ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet42e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY103782.1| Zea mays PCO080860 mRNA sequence 202 6e-49
2gb|BT016666.1| Zea mays clone Contig499 mRNA sequence 194 2e-46
3gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 170 2e-39
4dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
6dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
7ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic... 137 3e-29
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
9dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
10dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
11gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full... 119 7e-24
12gb|AY103707.1| Zea mays PCO072121 mRNA sequence 119 7e-24
13gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomeras... 113 5e-22
14gb|BT016378.1| Zea mays clone Contig211 mRNA sequence 111 2e-21
15ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomeras... 68 2e-08
16gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase ... 68 2e-08
17gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765)... 68 2e-08
18gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoi... 68 2e-08
19emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomero... 68 2e-08
20gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoi... 68 2e-08
21emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomer... 68 2e-08
22gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoi... 68 2e-08
23emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, B... 68 2e-08
24gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, c... 68 2e-08
25dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reducto... 68 2e-08
26gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610... 68 2e-08
27emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Co... 60 6e-06
28emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in li... 42 1.4
29ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetica... 40 5.5
30emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 5.5
31gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, co... 40 5.5

>gb|AY103782.1| Zea mays PCO080860 mRNA sequence
          Length = 2117

 Score =  202 bits (102), Expect = 6e-49
 Identities = 141/154 (91%)
 Strand = Plus / Minus

                                                                        
Query: 256  tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 315
            ||||||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 1718 tccttgtccaccgccacaaaggcctgctgcgtcaggatgtagtcgaagcgaggcgcccac 1659

                                                                        
Query: 316  ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 375
            ||||| || ||||| || ||||| || ||||||||||||||||||||||| |||||||| 
Sbjct: 1658 ttcctggatcccaggcgagccgttgtggagcagttgtccaccatgaaggcgaccccacgg 1599

                                              
Query: 376  gcgtgcatgaacgggttcagcgagtccactgact 409
            ||||||||||||||||||||||||||||| ||||
Sbjct: 1598 gcgtgcatgaacgggttcagcgagtccaccgact 1565



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 180  aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 239
            |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813

                         
Query: 240  gtcgacggtgggc 252
            |||||||||||||
Sbjct: 1812 gtcgacggtgggc 1800



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>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence
          Length = 1992

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 256  tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 315
            ||||||||||||| ||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 1626 tccttgtccaccgccacgaaggcctgctgcgtcaggatgtagtcgaagcgaggcgcccac 1567

                                                                        
Query: 316  ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 375
            ||||| || ||||| || ||||| || ||||||||||||||||||||||| |||||||| 
Sbjct: 1566 ttcctggatcccaggcgagccgttgtggagcagttgtccaccatgaaggcgaccccacgg 1507

                                              
Query: 376  gcgtgcatgaacgggttcagcgagtccactgact 409
            ||||||||||||||||||||||||||||| ||||
Sbjct: 1506 gcgtgcatgaacgggttcagcgagtccaccgact 1473



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 180  aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 239
            |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721

                         
Query: 240  gtcgacggtgggc 252
            |||||||||||||
Sbjct: 1720 gtcgacggtgggc 1708



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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score =  170 bits (86), Expect = 2e-39
 Identities = 143/162 (88%)
 Strand = Plus / Plus

                                                                          
Query: 248    tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307
              |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| |
Sbjct: 143477 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 143536

                                                                          
Query: 308    gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367
              ||||||| ||||| || ||||| || |||||||| ||||||||||| |||||||||||||
Sbjct: 143537 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 143596

                                                        
Query: 368    ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409
              | ||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 143597 ctccacgagcatgcatgaaggggttcagtgagtccacggact 143638



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                          
Query: 190    gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249
              |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400

                 
Query: 250    ggc 252
              |||
Sbjct: 143401 ggc 143403



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>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full
           insert sequence
          Length = 1153

 Score =  170 bits (86), Expect = 2e-39
 Identities = 143/162 (88%)
 Strand = Plus / Minus

