ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet41d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017925.1| Zea mays clone EL01N0519E10.c mRNA sequence 180 2e-42
2dbj|AK120101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 8e-27
3ref|NM_186092.1| Oryza sativa (japonica cultivar-group), mRNA 117 3e-23
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
5dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
6ref|NM_197738.1| Oryza sativa (japonica cultivar-group) unknown ... 46 0.090
7gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 46 0.090
8gb|AY082965.1| Hordeum vulgare CONSTANS-like protein CO9 (CO9) g... 46 0.090
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.090
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.090
11dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.090
12dbj|AK109732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.090
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.090
14gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 44 0.36
15gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.4
16ref|XM_367030.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 42 1.4
17emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 42 1.4
18gb|U61376.1| Sinorhizobium meliloti pyruvate orthophosphate diki... 42 1.4
19emb|AL390959.12| Human DNA sequence from clone RP1-44L3 on chrom... 42 1.4
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 1.4
22dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AK109630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
24gb|AC165976.2| Gallus gallus BAC clone CH261-89G17 from chromoso... 42 1.4
25ref|NM_113574.2| Arabidopsis thaliana unknown protein AT3G26630 ... 40 5.5
26ref|NM_205454.1| Gallus gallus transforming growth factor, beta ... 40 5.5
27gb|BC039087.1| Homo sapiens abhydrolase domain containing 8, mRN... 40 5.5
28gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, com... 40 5.5
29gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 5.5
30gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, com... 40 5.5
31gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete... 40 5.5
32gb|BC007895.2| Homo sapiens abhydrolase domain containing 8, mRN... 40 5.5
33ref|NM_144604.2| Homo sapiens conserved nuclear protein NHN1 (NH... 40 5.5
34ref|NM_024527.3| Homo sapiens abhydrolase domain containing 8 (A... 40 5.5
35gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, com... 40 5.5
36gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, comp... 40 5.5
37ref|XM_838547.1| Leishmania major strain Friedlin hypothetical p... 40 5.5
38ref|XM_754267.1| Ustilago maydis 521 hypothetical protein (UM032... 40 5.5
39gb|BC050463.1| Homo sapiens conserved nuclear protein NHN1, mRNA... 40 5.5
40gb|BC001584.1| Homo sapiens conserved nuclear protein NHN1, mRNA... 40 5.5
41gb|AC126365.5| Homo sapiens chromosome 17, clone RP11-283C24, co... 40 5.5
42emb|AL121832.56|HSJ908M14 Human DNA sequence from clone RP5-908M... 40 5.5
43emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence 40 5.5
44gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, c... 40 5.5
45emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.5
46emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in... 40 5.5
47gb|AC010463.6| Homo sapiens chromosome 19 clone CTD-2278I10, com... 40 5.5
48emb|CR618792.1| full-length cDNA clone CS0DL009YJ17 of B cells (... 40 5.5
49dbj|AK091849.1| Homo sapiens cDNA FLJ34530 fis, clone HLUNG2008153 40 5.5
50dbj|AK021805.1| Homo sapiens cDNA FLJ11743 fis, clone HEMBA10055... 40 5.5
51gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.5
52gb|AY099658.1| Arabidopsis thaliana unknown protein (At3g26630) ... 40 5.5
53gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Ca... 40 5.5
54gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, com... 40 5.5
55emb|BX663518.10| Zebrafish DNA sequence from clone CH211-214O7 i... 40 5.5
56dbj|AB169660.1| Macaca fascicularis brain cDNA, clone: QccE-1506... 40 5.5
57gb|S46000.1| TGF beta 3=transforming growth factor-beta 3 {5'reg... 40 5.5
58gb|AC008043.5| Drosophila melanogaster, chromosome 3R, region 94... 40 5.5
59gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 5.5
60gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 5.5
61gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.5
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
63dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
64dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
65emb|BX000349.7| Zebrafish DNA sequence from clone DKEY-63L3 in l... 40 5.5
66dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.5
67emb|X97487.1|ATORF09 A.thaliana mRNA for unknown protein, ORF09 40 5.5
68ref|XM_313608.2| Anopheles gambiae str. PEST ENSANGP00000003563 ... 40 5.5
69dbj|AK111228.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
70gb|BC020173.1| Homo sapiens abhydrolase domain containing 8, mRN... 40 5.5
71gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42... 40 5.5
72emb|X58127.1|GGTGFB3 Gallus gallus TGF-beta3 gene for transformi... 40 5.5
73dbj|AK122593.1| Homo sapiens mRNA for FLJ00419 protein 40 5.5
74gb|AC004248.1|AC004248 Drosophila melanogaster (P1 DS03910 (D165... 40 5.5
75gb|M31154.1|CHKTGFB Chicken transforming growth factor beta (TGF... 40 5.5
76dbj|AP000545.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 40 5.5 
>gb|BT017925.1| Zea mays clone EL01N0519E10.c mRNA sequence
          Length = 824

