ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet41d03 |
|---|---|
| Clone Library Name | barley_pub |
>MSK1_MEDSA (P51137) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1)| Length = 411 Score = 83.2 bits (204), Expect = 1e-16 Identities = 36/43 (83%), Positives = 38/43 (88%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LP GRFLPPLFNFKPHELKG+P+E MKL PEHAR QCPFLGL Sbjct: 369 LPTGRFLPPLFNFKPHELKGVPVETLMKLVPEHARKQCPFLGL 411
>KSG1_ARATH (P43288) Shaggy-related protein kinase alpha (EC 2.7.11.1)| (ASK-alpha) Length = 405 Score = 82.8 bits (203), Expect = 2e-16 Identities = 35/43 (81%), Positives = 39/43 (90%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LPNGRFLPPLFNFKPHELKG+P+E+ KL PEHAR QCP+LGL Sbjct: 363 LPNGRFLPPLFNFKPHELKGVPLEMVAKLVPEHARKQCPWLGL 405
>KSG3_ARATH (P43289) Shaggy-related protein kinase gamma (EC 2.7.11.1)| (ASK-gamma) Length = 409 Score = 80.1 bits (196), Expect = 1e-15 Identities = 34/43 (79%), Positives = 38/43 (88%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LPNGRFLPPLFNFKPHELKG+P+E+ KL PEHAR QCP+L L Sbjct: 367 LPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQCPWLSL 409
>MSK1_TOBAC (Q40518) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1)| Length = 409 Score = 70.9 bits (172), Expect = 7e-13 Identities = 32/43 (74%), Positives = 34/43 (79%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LPNGR LPPLFNFK HELKG+ E +KL PEHAR QCP LGL Sbjct: 367 LPNGRVLPPLFNFKAHELKGVSAENLLKLVPEHARKQCPSLGL 409
>KSG5_ARATH (Q8VZD5) Shaggy-related protein kinase epsilon (EC 2.7.11.1)| (ASK-epsilon) Length = 410 Score = 67.8 bits (164), Expect = 6e-12 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LPNGR LPPLFNFKP ELKG +E+ KL P+HAR QC FL L Sbjct: 368 LPNGRALPPLFNFKPQELKGASLELLSKLIPDHARKQCSFLAL 410
>MSK3_MEDSA (P51139) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1)| Length = 411 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/42 (69%), Positives = 33/42 (78%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLG 248 LPNGRFLPPLFNFK +ELKG+P E+ +KL P HAR QC G Sbjct: 368 LPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPHARKQCALFG 409
>MSK2_MEDSA (P51138) Glycogen synthase kinase-3 homolog MsK-2 (EC 2.7.11.1)| Length = 411 Score = 63.2 bits (152), Expect = 2e-10 Identities = 27/38 (71%), Positives = 31/38 (81%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQC 260 LPNGR LPPLFNFK +ELKG+P E+ +KL P HAR QC Sbjct: 368 LPNGRHLPPLFNFKANELKGVPAEMLVKLVPSHARKQC 405
>KSG10_ARATH (Q39019) Shaggy-related protein kinase kappa (EC 2.7.11.1)| (ASK-kappa) (AtK-1) Length = 421 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/43 (67%), Positives = 32/43 (74%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LPNGR LPPLFNFKP EL G+P EI +L PEHAR Q F+ L Sbjct: 377 LPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARKQNLFMAL 419
>KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.11.1)| (ASK-delta) Length = 420 Score = 60.8 bits (146), Expect = 8e-10 Identities = 28/43 (65%), Positives = 31/43 (72%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCPFLGL 245 LPNGR LPPLFNFKP EL G+P E +L PEHAR Q F+ L Sbjct: 376 LPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARKQNHFMAL 418
>KSG9_ARATH (Q39012) Shaggy-related protein kinase iota (EC 2.7.11.1)| (ASK-iota) Length = 407 Score = 47.4 bits (111), Expect = 9e-06 Identities = 24/37 (64%), Positives = 26/37 (70%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LPNGR LPPLFNFK EL G ME+ +L PEH R Q Sbjct: 364 LPNGRPLPPLFNFK-QELGGASMELINRLIPEHVRRQ 399
>KSG2_ARATH (O23145) Shaggy-related protein kinase beta (EC 2.7.11.1)| (ASK-beta) Length = 431 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/35 (60%), Positives = 25/35 (71%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHAR 269 LPNGR LPPLF+F EL G +E+ +L PEHAR Sbjct: 396 LPNGRALPPLFDFTAQELAGASVELRHRLIPEHAR 430
>KSG6_ARATH (Q39010) Shaggy-related protein kinase dzeta (EC 2.7.11.1)| (ASK-dzeta) Length = 412 Score = 45.4 bits (106), Expect = 3e-05 Identities = 23/37 (62%), Positives = 25/37 (67%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LPNGR LPPLFNFK EL G E+ +L PEH R Q Sbjct: 366 LPNGRPLPPLFNFK-QELSGASPELINRLIPEHVRRQ 401
>KSG8_ARATH (Q96287) Shaggy-related protein kinase theta (EC 2.7.11.1)| (ASK-theta) Length = 472 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/35 (54%), Positives = 22/35 (62%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHAR 269 LPNGR LPPLFNF EL G E+ +L P H + Sbjct: 432 LPNGRALPPLFNFTAQELAGASTELRQRLIPAHCQ 466
>KSGT_BRANA (O04160) Shaggy-related protein kinase theta (EC 2.7.11.1)| (ASK-theta) Length = 468 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/35 (54%), Positives = 22/35 (62%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHAR 269 LPNGR LPPLFNF EL G E+ +L P H + Sbjct: 428 LPNGRALPPLFNFTAQELAGASTELRQRLIPAHCQ 462
>KSG7_ARATH (Q39011) Shaggy-related protein kinase eta (EC 2.7.11.1) (ASK-eta)| (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1) Length = 380 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/37 (54%), Positives = 24/37 (64%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LPNGR PPLFNFK E+ G E+ KL P+H + Q Sbjct: 334 LPNGRPFPPLFNFK-QEVAGSSPELVNKLIPDHIKRQ 369
>SGG_DROME (P18431) Protein kinase shaggy (EC 2.7.11.1) (Protein zeste-white 3)| Length = 1067 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARS 266 LPNGR +PPLFNF HEL P + +L P+H ++ Sbjct: 902 LPNGRDMPPLFNFTEHELSIQP-SLVPQLLPKHLQN 936
>GSK3A_RAT (P18265) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3| alpha) (Factor A) (FA) Length = 483 Score = 37.0 bits (84), Expect = 0.012 Identities = 21/36 (58%), Positives = 22/36 (61%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARS 266 LPN R LPPLFNF P EL P A+ L P H RS Sbjct: 413 LPNNRPLPPLFNFSPGELSIQPSLNAI-LIPPHLRS 447
>GSK3H_DICDI (P51136) Glycogen synthase kinase-3 homolog (EC 2.7.11.26) (GSK-3)| Length = 467 Score = 36.2 bits (82), Expect = 0.020 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LP+G+ LPPLFNF E + ++A L P HA +Q Sbjct: 349 LPDGKPLPPLFNFTIAEQTSIGPKLAKTLIPSHAMNQ 385
