>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 34.7 bits (78), Expect = 0.063
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 303 YLEAGQGKTPLGALGL 256
           Y EAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 256

>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 34.7 bits (78), Expect = 0.063
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 303 YLEAGQGKTPLGALGL 256
           Y EAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 256

>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 34.7 bits (78), Expect = 0.063
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 303 YLEAGQGKTPLGALGL 256
           Y EAGQGKTPLGALGL
Sbjct: 246 YFEAGQGKTPLGALGL 261

>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)|
           (RNA polymerase I subunit 2)
          Length = 1234

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 54  ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 143
           +T+   WRK EYLIP  +  + L E  D +
Sbjct: 252 VTFRFSWRKNEYLIPVMMIMKALVETNDRE 281

>EMAL2_HUMAN (O95834) Echinoderm microtubule-associated protein-like 2 (EMAP-2)|
           (HuEMAP-2)
          Length = 649

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 248 IFGWRAVGERVCCIASDRTHGLNGICSTSNKQQHFICVRDF 126
           + G       VCC+   +++G N +C+      H + V D+
Sbjct: 152 VLGLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDW 192

>RPA2_SCHPO (Q9P7X8) Probable DNA-directed RNA polymerase I polypeptide 2 (EC|
           2.7.7.6) (RNA polymerase I subunit 2)
          Length = 1227

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +3

Query: 3   IKCLLPILP*ITELGLYIT-----WYIRWRKKEYLIPHSIYTRHLKEVTDTD 143
           I+C+ P    +T    Y+      +   WRK EYLIP  +  + L E +D +
Sbjct: 268 IRCVRPDQSSLTNTLHYLNNGVTMFRFHWRKNEYLIPSMMILKALLETSDKE 319

>RPA2_ASHGO (Q75DS1) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)|
           (RNA polymerase I subunit 2)
          Length = 1198

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 54  ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 143
           +T+   WRK EYL+P  +  + L + +D +
Sbjct: 252 VTFRFSWRKNEYLVPVVLILKALTDASDRE 281


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,814,226
Number of Sequences: 219361
Number of extensions: 803707
Number of successful extensions: 2079
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2079
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)