 Score =  180 bits (91), Expect = 2e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                       
Query: 178 gacttggcgaagcggccgttgatcctcaccctgccgtcggcgcgggccttgcgcgactcg 237
           ||||||||||| || || ||||||| || || |||||| |||||||||||||||||||||
Sbjct: 446 gacttggcgaaccgccccttgatccgcatccggccgtcagcgcgggccttgcgcgactcg 387

                                                                       
Query: 238 taccggatctgcttcccgaacatcctgtttttcctcttctccttgtagcgcgagatcacc 297
           |||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||||
Sbjct: 386 taccggatctgcttgccgaacctcctgttcttccgcttctccttgtagcgcgagatcacc 327

                                              
Query: 298 ttgtcccggtcagggtagaccacgtcgtagccgcc 332
            || | ||||| |||||| ||||||||||||||||
Sbjct: 326 gtgccgcggtcggggtaggccacgtcgtagccgcc 292
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>dbj|AK120101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022K23, full
            insert sequence
          Length = 1548

 Score =  129 bits (65), Expect = 8e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 171  ctagctcgacttggcgaagcggccgttgatcctcaccctgccgtcggcgcgggccttgcg 230
            |||| ||||||| |||||||| || ||||||||||  ||||| ||||| || ||||||||
Sbjct: 1225 ctagttcgacttcgcgaagcgtcccttgatcctcaatctgccatcggcacgagccttgcg 1166

                                                                        
Query: 231  cgactcgtaccggatctgcttcccgaacatcctgtttttcctcttctccttgtagcgcga 290
            ||| |||||||||||||||||  ||||  | ||||| |||||||||||||||||||||||
Sbjct: 1165 cgattcgtaccggatctgcttgtcgaatcttctgttcttcctcttctccttgtagcgcga 1106

                                     
Query: 291  gatcaccttgtcccggtcagggtag 315
             |||||| || ||| ||||||||||
Sbjct: 1105 aatcaccgtgcccctgtcagggtag 1081
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>ref|NM_186092.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1140

 Score =  117 bits (59), Expect = 3e-23
 Identities = 124/145 (85%), Gaps = 3/145 (2%)
 Strand = Plus / Minus

                                                                        
Query: 171  ctagctcgacttggcgaagcggccgttgatcctcaccctgccgtcggcgcgggccttgcg 230
            |||| ||||||| |||||||| || ||||||||||  ||||| ||||| || ||||||||
Sbjct: 1140 ctagttcgacttcgcgaagcgtcccttgatcctcaatctgccatcggcacgagccttgcg 1081

                                                                        
Query: 231  cgactcgtaccggatctgcttcccgaacatcctgtttttcctcttctccttgtagcgcga 290
            ||| |||||||||||||||||  ||||    ||||| |||||||||||||||||||||||
Sbjct: 1080 cgattcgtaccggatctgcttgtcgaa---tctgttcttcctcttctccttgtagcgcga 1024

