| Clone Name | rbaet42e07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 202 bits (102), Expect = 6e-49 Identities = 141/154 (91%) Strand = Plus / Minus Query: 256 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 315 ||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1718 tccttgtccaccgccacaaaggcctgctgcgtcaggatgtagtcgaagcgaggcgcccac 1659 Query: 316 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 375 ||||| || ||||| || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1658 ttcctggatcccaggcgagccgttgtggagcagttgtccaccatgaaggcgaccccacgg 1599 Query: 376 gcgtgcatgaacgggttcagcgagtccactgact 409 ||||||||||||||||||||||||||||| |||| Sbjct: 1598 gcgtgcatgaacgggttcagcgagtccaccgact 1565 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 180 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 239 |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| ||||| Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813 Query: 240 gtcgacggtgggc 252 ||||||||||||| Sbjct: 1812 gtcgacggtgggc 1800
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 256 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 315 ||||||||||||| ||| || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1626 tccttgtccaccgccacgaaggcctgctgcgtcaggatgtagtcgaagcgaggcgcccac 1567 Query: 316 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 375 ||||| || ||||| || ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1566 ttcctggatcccaggcgagccgttgtggagcagttgtccaccatgaaggcgaccccacgg 1507 Query: 376 gcgtgcatgaacgggttcagcgagtccactgact 409 ||||||||||||||||||||||||||||| |||| Sbjct: 1506 gcgtgcatgaacgggttcagcgagtccaccgact 1473 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 180 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 239 |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| ||||| Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721 Query: 240 gtcgacggtgggc 252 ||||||||||||| Sbjct: 1720 gtcgacggtgggc 1708
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 170 bits (86), Expect = 2e-39 Identities = 143/162 (88%) Strand = Plus / Plus Query: 248 tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307 |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| | Sbjct: 143477 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 143536 Query: 308 gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367 ||||||| ||||| || ||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 143537 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 143596 Query: 368 ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409 | ||||| || |||||||| |||||||| |||||||| |||| Sbjct: 143597 ctccacgagcatgcatgaaggggttcagtgagtccacggact 143638 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 190 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400 Query: 250 ggc 252 ||| Sbjct: 143401 ggc 143403
>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full insert sequence Length = 1153 Score = 170 bits (86), Expect = 2e-39 Identities = 143/162 (88%) Strand = Plus / Minus Query: 248 tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307 |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| | Sbjct: 847 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 788 Query: 308 gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367 ||||||| ||||| || ||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 787 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 728 Query: 368 ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409 | ||||| || |||||||| |||||||| |||||||| |||| Sbjct: 727 ctccacgagcatgcatgaaggggttcagtgagtccacggact 686 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 190 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924 Query: 250 ggc 252 ||| Sbjct: 923 ggc 921
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 170 bits (86), Expect = 2e-39 Identities = 143/162 (88%) Strand = Plus / Plus Query: 248 tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307 |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| | Sbjct: 28359235 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 28359294 Query: 308 gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367 ||||||| ||||| || ||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 28359295 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 28359354 Query: 368 ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409 | ||||| || |||||||| |||||||| |||||||| |||| Sbjct: 28359355 ctccacgagcatgcatgaaggggttcagtgagtccacggact 28359396 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 190 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158 Query: 250 ggc 252 ||| Sbjct: 28359159 ggc 28359161
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 170 bits (86), Expect = 2e-39 Identities = 143/162 (88%) Strand = Plus / Minus Query: 248 tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307 |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| | Sbjct: 1659 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 1600 Query: 308 gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367 ||||||| ||||| || ||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 1599 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 1540 Query: 368 ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409 | ||||| || |||||||| |||||||| |||||||| |||| Sbjct: 1539 ctccacgagcatgcatgaaggggttcagtgagtccacggact 1498 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 190 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736 Query: 250 ggc 252 ||| Sbjct: 1735 ggc 1733
