| Clone Name | rbaet41c10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TDRD7_RAT (Q9R1R4) Tudor domain-containing protein 7 (Tudor repe... | 28 | 6.2 | 2 | FA54A_HUMAN (Q6P444) Protein FAM54A (DUF729 domain containing pr... | 28 | 8.1 |
|---|
>TDRD7_RAT (Q9R1R4) Tudor domain-containing protein 7 (Tudor repeat associator| with PCTAIRE 2) (Trap) Length = 1113 Score = 28.1 bits (61), Expect = 6.2 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 258 ERPPHRHCPVK*LPSKFSPPVVPD 187 ERPP P + +PSK SP V+PD Sbjct: 332 ERPPPPPAPRQEVPSKGSPAVMPD 355
>FA54A_HUMAN (Q6P444) Protein FAM54A (DUF729 domain containing protein 1)| Length = 385 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -3 Query: 253 PPPPALPCQVTPLE--IFPTRRPG*SIFCNENS 161 PPPP LP Q + L+ FP +PG + C+ ++ Sbjct: 209 PPPPPLPPQFSSLQPPCFPPVQPGSNNICDSDN 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,564,484 Number of Sequences: 219361 Number of extensions: 495695 Number of successful extensions: 1433 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1428 length of database: 80,573,946 effective HSP length: 63 effective length of database: 66,754,203 effective search space used: 1602100872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)