| Clone Name | rbaet40e09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL929414.5| Mouse DNA sequence from clone RP23-222A19 on chromosome 11, complete sequence Length = 153928 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atgtaaaactacttgagatt 110 |||||||||||||||||||| Sbjct: 39300 atgtaaaactacttgagatt 39281
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tgaattgtatgcatgcttg 20 ||||||||||||||||||| Sbjct: 54335 tgaattgtatgcatgcttg 54317
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 38.2 bits (19), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 134 ctccccacagctttctgggtcag 156 ||||||| ||||||||||||||| Sbjct: 144596 ctccccatagctttctgggtcag 144574
>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence Length = 178068 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 tgtaaaactacttgagatt 110 ||||||||||||||||||| Sbjct: 132342 tgtaaaactacttgagatt 132324
>gb|AC005817.8| Mus musculus strain 129/Sv clone ct7-581i11 map 16, complete sequence Length = 188708 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 ctccccacagctttctggg 152 ||||||||||||||||||| Sbjct: 168737 ctccccacagctttctggg 168755
>emb|AL161913.11| Human DNA sequence from clone RP11-64P11 on chromosome 9, complete sequence Length = 137897 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 gcatgcttggattcatcca 30 ||||||||||||||||||| Sbjct: 44243 gcatgcttggattcatcca 44261
>gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, complete sequence Length = 170361 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tgaattgtatgcatgcttg 20 ||||||||||||||||||| Sbjct: 15535 tgaattgtatgcatgcttg 15553
>gb|AC155228.11| Medicago truncatula clone mth2-139i19, complete sequence Length = 112322 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 tatgcatgcttggattcat 27 ||||||||||||||||||| Sbjct: 6182 tatgcatgcttggattcat 6164
>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence Length = 131548 Score = 38.2 bits (19), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 139 cacagctttctgggtcagtgaaa 161 |||||||||||||| |||||||| Sbjct: 79713 cacagctttctggggcagtgaaa 79735
>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone ct7-342a4, complete sequence Length = 154201 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 134 ctccccacagctttctggg 152 ||||||||||||||||||| Sbjct: 153898 ctccccacagctttctggg 153880
>gb|AC147870.3| Monodelphis domestica clone VMRC6-297C9, complete sequence Length = 130886 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 atgtaaaactacttgagat 109 ||||||||||||||||||| Sbjct: 93857 atgtaaaactacttgagat 93839
>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence Length = 162101 Score = 38.2 bits (19), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 139 cacagctttctgggtcagtgaaa 161 |||||||||||||| |||||||| Sbjct: 51840 cacagctttctggggcagtgaaa 51818
>gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-397e16, complete sequence Length = 214471 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 ctccccacagctttctggg 152 ||||||||||||||||||| Sbjct: 168771 ctccccacagctttctggg 168789
>gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone rp23-117j21, complete sequence Length = 215057 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 134 ctccccacagctttctggg 152 ||||||||||||||||||| Sbjct: 156349 ctccccacagctttctggg 156331
>emb|AL935270.6| Mouse DNA sequence from clone RP23-391A14 on chromosome 2, complete sequence Length = 127274 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 135 tccccacagctttctgggt 153 ||||||||||||||||||| Sbjct: 48662 tccccacagctttctgggt 48644
>gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-428i4, complete sequence Length = 211848 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 134 ctccccacagctttctggg 152 ||||||||||||||||||| Sbjct: 66004 ctccccacagctttctggg 65986
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 atgtaaaactacttgagat 109 ||||||||||||||||||| Sbjct: 1341535 atgtaaaactacttgagat 1341517 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 720,570 Number of Sequences: 3902068 Number of extensions: 720570 Number of successful extensions: 42909 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42880 Number of HSP's gapped (non-prelim): 29 length of query: 162 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 140 effective length of database: 17,147,199,772 effective search space: 2400607968080 effective search space used: 2400607968080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)