                                                                       
Query: 248 tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307
           |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| |
Sbjct: 847 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 788

                                                                       
Query: 308 gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367
           ||||||| ||||| || ||||| || |||||||| ||||||||||| |||||||||||||
Sbjct: 787 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 728

                                                     
Query: 368 ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409
           | ||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 727 ctccacgagcatgcatgaaggggttcagtgagtccacggact 686



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 190 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249
           |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924

              
Query: 250 ggc 252
           |||
Sbjct: 923 ggc 921



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  170 bits (86), Expect = 2e-39
 Identities = 143/162 (88%)
 Strand = Plus / Plus

                                                                            
Query: 248      tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307
                |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| |
Sbjct: 28359235 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 28359294

                                                                            
Query: 308      gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367
                ||||||| ||||| || ||||| || |||||||| ||||||||||| |||||||||||||
Sbjct: 28359295 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 28359354

                                                          
Query: 368      ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409
                | ||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 28359355 ctccacgagcatgcatgaaggggttcagtgagtccacggact 28359396



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 190      gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249
                |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158

                   
Query: 250      ggc 252
                |||
Sbjct: 28359159 ggc 28359161



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>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full
            insert sequence
          Length = 1983

 Score =  170 bits (86), Expect = 2e-39
 Identities = 143/162 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  tgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggg 307
            |||| |||||||||||||| ||||| || || |||||||||||||||||||||||||| |
Sbjct: 1659 tgggagcatccttgtccactgtcacgaatgcttgctgggtcaggatgtagtcgaagcgtg 1600

                                                                        
Query: 308  gcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggcca 367
            ||||||| ||||| || ||||| || |||||||| ||||||||||| |||||||||||||
Sbjct: 1599 gcgcccatttccttgatcccagacgagccgtcgttgagcagttgtcaaccatgaaggcca 1540

                                                      
Query: 368  ccccacgcgcgtgcatgaacgggttcagcgagtccactgact 409
            | ||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 1539 ctccacgagcatgcatgaaggggttcagtgagtccacggact 1498



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190  gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 249
            |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736

               
Query: 250  ggc 252
            |||
Sbjct: 1735 ggc 1733



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>ref|NM_192395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score =  137 bits (69), Expect = 3e-29
 Identities = 135/157 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312
            |||| |||||| || |||||||| || || ||||||| ||||||||||||||| ||||||
Sbjct: 1598 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 1539

                                                                        
Query: 313  cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372
            || ||||| || |||| |||||| || || |||||||| || ||||||||||||||||||
Sbjct: 1538 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 1479

                                                 
Query: 373  cgcgcgtgcatgaacgggttcagcgagtccactgact 409
            || ||||||||||| |||||||| || ||||| ||||
Sbjct: 1478 cgagcgtgcatgaatgggttcagggaatccacagact 1442



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  137 bits (69), Expect = 3e-29
 Identities = 135/157 (85%)
 Strand = Plus / Minus

                                                                            
Query: 253      gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312
                |||| |||||| || |||||||| || || ||||||| ||||||||||||||| ||||||
Sbjct: 26388990 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 26388931

                                                                            
Query: 313      cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372
                || ||||| || |||| |||||| || || |||||||| || ||||||||||||||||||
Sbjct: 26388930 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 26388871

                                                     
Query: 373      cgcgcgtgcatgaacgggttcagcgagtccactgact 409
                || ||||||||||| |||||||| || ||||| ||||
Sbjct: 26388870 cgagcgtgcatgaatgggttcagggaatccacagact 26388834



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>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score =  137 bits (69), Expect = 3e-29
 Identities = 135/157 (85%)
 Strand = Plus / Minus

                                                                         
Query: 253   gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312
             |||| |||||| || |||||||| || || ||||||| ||||||||||||||| ||||||
Sbjct: 62855 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 62796