                                     
Query: 291  gatcaccttgtcccggtcagggtag 315
             |||||| || ||| ||||||||||
Sbjct: 1023 aatcaccgtgcccctgtcagggtag 999
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                            
Query: 171      ctagctcgacttggcgaagcggccgttgatcctcaccctgccgtcggcgcgggccttgcg 230
                |||| ||||||| |||||||| || ||||||||||  ||||| ||||| || ||||||||
Sbjct: 28131623 ctagttcgacttcgcgaagcgtcccttgatcctcaatctgccatcggcacgagccttgcg 28131682

                                     
Query: 231      cgactcgtaccggatctgctt 251
                ||| |||||||||||||||||
Sbjct: 28131683 cgattcgtaccggatctgctt 28131703



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 262      ctgtttttcctcttctccttgtagcgcgagatcaccttgtcccggtcagggtag 315
                ||||| ||||||||||||||||||||||| |||||| || ||| ||||||||||
Sbjct: 28132020 ctgttcttcctcttctccttgtagcgcgaaatcaccgtgcccctgtcagggtag 28132073
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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                          
Query: 171    ctagctcgacttggcgaagcggccgttgatcctcaccctgccgtcggcgcgggccttgcg 230
              |||| ||||||| |||||||| || ||||||||||  ||||| ||||| || ||||||||
Sbjct: 114919 ctagttcgacttcgcgaagcgtcccttgatcctcaatctgccatcggcacgagccttgcg 114978

                                   
Query: 231    cgactcgtaccggatctgctt 251
              ||| |||||||||||||||||
Sbjct: 114979 cgattcgtaccggatctgctt 114999



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                    
Query: 262    ctgtttttcctcttctccttgtagcgcgagatcaccttgtcccggtcagggtag 315
              ||||| ||||||||||||||||||||||| |||||| || ||| ||||||||||
Sbjct: 115316 ctgttcttcctcttctccttgtagcgcgaaatcaccgtgcccctgtcagggtag 115369
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>ref|NM_197738.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0042H09.9), mRNA
          Length = 1150

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 222 ggccttgcgcgactcgtaccggatctgcttc 252
           ||||||||||||  |||||||||||||||||
Sbjct: 747 ggccttgcgcgaggcgtaccggatctgcttc 717
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 222   ggccttgcgcgactcgtaccggatctgcttc 252
             ||||||||||||  |||||||||||||||||
Sbjct: 59578 ggccttgcgcgaggcgtaccggatctgcttc 59548
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>gb|AY082965.1| Hordeum vulgare CONSTANS-like protein CO9 (CO9) gene, partial cds
          Length = 944

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 222 ggccttgcgcgactcgtaccggatctgcttc 252
           ||||||||| ||| |||||||||||||||||
Sbjct: 492 ggccttgcgggacgcgtaccggatctgcttc 462
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 222      ggccttgcgcgactcgtaccggatctgcttc 252
                ||||||||||||  |||||||||||||||||
Sbjct: 21550479 ggccttgcgcgaggcgtaccggatctgcttc 21550509
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 222      ggccttgcgcgactcgtaccggatctgcttcccgaacatcctgtttttcctcttctcctt 281
                ||||||||||||| |||||||||||  |||| |||||  || ||| |||| ||||||| |
Sbjct: 26459897 ggccttgcgcgacgcgtaccggatcgtcttctcgaaccgccggttcttccgcttctccct 26459956

                   
Query: 282      gta 284
                |||
Sbjct: 26459957 gta 26459959
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>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0709F06
          Length = 170964

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 222   ggccttgcgcgactcgtaccggatctgcttcccgaacatcctgtttttcctcttctcctt 281
             ||||||||||||| |||||||||||  |||| |||||  || ||| |||| ||||||| |
Sbjct: 71936 ggccttgcgcgacgcgtaccggatcgtcttctcgaaccgccggttcttccgcttctccct 71995