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 137 bits (69), Expect = 3e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 253 gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312 |||| |||||| || |||||||| || || ||||||| ||||||||||||||| |||||| Sbjct: 1598 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 1539 Query: 313 cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372 || ||||| || |||| |||||| || || |||||||| || |||||||||||||||||| Sbjct: 1538 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 1479 Query: 373 cgcgcgtgcatgaacgggttcagcgagtccactgact 409 || ||||||||||| |||||||| || ||||| |||| Sbjct: 1478 cgagcgtgcatgaatgggttcagggaatccacagact 1442
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 3e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 253 gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312 |||| |||||| || |||||||| || || ||||||| ||||||||||||||| |||||| Sbjct: 26388990 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 26388931 Query: 313 cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372 || ||||| || |||| |||||| || || |||||||| || |||||||||||||||||| Sbjct: 26388930 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 26388871 Query: 373 cgcgcgtgcatgaacgggttcagcgagtccactgact 409 || ||||||||||| |||||||| || ||||| |||| Sbjct: 26388870 cgagcgtgcatgaatgggttcagggaatccacagact 26388834
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 137 bits (69), Expect = 3e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 253 gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312 |||| |||||| || |||||||| || || ||||||| ||||||||||||||| |||||| Sbjct: 62855 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 62796 Query: 313 cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372 || ||||| || |||| |||||| || || |||||||| || |||||||||||||||||| Sbjct: 62795 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 62736 Query: 373 cgcgcgtgcatgaacgggttcagcgagtccactgact 409 || ||||||||||| |||||||| || ||||| |||| Sbjct: 62735 cgagcgtgcatgaatgggttcagggaatccacagact 62699
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 137 bits (69), Expect = 3e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 253 gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312 |||| |||||| || |||||||| || || ||||||| ||||||||||||||| |||||| Sbjct: 1549 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 1490 Query: 313 cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372 || ||||| || |||| |||||| || || |||||||| || |||||||||||||||||| Sbjct: 1489 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 1430 Query: 373 cgcgcgtgcatgaacgggttcagcgagtccactgact 409 || ||||||||||| |||||||| || ||||| |||| Sbjct: 1429 cgagcgtgcatgaatgggttcagggaatccacagact 1393
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 119 bits (60), Expect = 7e-24 Identities = 129/152 (84%) Strand = Plus / Minus Query: 258 cttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccactt 317 |||||| || |||||||||||||| ||||||| |||||| |||||||| || |||||||| Sbjct: 1619 cttgtcaacagtcacaaacgcctgttgggtcaagatgtaatcgaagcgtggtgcccactt 1560 Query: 318 cctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgcgc 377 ||| || |||| || || || || |||||||| || |||||||||||||| || || || Sbjct: 1559 cctagatcccaaacgagcagttgtggagcagttatcgaccatgaaggccacaccgcgagc 1500 Query: 378 gtgcatgaacgggttcagcgagtccactgact 409 |||||||||||||||| ||||||||| |||| Sbjct: 1499 atgcatgaacgggttcaacgagtccacggact 1468 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 189 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 248 |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || || Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707 Query: 249 gggc 252 |||| Sbjct: 1706 gggc 1703
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 119 bits (60), Expect = 7e-24 Identities = 129/152 (84%) Strand = Plus / Minus Query: 258 cttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccactt 317 |||||| || |||||||||||||| ||||||| |||||| |||||||| || |||||||| Sbjct: 1630 cttgtcaacagtcacaaacgcctgttgggtcaagatgtaatcgaagcgtggtgcccactt 1571 Query: 318 cctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgcgc 377 ||| || |||| || || || || |||||||| || |||||||||||||| || || || Sbjct: 1570 cctagatcccaaacgagcagttgtggagcagttatcgaccatgaaggccacaccgcgagc 1511 Query: 378 gtgcatgaacgggttcagcgagtccactgact 409 |||||||||||||||| ||||||||| |||| Sbjct: 1510 atgcatgaacgggttcaacgagtccacggact 1479 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 189 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 248 |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || || Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718 Query: 249 gggc 252 |||| Sbjct: 1717 gggc 1714
>gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds Length = 1257 Score = 113 bits (57), Expect = 5e-22 Identities = 114/133 (85%) Strand = Plus / Minus Query: 277 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 336 ||||||| |||||||||||||||||||| || |||||||| | || ||||| || || Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071 Query: 337 gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagc 396 ||||| |||||||||||||||||| |||| || || || ||||||||| ||||||||||| Sbjct: 1070 gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttcagc 1011 Query: 397 gagtccactgact 409 |||||||| |||| Sbjct: 1010 gagtccacagact 998