                                                                         
Query: 313   cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372
             || ||||| || |||| |||||| || || |||||||| || ||||||||||||||||||
Sbjct: 62795 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 62736

                                                  
Query: 373   cgcgcgtgcatgaacgggttcagcgagtccactgact 409
             || ||||||||||| |||||||| || ||||| ||||
Sbjct: 62735 cgagcgtgcatgaatgggttcagggaatccacagact 62699



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>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full
            insert sequence
          Length = 1917

 Score =  137 bits (69), Expect = 3e-29
 Identities = 135/157 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  gcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcc 312
            |||| |||||| || |||||||| || || ||||||| ||||||||||||||| ||||||
Sbjct: 1549 gcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcgaagcgtggcgcc 1490

                                                                        
Query: 313  cacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccacccca 372
            || ||||| || |||| |||||| || || |||||||| || ||||||||||||||||||
Sbjct: 1489 catttccttgatcccaaccgggctgttgtggagcagttatcaaccatgaaggccacccca 1430

                                                 
Query: 373  cgcgcgtgcatgaacgggttcagcgagtccactgact 409
            || ||||||||||| |||||||| || ||||| ||||
Sbjct: 1429 cgagcgtgcatgaatgggttcagggaatccacagact 1393



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>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA
            sequence
          Length = 1957

 Score =  119 bits (60), Expect = 7e-24
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  cttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccactt 317
            |||||| || |||||||||||||| ||||||| |||||| |||||||| || ||||||||
Sbjct: 1619 cttgtcaacagtcacaaacgcctgttgggtcaagatgtaatcgaagcgtggtgcccactt 1560

                                                                        
Query: 318  cctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgcgc 377
            ||| || ||||  || || || || |||||||| || |||||||||||||| || || ||
Sbjct: 1559 cctagatcccaaacgagcagttgtggagcagttatcgaccatgaaggccacaccgcgagc 1500

                                            
Query: 378  gtgcatgaacgggttcagcgagtccactgact 409
             |||||||||||||||| ||||||||| ||||
Sbjct: 1499 atgcatgaacgggttcaacgagtccacggact 1468



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 248
            |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707

                
Query: 249  gggc 252
            ||||
Sbjct: 1706 gggc 1703



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>gb|AY103707.1| Zea mays PCO072121 mRNA sequence
          Length = 1985

 Score =  119 bits (60), Expect = 7e-24
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  cttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccactt 317
            |||||| || |||||||||||||| ||||||| |||||| |||||||| || ||||||||
Sbjct: 1630 cttgtcaacagtcacaaacgcctgttgggtcaagatgtaatcgaagcgtggtgcccactt 1571

                                                                        
Query: 318  cctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgcgc 377
            ||| || ||||  || || || || |||||||| || |||||||||||||| || || ||
Sbjct: 1570 cctagatcccaaacgagcagttgtggagcagttatcgaccatgaaggccacaccgcgagc 1511

                                            
Query: 378  gtgcatgaacgggttcagcgagtccactgact 409
             |||||||||||||||| ||||||||| ||||
Sbjct: 1510 atgcatgaacgggttcaacgagtccacggact 1479



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 248
            |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718

                
Query: 249  gggc 252
            ||||
Sbjct: 1717 gggc 1714



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>gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds
          Length = 1257

 Score =  113 bits (57), Expect = 5e-22
 Identities = 114/133 (85%)
 Strand = Plus / Minus

                                                                        
Query: 277  gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 336
            |||||||  |||||||||||||||||||| || |||||||| |  || ||||| || || 
Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071

                                                                        
Query: 337  gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagc 396
            ||||| |||||||||||||||||| |||| || || || ||||||||| |||||||||||
Sbjct: 1070 gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttcagc 1011

                         
Query: 397  gagtccactgact 409
            |||||||| ||||
Sbjct: 1010 gagtccacagact 998



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>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence
          Length = 1029