>GSK3B_RAT (P18266) Glycogen synthase kinase-3 beta (EC 2.7.11.26) (GSK-3| beta) (Factor A) (FA) Length = 420 Score = 35.8 bits (81), Expect = 0.026 Identities = 20/37 (54%), Positives = 21/37 (56%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LPNGR P LFNF EL P +A L P HAR Q Sbjct: 350 LPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQ 385
>GSK3B_MOUSE (Q9WV60) Glycogen synthase kinase-3 beta (EC 2.7.11.26) (GSK-3| beta) Length = 420 Score = 35.8 bits (81), Expect = 0.026 Identities = 20/37 (54%), Positives = 21/37 (56%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LPNGR P LFNF EL P +A L P HAR Q Sbjct: 350 LPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQ 385
>GSK3B_HUMAN (P49841) Glycogen synthase kinase-3 beta (EC 2.7.11.26) (GSK-3| beta) Length = 420 Score = 35.8 bits (81), Expect = 0.026 Identities = 20/37 (54%), Positives = 21/37 (56%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQ 263 LPNGR P LFNF EL P +A L P HAR Q Sbjct: 350 LPNGRDTPALFNFTTQELSSNP-PLATILIPPHARIQ 385
>GSK3_SCHPO (Q10452) Protein kinase gsk3 (EC 2.7.11.1) (Protein kinaae skp1)| Length = 387 Score = 35.0 bits (79), Expect = 0.044 Identities = 18/35 (51%), Positives = 20/35 (57%) Frame = -1 Query: 361 RFLPPLFNFKPHELKGLPMEIAMKLAPEHARSQCP 257 R LP LFNF P EL P ++ KL P HAR P Sbjct: 337 RHLPELFNFSPFELSIRP-DLNQKLIPSHARDALP 370
>GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3| alpha) Length = 483 Score = 33.9 bits (76), Expect = 0.099 Identities = 20/36 (55%), Positives = 21/36 (58%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHELKGLPMEIAMKLAPEHARS 266 LPN R LPPLFNF EL P A+ L P H RS Sbjct: 413 LPNNRPLPPLFNFSAGELSIQPSLNAI-LIPPHLRS 447
>GSK3H_DROME (P83101) Putative glycogen synthase kinase-3 homolog (EC 2.7.11.26)| (GSK-3) (Protein gasket) Length = 501 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -1 Query: 373 LPNGRFLPPLFNFKPHE 323 LPNGR LPPLFNF +E Sbjct: 328 LPNGRSLPPLFNFTDYE 344
>SOX1_HUMAN (O00570) SOX-1 protein| Length = 387 Score = 31.2 bits (69), Expect = 0.64 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = +1 Query: 79 PGSSRPHPNR-PKQQQRHHPHDHVQLFRRLVSR*DVGALFASMTDSNAHVANKTDPTALG 255 PG+ HP+R P HHPH H + + R D+GAL S ++ + + G Sbjct: 217 PGAGGAHPHRTPAHPHPHHPHAHPH-NPQPMHRYDMGALQYSPISNSQGYMSASPSGYGG 275 Query: 256 RGIGSSRARGPASLRSPLEAPSAREA 333 G++ A A S + A +A A Sbjct: 276 LPYGAAAAAAAAHQNSAVAAAAAAAA 301
>GPRS_DROME (O61366) Serine-enriched protein| Length = 1302 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/95 (25%), Positives = 42/95 (44%) Frame = +1 Query: 25 YCVSVTAILTYSVIRTLCPGSSRPHPNRPKQQQRHHPHDHVQLFRRLVSR*DVGALFASM 204 Y + + A+ + ++ PG P+ +R + RHH H + R+ S+ S Sbjct: 310 YAIIMNALAYQADPESIDPGKLSPNSSRQHHRHRHH-HQSLPKIRKAKSQSFRTRRSPSE 368 Query: 205 TDSNAHVANKTDPTALGRGIGSSRARGPASLRSPL 309 S + N T T+L G G + R P + +SP+ Sbjct: 369 RRSPNNAPNLTLNTSLTSGNGEKK-RSPLTPKSPV 402
