

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    atgtatgtatgtaccttta 62
             |||||||||||||||||||
Sbjct: 78909 atgtatgtatgtaccttta 78927
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>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204618

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     cattacatgtatgtatgta 56
              |||||||||||||||||||
Sbjct: 175338 cattacatgtatgtatgta 175356
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>emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 in linkage group 25,
             complete sequence
          Length = 196037

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    tacatgtatgtatgtacct 59
             |||||||||||||||||||
Sbjct: 14841 tacatgtatgtatgtacct 14859
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>emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chromosome X, complete
              sequence
          Length = 223318

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     cattacatgtatgtatgta 56
              |||||||||||||||||||
Sbjct: 204944 cattacatgtatgtatgta 204962
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>gb|AC004248.1|AC004248 Drosophila melanogaster (P1 DS03910 (D165)) DNA sequence, complete
             sequence
          Length = 77409

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    atgtatgtatgtaccttta 62
             |||||||||||||||||||
Sbjct: 50241 atgtatgtatgtaccttta 50223
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>gb|AC140785.4| Mus musculus BAC clone RP24-137J7 from 10, complete sequence
          Length = 150763

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 109  tttgatcataaatacatat 127
            |||||||||||||||||||
Sbjct: 4721 tttgatcataaatacatat 4703
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>gb|AC132438.3| Mus musculus BAC clone RP23-234G15 from 3, complete sequence
          Length = 180660

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    gcattacatgtatgtatgt 55
             |||||||||||||||||||
Sbjct: 45899 gcattacatgtatgtatgt 45917
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>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence
          Length = 210784

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   tttgatcataaatacatat 127
             |||||||||||||||||||
Sbjct: 39322 tttgatcataaatacatat 39304
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>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete
             sequence
          Length = 214016

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    cattacatgtatgtatgta 56
             |||||||||||||||||||
Sbjct: 38288 cattacatgtatgtatgta 38270
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>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete
             sequence
          Length = 226637

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    cattacatgtatgtatgta 56
             |||||||||||||||||||
Sbjct: 81423 cattacatgtatgtatgta 81441
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>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH138P04, complete sequence
          Length = 137697

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 91    ataaaaattaccagtttctttgatcat 117
             |||||| ||||| ||||||||||||||
Sbjct: 71961 ataaaacttaccggtttctttgatcat 71935
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>gb|K01912.1|HUMRASKP Human (clone lambda-Ki-4) c-Ki-ras1 pseudogene, complete cds;
           region homologous to c-Ki-ras2 gene
          Length = 865

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 89  gtataaaaattaccagttt 107
           |||||||||||||||||||
Sbjct: 816 gtataaaaattaccagttt 798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,811,089
Number of Sequences: 3902068
Number of extensions: 1811089
Number of successful extensions: 326786
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 326258
Number of HSP's gapped (non-prelim): 523
length of query: 150
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 129
effective length of database: 17,151,101,840
effective search space: 2212492137360
effective search space used: 2212492137360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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