                
Query: 282   gta 284
             |||
Sbjct: 71996 gta 71998
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>dbj|AK109732.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C03, full
           insert sequence
          Length = 1258

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 222 ggccttgcgcgactcgtaccggatctgcttc 252
           ||||||||||||  |||||||||||||||||
Sbjct: 985 ggccttgcgcgaggcgtaccggatctgcttc 955
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 222      ggccttgcgcgactcgtaccggatctgcttc 252
                ||||||||||||  |||||||||||||||||
Sbjct: 21562142 ggccttgcgcgaggcgtaccggatctgcttc 21562172
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 315     gaccacgtcgtagccgccgacg 336
               ||||||||||||||||||||||
Sbjct: 1402749 gaccacgtcgtagccgccgacg 1402728
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 214    tcggcgcgggccttgcgcgactcgt 238
              |||||||||||||||||| ||||||
Sbjct: 983457 tcggcgcgggccttgcgccactcgt 983481
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>ref|XM_367030.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
          (MG03106.4) partial mRNA
          Length = 2652

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 75 atggcggctccgtcgccgccc 95
          |||||||||||||||||||||
Sbjct: 1  atggcggctccgtcgccgccc 21
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>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    ctccttgtagcgcgagatcac 296
              |||||||||||||||||||||
Sbjct: 157088 ctccttgtagcgcgagatcac 157068
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>gb|U61376.1| Sinorhizobium meliloti pyruvate orthophosphate dikinase (podA)
           gene, partial cds
          Length = 341

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 276 ctccttgtagcgcgagatcac 296
           |||||||||||||||||||||
Sbjct: 339 ctccttgtagcgcgagatcac 319
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>emb|AL390959.12| Human DNA sequence from clone RP1-44L3 on chromosome 6 Contains a CpG
             island, complete sequence
          Length = 105239

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 369   ctgcactgccactgccgctgc 389
             |||||||||||||||||||||
Sbjct: 50131 ctgcactgccactgccgctgc 50111
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 222     ggccttgcgcgactcgtaccggatc 246
               ||||||||||||| |||||||||||
Sbjct: 4316455 ggccttgcgcgacgcgtaccggatc 4316431
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 72      gccatggcggctccgtcgccgcccc 96
               ||||||||||||||| |||||||||
Sbjct: 3623269 gccatggcggctccgacgccgcccc 3623245
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>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0504A05
          Length = 148360

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    ggccttgcgcgactcgtaccggatc 246
              ||||||||||||| |||||||||||
Sbjct: 133269 ggccttgcgcgacgcgtaccggatc 133245
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>dbj|AK109630.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-D02, full
           insert sequence
          Length = 1370

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 222 ggccttgcgcgactcgtaccggatc 246
           ||||||||||||| |||||||||||
Sbjct: 872 ggccttgcgcgacgcgtaccggatc 848
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>gb|AC165976.2| Gallus gallus BAC clone CH261-89G17 from chromosome ul, complete
            sequence
          Length = 176724

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 258  catcctgtttttcctcttctc 278
            |||||||||||||||||||||
Sbjct: 5309 catcctgtttttcctcttctc 5289
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>ref|NM_113574.2| Arabidopsis thaliana unknown protein AT3G26630 mRNA, complete cds
          Length = 1615

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 73 ccatggcggctccgtcgccg 92
          ||||||||||||||||||||
Sbjct: 45 ccatggcggctccgtcgccg 64
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>ref|NM_205454.1| Gallus gallus transforming growth factor, beta 3 (TGFB3), mRNA
          Length = 2187

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 80  ggctccgtcgccgccccctcgcac 103
           ||||||| ||||||||||||||||
Sbjct: 16  ggctccgccgccgccccctcgcac 39
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>gb|BC039087.1| Homo sapiens abhydrolase domain containing 8, mRNA (cDNA clone
           MGC:35035 IMAGE:5165152), complete cds
          Length = 1959