>SOXB_CORS1 (P40875) Sarcosine oxidase beta subunit (EC 1.5.3.1) (Sarcosine| oxidase subunit B) Length = 405 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = -1 Query: 289 LAPEHARSQCPFLGL*GLSCWLHVRCCLSC*RIALLRPT*RPGVGTTEHDHVGGVFAVAL 110 L PE + CP + + G R ++ T +P G +HDHV FA Sbjct: 137 LTPEQVKEVCPIINI-GDDI-----------RYPVMGATYQPRAGIAKHDHVAWAFARKA 184 Query: 109 DGLGV--VLNCQ 80 + +GV + NC+ Sbjct: 185 NEMGVDIIQNCE 196
>Y1748_GEOSL (Q74CC6) Hypothetical RNA methyltransferase GSU1748 (EC 2.1.1.-)| Length = 438 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 334 KPHELKGLPMEIAMKLAPEHARSQCPFLGL*GLSCWLHVR 215 KP L+G +EI ++ +P+ CP G+ G W H+R Sbjct: 45 KPSYLEGETLEI-LEPSPDRIAPPCPVFGICGGCSWQHLR 83
>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)| Length = 765 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +1 Query: 49 LTYSVIRTLCPGSSRPHPNRPKQQQRHHPHDH-VQLF 156 LT S L + RP P RP+Q R + H+H QLF Sbjct: 204 LTISAAHWLTAPAPRPRPRRPRQLTRAYWHNHRSQLF 240
>GLGB_NEIDE (Q9RQI5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 762 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 121 QRH--HPHDHVQLFRRLVSR*DVGALFA-SMTDSNAHVANKTDPTALGRGIGSSRARGPA 291 +RH PH L+ + + AL+ S+ D+N ++ K DP A G + + A Sbjct: 174 RRHAMRPHTGNGLWDIFIPGVGLNALYKFSVLDANGNIREKADPYAFGAELRPTTASVVR 233 Query: 292 SLRSPLEAPSAR 327 L + EAP+ R Sbjct: 234 GLPAKAEAPAFR 245
>CCNT1_MOUSE (Q9QWV9) Cyclin-T1 (Cyclin-T) (CycT1)| Length = 724 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Frame = +1 Query: 91 RPHPNRPKQQQRHHPH--DHVQLFRRLVSR*DVGALFASMTDSNAHVANKTDPTALGRGI 264 R HP+ HH H H+QL VS+ +S T + AH T Sbjct: 510 RTHPSNHHHHHNHHSHRHSHLQLPAGPVSKRPSDPKHSSQTSTLAHKTYSLSSTL--SSS 567 Query: 265 GSSRARGP 288 S+R RGP Sbjct: 568 SSTRKRGP 575
>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) Length = 418 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = -3 Query: 371 PQRPVPTSPLQLQASRAEGASNGDRNEAGPRAREEP 264 P RP+P + A A R GPRAR EP Sbjct: 11 PARPLPPYERESAAPEPHCAEPAPRRHLGPRARSEP 46
>SOX1_MOUSE (P53783) SOX-1 protein| Length = 391 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Frame = +1 Query: 79 PGSSRPHPN-RPKQQQRHHPHDHVQLFRRLVSR*DVGAL-FASMTDSNAHVANKTD---P 243 PG+ HP+ P HHPH H + + R D+GAL ++ +++S +++ Sbjct: 217 PGAGGRHPHAHPAHPHPHHPHAHPH-NPQPMHRYDMGALQYSPISNSQGYMSASPSGYGG 275 Query: 244 TALGRGIGSSRARGPASLRSPLEAPSAREA 333 G ++ A G A S + A +A A Sbjct: 276 IPYGAAAAAAAAAGGAHQNSAVAAAAAAAA 305
>B3A3_HUMAN (P48751) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) (Cardiac/brain band 3-like protein) (CAE3/BAE3) Length = 1232 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Frame = +1 Query: 52 TYSVIRTLCPGSSRPHPNRPKQQQRHHPHDHVQLFRRLVSR*DVGALFASMTDSN----A 219 +Y + LCPGS+ +P P+QQ P D + +++ D+ + + + N Sbjct: 228 SYDLRERLCPGSALGNPGGPEQQV---PTDEAE--AQMLGSADLDDMKSHRLEDNPGVRR 282 Query: 220 HVANKTDPTALGRGIGSSRA 279 H+ K T GRG S A Sbjct: 283 HLVKKPSRTQGGRGSPSGLA 302
>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 407 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 28 CVSVTAILTYSVIRTLCPGSSRPHPNRPKQQQR-HHPH 138 C SVTA+ ++ R C P P P+ + R + PH Sbjct: 176 CNSVTAVYAHNTQRCSCDSRPYPPPPEPRNENRSYFPH 213
