| Clone Name | rbaet40g11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TX60A_PHYSE (P58911) Toxin PsTX-60A precursor | 28 | 4.8 | 2 | COLL2_MIMIV (Q5UQ13) Collagen-like protein 2 | 28 | 8.3 |
|---|
>TX60A_PHYSE (P58911) Toxin PsTX-60A precursor| Length = 501 Score = 28.5 bits (62), Expect = 4.8 Identities = 9/27 (33%), Positives = 18/27 (66%) Frame = -3 Query: 201 CYPSRRASSSFGYCRVVGLSLWFTVPS 121 CYP++ + ++ CR+ GL+ W + P+ Sbjct: 439 CYPNKESGFAWHGCRLHGLTCWCSAPN 465
>COLL2_MIMIV (Q5UQ13) Collagen-like protein 2| Length = 1595 Score = 27.7 bits (60), Expect = 8.3 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +2 Query: 32 RYYDDIYKQRLRYAVPGTP 88 R+YD + QR Y++PG P Sbjct: 26 RFYDQLISQRYAYSIPGIP 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,250,833 Number of Sequences: 219361 Number of extensions: 562920 Number of successful extensions: 1243 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1243 length of database: 80,573,946 effective HSP length: 55 effective length of database: 68,509,091 effective search space used: 1644218184 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)