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 518 cactgccactgccgctgccg 499
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>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence
          Length = 215514

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 7      cacaatgtagctcgcacagtgaca 30
              |||| |||||||||||||||||||
Sbjct: 164471 cacagtgtagctcgcacagtgaca 164448
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 382     gccgctgccggcgacgggtg 401
               ||||||||||||||||||||
Sbjct: 2082115 gccgctgccggcgacgggtg 2082134
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>gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, complete sequence
          Length = 172369

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   cactgccactgccgctgccg 391
             ||||||||||||||||||||
Sbjct: 25869 cactgccactgccgctgccg 25888
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>gb|AC099025.2| Drosophila melanogaster clone BACR04O19, complete sequence
          Length = 160827

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    tgcactgccactgccgctgc 389
              ||||||||||||||||||||
Sbjct: 123448 tgcactgccactgccgctgc 123429
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>gb|BC007895.2| Homo sapiens abhydrolase domain containing 8, mRNA (cDNA clone
           MGC:14280 IMAGE:4131888), complete cds
          Length = 2007

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 575 cactgccactgccgctgccg 556
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>ref|NM_144604.2| Homo sapiens conserved nuclear protein NHN1 (NHN1), mRNA
          Length = 3572

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 2221 cactgccactgccgctgccg 2202
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>ref|NM_024527.3| Homo sapiens abhydrolase domain containing 8 (ABHD8), mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 625 cactgccactgccgctgccg 606
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>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence
          Length = 149463

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     cacaatgtagctcgcacagtgaca 30
             |||| |||||||||||||||||||
Sbjct: 39665 cacagtgtagctcgcacagtgaca 39642
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>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence
          Length = 176797

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   cactgccactgccgctgccg 391
             ||||||||||||||||||||
Sbjct: 41347 cactgccactgccgctgccg 41366
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>ref|XM_838547.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1467)
             partial mRNA
          Length = 19875

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   gccgctgccggcgacgggtg 401
             ||||||||||||||||||||
Sbjct: 13179 gccgctgccggcgacgggtg 13198
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>ref|XM_754267.1| Ustilago maydis 521 hypothetical protein (UM03213.1) partial mRNA
          Length = 3708

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 708 cactgccactgccgctgccg 727
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>gb|BC050463.1| Homo sapiens conserved nuclear protein NHN1, mRNA (cDNA clone
            MGC:54295 IMAGE:6042036), complete cds
          Length = 3572

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 2221 cactgccactgccgctgccg 2202
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>gb|BC001584.1| Homo sapiens conserved nuclear protein NHN1, mRNA (cDNA clone
            IMAGE:3461401), partial cds
          Length = 2837

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 1370 cactgccactgccgctgccg 1351
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>gb|AC126365.5| Homo sapiens chromosome 17, clone RP11-283C24, complete sequence
          Length = 194265

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ttttcctcttctccttgtag 285
             ||||||||||||||||||||
Sbjct: 21508 ttttcctcttctccttgtag 21489
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>emb|AL121832.56|HSJ908M14 Human DNA sequence from clone RP5-908M14 on chromosome 20 Contains the
             RPS21 gene for ribosomal protein S21, the C20orf150 gene
             for a novel protein similar to Mus musculus cables,, the
             C20orf151 gene for a novel protein weakly similar to
             retinoblastoma binding protein 8 (RBBP8), a novel gene and
             four CpG islands, complete sequence
          Length = 79951

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   cactgccactgccgctgccg 391
             ||||||||||||||||||||
Sbjct: 49670 cactgccactgccgctgccg 49651



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   cactgccactgccgctgccg 391
             ||||||||||||||||||||
Sbjct: 49583 cactgccactgccgctgccg 49564
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>emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence
          Length = 81493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ccatggcggctccgtcgccg 92
             ||||||||||||||||||||
Sbjct: 45061 ccatggcggctccgtcgccg 45042
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>gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, complete sequence
          Length = 195591