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -3 Query: 371 PQRPVPTSPLQLQASRAEGASNGDRNEAGPRAREEPMPLPRAVGSVLLAT 222 P P P P S A A N + + P A +EP+ P+A+ ++ AT Sbjct: 1532 PAPPAPQHPSAAALSSAP-ADNSMPHRSSPYAPQEPVQKPQAINNIAPAT 1580
>CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)| (hPc2) Length = 558 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/33 (33%), Positives = 14/33 (42%) Frame = +1 Query: 46 ILTYSVIRTLCPGSSRPHPNRPKQQQRHHPHDH 144 +L + R P S PHP+ HH H H Sbjct: 366 LLAWDPARNTHPPSHHPHPHPHHHHHHHHHHHH 398
>CCG8_MOUSE (Q8VHW2) Voltage-dependent calcium channel gamma-8 subunit| (Neuronal voltage-gated calcium channel gamma-8 subunit) Length = 423 Score = 27.7 bits (60), Expect = 7.1 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = +1 Query: 61 VIRTLCPGSSRPHPNRPKQQQRHHPHDHVQLFRRL--VSR*DVGALFASM---TDSNAHV 225 VI + + P P R ++++ H+ + F L + +G L ++ AH Sbjct: 176 VIVYISANAGEPGPKRDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREAHC 235 Query: 226 ANKTDPTALGRGIGSSRARGPASLRSPLEAPSAR 327 +++D G G G S GP+++ L PS R Sbjct: 236 QSRSDLLKAGGGAGGSGGSGPSAI---LRLPSYR 266
>PACC_FUSOX (Q870A3) pH-response transcription factor pacC/RIM101| Length = 609 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/49 (26%), Positives = 22/49 (44%) Frame = -3 Query: 362 PVPTSPLQLQASRAEGASNGDRNEAGPRAREEPMPLPRAVGSVLLATCA 216 P P QLQ + +G+S+GD + + P P A + ++ A Sbjct: 4 PAPEQKPQLQQQQQQGSSSGDSSSGSANDSKSVTPAPSATSNTSQSSTA 52
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 17/43 (39%) Frame = +1 Query: 70 TLCPGS-------------SRPHPNRPKQQQRH----HPHDHV 147 TL PGS PHP+ +QQQ+H HPH H+ Sbjct: 73 TLIPGSPPHHLMAPPAHGLPYPHPHAQQQQQQHLQAPHPHPHL 115
>WN10A_HUMAN (Q9GZT5) Protein Wnt-10a precursor| Length = 417 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 284 PRAREEPMPLPRAVGSVLLATCALLSVMLANSAPTSYLETR 162 P R P P PR VLL LL+ + SAP L+ R Sbjct: 8 PWLRLRPQPQPRPALWVLLFFLLLLAAAMPRSAPNDILDLR 48
>CCG8_RAT (Q8VHW5) Voltage-dependent calcium channel gamma-8 subunit| (Neuronal voltage-gated calcium channel gamma-8 subunit) Length = 421 Score = 27.7 bits (60), Expect = 7.1 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = +1 Query: 61 VIRTLCPGSSRPHPNRPKQQQRHHPHDHVQLFRRL--VSR*DVGALFASM---TDSNAHV 225 VI + + P P R ++++ H+ + F L + +G L ++ AH Sbjct: 176 VIVYISANAGEPGPKRDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREAHC 235 Query: 226 ANKTDPTALGRGIGSSRARGPASLRSPLEAPSAR 327 +++D G G G S GP+++ L PS R Sbjct: 236 QSRSDLLKAGGGAGGSGGSGPSAI---LRLPSYR 266
>UL79_HCMVA (P16752) Protein UL79| Length = 295 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +1 Query: 85 SSRPHPNRPKQQQRHHP 135 S PH P+QQQ HHP Sbjct: 244 SRHPHRPHPQQQQHHHP 260
>SYFB_CHLAB (Q5L6W7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 794 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -1 Query: 331 PHELKGLPMEIAMKLAPEHARSQCPF 254 P E P+EI K +P H S CPF Sbjct: 194 PQEFSFSPLEIITKDSPSHDTSICPF 219