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 258 cttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccactt 317
           |||||| || |||||||||||||| ||||||| |||||| |||||||| || ||||| ||
Sbjct: 670 cttgtcaacagtcacaaacgcctgttgggtcaagatgtaatcgaagcgtggtgcccattt 611

                                                                       
Query: 318 cctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgcgc 377
           ||| || ||||  || || || || |||||||| || |||||||||||||| || || ||
Sbjct: 610 cctagatcccaaacgagcagttgtggagcagttatcgaccatgaaggccacaccgcgagc 551

                                           
Query: 378 gtgcatgaacgggttcagcgagtccactgact 409
            |||||||||||||||| ||||||||| ||||
Sbjct: 550 atgcatgaacgggttcaacgagtccacggact 519



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>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA,
            complete cds
          Length = 2087

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585

              
Query: 403  ac 404
            ||
Sbjct: 1584 ac 1583



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>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase
            (At3g58610/F14P22_200) mRNA, complete cds
          Length = 1776

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476

              
Query: 403  ac 404
            ||
Sbjct: 1475 ac 1474



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>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid
            reductoisomerase (At3g58610) mRNA, complete cds
          Length = 2028

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1645 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1586

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1585 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1526

              
Query: 403  ac 404
            ||
Sbjct: 1525 ac 1524



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>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 1807

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476

              
Query: 403  ac 404
            ||
Sbjct: 1475 ac 1474



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>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase
          Length = 4395

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 3980 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 3921

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 3920 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 3861

              
Query: 403  ac 404
            ||
Sbjct: 3860 ac 3859



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>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 2058

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585

              
Query: 403  ac 404
            ||
Sbjct: 1584 ac 1583



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>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit
          Length = 1966

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1619 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1560

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1559 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1500

              
Query: 403  ac 404
            ||
Sbjct: 1499 ac 1498



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>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 1996

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522

              
Query: 403  ac 404
            ||
Sbjct: 1521 ac 1520



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>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22
          Length = 94239

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                         
Query: 283   tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
             ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 67959 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 67900

                                                                         
Query: 343   gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
             ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 67899 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 67840

               
Query: 403   ac 404
             ||
Sbjct: 67839 ac 67838



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>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds
          Length = 1990

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1639 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1580

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1579 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1520

              
Query: 403  ac 404
            ||
Sbjct: 1519 ac 1518



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>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete
           cds, clone: RAFL22-45-C07
          Length = 1266

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                       
Query: 283 tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
           ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 917 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 858

                                                                       
Query: 343 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
           ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 857 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 798

             
Query: 403 ac 404
           ||
Sbjct: 797 ac 796



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>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete
            cds
          Length = 1980

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582

                                                                        
Query: 343  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 402
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522

              
Query: 403  ac 404
            ||
Sbjct: 1521 ac 1520



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>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS76ZD11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1983

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  tgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 342
            ||||||||||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1656 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1597

                                  
Query: 343  gagcagttgtccaccatgaagg 364
            ||||||||||| ||||||||||
Sbjct: 1596 gagcagttgtcaaccatgaagg 1575



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>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete
              sequence
          Length = 229125

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 88     acacagcagctcacaggttcaaaca 112
              ||||||||||||||||||| |||||
Sbjct: 144182 acacagcagctcacaggtttaaaca 144158



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>ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104
           (LOC430549), partial mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  ctgacacagcagctcacagg 104
           ||||||||||||||||||||
Sbjct: 279 ctgacacagcagctcacagg 298



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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 323   accccagccgggccgtcgtcgagc 346
             ||||| ||||||||||||||||||
Sbjct: 24366 acccccgccgggccgtcgtcgagc 24343



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>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence
          Length = 184959

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 88     acacagcagctcacaggttcaaac 111
              |||||||||| |||||||||||||
Sbjct: 108353 acacagcagcacacaggttcaaac 108376


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,611,659
Number of Sequences: 3902068
Number of extensions: 2611659
Number of successful extensions: 44041
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43953
Number of HSP's gapped (non-prelim): 75
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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