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ttttcctcttctccttgtag 285
             ||||||||||||||||||||
Sbjct: 87019 ttttcctcttctccttgtag 87000
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>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 204    caccctgccgtcggcgcgggccttgcgc 231
              |||| |||||||||||| ||||||||||
Sbjct: 257678 caccgtgccgtcggcgccggccttgcgc 257651
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>emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in linkage group 1,
              complete sequence
          Length = 172983

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    acatcctgtttttcctcttc 276
              ||||||||||||||||||||
Sbjct: 102986 acatcctgtttttcctcttc 103005
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>gb|AC010463.6| Homo sapiens chromosome 19 clone CTD-2278I10, complete sequence
          Length = 118338

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   cactgccactgccgctgccg 391
             ||||||||||||||||||||
Sbjct: 73306 cactgccactgccgctgccg 73287
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>emb|CR618792.1| full-length cDNA clone CS0DL009YJ17 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1985

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 602 cactgccactgccgctgccg 583
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>dbj|AK091849.1| Homo sapiens cDNA FLJ34530 fis, clone HLUNG2008153
          Length = 1989

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 1101 cactgccactgccgctgccg 1082
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>dbj|AK021805.1| Homo sapiens cDNA FLJ11743 fis, clone HEMBA1005517, moderately
           similar to Mus musculus mRNA, complete cds, clone:2-25
          Length = 2041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 625 cactgccactgccgctgccg 606
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     cgttgatcctcaccctgccg 213
               ||||||||||||||||||||
Sbjct: 1794122 cgttgatcctcaccctgccg 1794103
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>gb|AY099658.1| Arabidopsis thaliana unknown protein (At3g26630) mRNA, complete
          cds
          Length = 1615

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 73 ccatggcggctccgtcgccg 92
          ||||||||||||||||||||
Sbjct: 45 ccatggcggctccgtcgccg 64
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>gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 262   ctgtttttcctcttctccttgtag 285
             |||||||||||||| |||||||||
Sbjct: 17447 ctgtttttcctcttatccttgtag 17470
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>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence
          Length = 188095

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    cactgccactgccgctgccg 391
              ||||||||||||||||||||
Sbjct: 141742 cactgccactgccgctgccg 141723
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>emb|BX663518.10| Zebrafish DNA sequence from clone CH211-214O7 in linkage group 7,
             complete sequence
          Length = 200579

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   tgtttttcctcttctccttg 282
             ||||||||||||||||||||
Sbjct: 99223 tgtttttcctcttctccttg 99204
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>dbj|AB169660.1| Macaca fascicularis brain cDNA, clone: QccE-15065, similar to human
           abhydrolase domain containing 8 (ABHD8), mRNA, RefSeq:
           NM_024527.2
          Length = 2094

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 659 cactgccactgccgctgccg 640
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>gb|S46000.1| TGF beta 3=transforming growth factor-beta 3 {5'region, promoter}
            [chickens, Genomic, 1829 nt]
          Length = 1829

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 80   ggctccgtcgccgccccctcgcac 103
            ||||||| ||||||||||||||||
Sbjct: 1446 ggctccgccgccgccccctcgcac 1469
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>gb|AC008043.5| Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
             BACR05A08, complete sequence
          Length = 169581

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   cactgccactgccgctgccg 391
             ||||||||||||||||||||
Sbjct: 26145 cactgccactgccgctgccg 26126
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the
            complete sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 8959 cactgccactgccgctgccg 8940
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    ctgtttttcctcttctcctt 281
              ||||||||||||||||||||
Sbjct: 523437 ctgtttttcctcttctcctt 523456
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 319   acgtcgtagccgccgacgttcttg 342
             |||||||||||| |||||||||||
Sbjct: 47250 acgtcgtagccggcgacgttcttg 47273
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 372      cactgccactgccgctgccggcgacggg 399
                ||||||| |||||||||||||| |||||
Sbjct: 38035668 cactgccgctgccgctgccggctacggg 38035695
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>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0698A10
          Length = 137348