>CCG8_HUMAN (Q8WXS5) Voltage-dependent calcium channel gamma-8 subunit| (Neuronal voltage-gated calcium channel gamma-8 subunit) Length = 425 Score = 27.7 bits (60), Expect = 7.1 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = +1 Query: 61 VIRTLCPGSSRPHPNRPKQQQRHHPHDHVQLFRRL--VSR*DVGALFASM---TDSNAHV 225 VI + + P P R ++++ H+ + F L + +G L ++ AH Sbjct: 177 VIVYISANAGEPGPKRDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREAHC 236 Query: 226 ANKTDPTALGRGIGSSRARGPASLRSPLEAPSAR 327 +++D G G G S GP+++ L PS R Sbjct: 237 QSRSDLLKAGGGAGGSGGSGPSAI---LRLPSYR 267
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +1 Query: 79 PGSSRPHPNRPKQQQRHHPHDH 144 PG PH +RP H HDH Sbjct: 785 PGHGGPHGHRPHDVPSHRGHDH 806
>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11| Length = 562 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 353 TSPLQLQASRAEGASNGDRNEAGPRAREEPMPLPRAVGS 237 TS QL+ ++ A G RN++ +EEP P AV S Sbjct: 342 TSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 380
>ZMY11_HUMAN (Q15326) Zinc finger MYND domain-containing protein 11 (Adenovirus| 5 E1A-binding protein) (BS69 protein) Length = 562 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 353 TSPLQLQASRAEGASNGDRNEAGPRAREEPMPLPRAVGS 237 TS QL+ ++ A G RN++ +EEP P AV S Sbjct: 342 TSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 380
>STAR_DROME (P42519) Protein Star| Length = 597 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +1 Query: 97 HPNRPKQQQRHHPHDH 144 HP+R QQ+HH H H Sbjct: 223 HPHRQHHQQQHHHHHH 238
>HFQ_MANSM (Q65SD5) Protein hfq| Length = 96 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 34 SVTAILTYSVIRTLCPGSSRPHPNRPKQQQRH 129 +V ++ I T+ P S H N P+QQQ+H Sbjct: 49 TVNQMVYKHAISTVVPARSVSHHNNPQQQQQH 80
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 888 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +1 Query: 79 PGSSRPHPNRPKQQQRHHPHDH 144 PG PH +RP H HDH Sbjct: 801 PGHGGPHGHRPHDVPSHRGHDH 822
>MTRM_DROYA (P83733) Protein matrimony (Cell cycle arrest protein D52)| Length = 219 Score = 27.3 bits (59), Expect = 9.3 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = +1 Query: 79 PGSSRPHPNRPKQQQRHHPHDH 144 P + PHP++ + HH H H Sbjct: 75 PAKAHPHPHQHQHHHHHHKHIH 96
>GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific 2-like 2)| (GAS2-related protein on chromosome 17) (GAR17 protein) Length = 880 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 335 QASRAEGASNGDRNEAGPRAREEPMPL 255 +ASR +GAS G+ E G +E PL Sbjct: 826 EASRVDGASVGEEEEEGKEEKEPAAPL 852
>GSPE_PECCC (P31703) General secretion pathway protein E (Type II traffic| warden ATPase) (Pectic enzymes secretion protein outE) Length = 498 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 Query: 34 SVTAILTYSVIRTLCPGSSRPHPNRPKQQQR 126 S+ +L ++RTLC S+P P P Q ++ Sbjct: 380 SLLGVLAQRLVRTLCSDCSQPQPVDPVQAEQ 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,821,075 Number of Sequences: 219361 Number of extensions: 871762 Number of successful extensions: 3327 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 3068 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3294 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