>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence Length = 1029 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 258 cttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccactt 317 |||||| || |||||||||||||| ||||||| |||||| |||||||| || ||||| || Sbjct: 670 cttgtcaacagtcacaaacgcctgttgggtcaagatgtaatcgaagcgtggtgcccattt 611 Query: 318 cctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgcgc 377 ||| || |||| || || || || |||||||| || |||||||||||||| || || || Sbjct: 610 cctagatcccaaacgagcagttgtggagcagttatcgaccatgaaggccacaccgcgagc 551 Query: 378 gtgcatgaacgggttcagcgagtccactgact 409 |||||||||||||||| ||||||||| |||| Sbjct: 550 atgcatgaacgggttcaacgagtccacggact 519
>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA, complete cds Length = 2087 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585 Query: 403 ac 404 || Sbjct: 1584 ac 1583
>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase (At3g58610/F14P22_200) mRNA, complete cds Length = 1776 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476 Query: 403 ac 404 || Sbjct: 1475 ac 1474
>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2028 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1645 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1586 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1585 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1526 Query: 403 ac 404 || Sbjct: 1525 ac 1524
>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1807 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476 Query: 403 ac 404 || Sbjct: 1475 ac 1474
>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase Length = 4395 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 3980 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 3921 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 3920 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 3861 Query: 403 ac 404 || Sbjct: 3860 ac 3859
>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2058 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585 Query: 403 ac 404 || Sbjct: 1584 ac 1583
>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit Length = 1966 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1619 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1560 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1559 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1500 Query: 403 ac 404 || Sbjct: 1499 ac 1498
>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1996 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522 Query: 403 ac 404 || Sbjct: 1521 ac 1520
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 67959 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 67900 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 67899 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 67840 Query: 403 ac 404 || Sbjct: 67839 ac 67838
>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds Length = 1990 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1639 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1580 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1579 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1520 Query: 403 ac 404 || Sbjct: 1519 ac 1518
>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete cds, clone: RAFL22-45-C07 Length = 1266 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 917 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 858 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 857 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 798 Query: 403 ac 404 || Sbjct: 797 ac 796
>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete cds Length = 1980 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582 Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522 Query: 403 ac 404 || Sbjct: 1521 ac 1520
>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1983 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342 ||||||||||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1656 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1597 Query: 343 gagcagttgtccaccatgaagg 364 ||||||||||| |||||||||| Sbjct: 1596 gagcagttgtcaaccatgaagg 1575
>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete sequence Length = 229125 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 acacagcagctcacaggttcaaaca 112 ||||||||||||||||||| ||||| Sbjct: 144182 acacagcagctcacaggtttaaaca 144158
>ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104 (LOC430549), partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ctgacacagcagctcacagg 104 |||||||||||||||||||| Sbjct: 279 ctgacacagcagctcacagg 298
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 accccagccgggccgtcgtcgagc 346 ||||| |||||||||||||||||| Sbjct: 24366 acccccgccgggccgtcgtcgagc 24343
>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence Length = 184959 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 acacagcagctcacaggttcaaac 111 |||||||||| ||||||||||||| Sbjct: 108353 acacagcagcacacaggttcaaac 108376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,611,659 Number of Sequences: 3902068 Number of extensions: 2611659 Number of successful extensions: 44041 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43953 Number of HSP's gapped (non-prelim): 75 length of query: 409 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 387 effective length of database: 17,147,199,772 effective search space: 6635966311764 effective search space used: 6635966311764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)