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 372    cactgccactgccgctgccggcgacggg 399
              ||||||| |||||||||||||| |||||
Sbjct: 116612 cactgccgctgccgctgccggctacggg 116639
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>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0471B04
          Length = 138025

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 372  cactgccactgccgctgccggcgacggg 399
            ||||||| |||||||||||||| |||||
Sbjct: 3702 cactgccgctgccgctgccggctacggg 3729
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>emb|BX000349.7| Zebrafish DNA sequence from clone DKEY-63L3 in linkage group 7, complete
              sequence
          Length = 173706

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tgtttttcctcttctccttg 282
              ||||||||||||||||||||
Sbjct: 144486 tgtttttcctcttctccttg 144467
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>dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLJ15
          Length = 43481

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   ccatggcggctccgtcgccg 92
            ||||||||||||||||||||
Sbjct: 2889 ccatggcggctccgtcgccg 2870
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>emb|X97487.1|ATORF09 A.thaliana mRNA for unknown protein, ORF09
          Length = 1567

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 73 ccatggcggctccgtcgccg 92
          ||||||||||||||||||||
Sbjct: 15 ccatggcggctccgtcgccg 34
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>ref|XM_313608.2| Anopheles gambiae str. PEST ENSANGP00000003563 (ENSANGG00000010832),
            partial mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 1138 cactgccactgccgctgccg 1119
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>dbj|AK111228.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-E02, full
           insert sequence
          Length = 2639

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 gcactgccactgccgctgcc 390
           ||||||||||||||||||||
Sbjct: 404 gcactgccactgccgctgcc 385
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>gb|BC020173.1| Homo sapiens abhydrolase domain containing 8, mRNA (cDNA clone
           MGC:2512 IMAGE:3542724), complete cds
          Length = 1940

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 cactgccactgccgctgccg 391
           ||||||||||||||||||||
Sbjct: 475 cactgccactgccgctgccg 456
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>gb|AE003808.4| Drosophila melanogaster chromosome 2R, section 42 of 73 of the complete
              sequence
          Length = 260367

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    tgcactgccactgccgctgc 389
              ||||||||||||||||||||
Sbjct: 149703 tgcactgccactgccgctgc 149684
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>emb|X58127.1|GGTGFB3 Gallus gallus TGF-beta3 gene for transforming growth factor-beta3
          Length = 4130

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 80   ggctccgtcgccgccccctcgcac 103
            ||||||| ||||||||||||||||
Sbjct: 2223 ggctccgccgccgccccctcgcac 2246
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>dbj|AK122593.1| Homo sapiens mRNA for FLJ00419 protein
          Length = 4662

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  cactgccactgccgctgccg 391
            ||||||||||||||||||||
Sbjct: 3192 cactgccactgccgctgccg 3173
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>gb|AC004248.1|AC004248 Drosophila melanogaster (P1 DS03910 (D165)) DNA sequence, complete
             sequence
          Length = 77409

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   tgcactgccactgccgctgc 389
             ||||||||||||||||||||
Sbjct: 39063 tgcactgccactgccgctgc 39082
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>gb|M31154.1|CHKTGFB Chicken transforming growth factor beta (TGF-beta-3) mRNA, complete
           cds
          Length = 2187

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 80  ggctccgtcgccgccccctcgcac 103
           ||||||| ||||||||||||||||
Sbjct: 16  ggctccgccgccgccccctcgcac 39
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>dbj|AP000545.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome
            region, clone:c68B10
          Length = 37247

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  tcctgtttttcctcttctcc 279
            ||||||||||||||||||||
Sbjct: 8277 tcctgtttttcctcttctcc 8258


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,458,081
Number of Sequences: 3902068
Number of extensions: 2458081
Number of successful extensions: 55719
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55041
Number of HSP's gapped (non-prelim): 678
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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