>ATG4_PODAN (Q86ZL5) Probable cysteine protease ATG4 (EC 3.4.22.-)|
           (Autophagy-related protein 4)
          Length = 500

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +2

Query: 32  GEKQKDLVHIHEALDFWAELDLNQRRHCQRIYSPSPLTTRASTQEEFILGFLLIYD*PPF 211
           G   K    +  A+   AE+    RR  QRI+ P P   R++ +  + LG   + D   +
Sbjct: 17  GTSPKIATAMEAAISAGAEVSRVGRRILQRIWDPEPTNDRSNNEPVWCLGCSYLLDTKEY 76

Query: 212 IILPTPRGSRIPA-ASLKERCPEP 280
              PT   S  PA A+L    PEP
Sbjct: 77  GTPPTLTTSTPPADATLTAIVPEP 100

>BGCN_DROME (Q9W1I2) Benign gonial cell neoplasm protein|
          Length = 1215

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = +2

Query: 14   QTFYFMGEKQKDLVHIHEALDFWAELDLNQRRHCQRIYSPSPLTTRASTQEEFILGFLLI 193
            +T Y+  +   DL+     LD W       RR C+ +   + LT   S   E   GF+  
Sbjct: 987  RTRYYFFKMYHDLLKHCSELDMW-------RRDCEPVSQYTVLTDTLSKIFESEDGFVGF 1039

Query: 194  YD*PPFIILPTPR 232
            +  PP   LPTP+
Sbjct: 1040 FKPPPITFLPTPQ 1052

>LRP6_HUMAN (O75581) Low-density lipoprotein receptor-related protein 6 precursor|
          Length = 1613

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +2

Query: 113  CQRIYSPSPLTTRASTQEEFILGFLLIYD*PPFIILPTPRGSRIPAASLKERC-PEPLDD 289
            C   Y+PS   T  +T + +     L YD  P    PTPR   + A    E C P P  +
Sbjct: 1537 CDSDYAPSRRMTSVATAKGYTSD--LNYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTE 1594

Query: 290  RGITRR*GHIQP 325
            R  +    H+ P
Sbjct: 1595 RSYSH---HLYP 1603

>SPRT_VIBVY (Q7MHK4) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 349 VTQADILASASSTPAFAVASL*GGTLPYRC 438
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>SPRT_VIBVU (Q8DCA5) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 349 VTQADILASASSTPAFAVASL*GGTLPYRC 438
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,277,882
Number of Sequences: 219361
Number of extensions: 1209098
Number of successful extensions: 2096
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)