ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet40c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 347 2e-92
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 347 2e-92
3dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
4dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
6dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
7dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
8ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
10dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
11dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
12gb|DQ485150.1| Burkholderia cepacia MPS gene, partial sequence 46 0.089
13gb|AF185273.1|AF185273 Burkholderia cepacia unknown sequence 46 0.089
14ref|XM_550168.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
15ref|XM_476345.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
16gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, compl... 42 1.4
17gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, comp... 42 1.4
18emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 42 1.4
19gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of... 42 1.4
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23gb|AC010002.6|AC010002 Homo sapiens chromosome 7 clone RP11-194N... 42 1.4
24dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27dbj|AK120703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
28gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.4
29gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
30emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.4
31emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471... 42 1.4
32ref|XM_550169.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
33ref|NM_190569.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
34ref|NM_190078.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
35ref|NM_186687.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
36gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.5
37gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.5
38gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 5.5
39gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, co... 40 5.5
40emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 40 5.5
41emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.5
42gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regu... 40 5.5
43dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH30316... 40 5.5
44dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.5
45dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
46gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.5
47dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
48gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, co... 40 5.5
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.5
50emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 40 5.5 
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  347 bits (175), Expect = 2e-92
 Identities = 277/311 (89%)
 Strand = Plus / Minus

                                                                         
Query: 102   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 161
             ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 89775 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 89716

                                                                         
Query: 162   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 221
             |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 89715 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 89656

                                                                         
Query: 222   gacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcg 281
             |||||   ||  ||| |||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 89655 gacgtttccgacgccacgccgccgtccaccacaccgaggcagagagcgccgcccttggtg 89596

                                                                         
Query: 282   gccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcaccagc 341
             |||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 89595 gccaccatcgagttcgccccgaacaccacccacgacgtggcctcgctctggaacaccagc 89536

                                                                         
Query: 342   tccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtagcac 401
             || ||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||
Sbjct: 89535 tcgaccgtcggcacggccggccccacgcgtgtgcccgccaccttgctcccgtcgtagcac 89476

                        
Query: 402   agcttgaacgg 412
             |||||||||||
Sbjct: 89475 agcttgaacgg 89465



 Score =  281 bits (142), Expect = 9e-73
 Identities = 271/314 (86%)
 Strand = Plus / Minus

                                                                         
Query: 99    ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 158
             |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 96657 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 96598

                                                                         
Query: 159   ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 218
             |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 96597 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 96538

                                                                         
Query: 219   accgacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 278
             |||||||||  ||||||  |||| || ||||| ||||||| ||||||||||||| |||||
Sbjct: 96537 accgacgtctccggggctacgcctccatccacaacgccgaagcagagcgcgccgtccttg 96478

                                                                         
Query: 279   gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 338
             | ||||||||| ||||| ||||||||||||||||||||| |||| | | |||||||||||
Sbjct: 96477 gtggccaccatagagttcgccccgaacaccacccacgacacggctttgctctgcagcacc 96418

                                                                         
Query: 339   agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 398
             ||||| || |||||||||||||| ||| ||||||||||||||||| || |||||||||||
Sbjct: 96417 agctcgacggtcggcacggccggccccgcgcgggtgctccccaccatggtcccgtcgtag 96358

                           
Query: 399   cacagcttgaacgg 412
             || |||||||||||
Sbjct: 96357 caaagcttgaacgg 96344



 Score =  270 bits (136), Expect = 3e-69
 Identities = 211/236 (89%)
 Strand = Plus / Minus

                                                                          
Query: 177    aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 236
              |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 103640 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 103581

                                                                          
Query: 237    gcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcggccaccatcgagttg 296
              | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 103580 gtgccggcgtccaccacgccgaggcagagcgcgcctcccttggtggccaccatcgagttc 103521

                                                                          
Query: 297    gccccgaacaccacccacgacgcggcctcgttctgcagcaccagctccaccgtcggcacg 356
              ||||||||||| |||||||| ||  ||  | | |||||||||||||| |  |||||||||
Sbjct: 103520 gccccgaacacaacccacgaggcacccgtgctttgcagcaccagctcgatggtcggcacg 103461

                                                                      
Query: 357    gccgggcccacgcgggtgctccccaccttgctcccgtcgtagcacagcttgaacgg 412
              ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 103460 gccggccccacgcgcgtgctccccaccttcctcccgtcgtagcacagcttgaacgg 103405



 Score =  262 bits (132), Expect = 8e-67
 Identities = 269/314 (85%), Gaps = 3/314 (0%)
 Strand = Plus / Minus

                                                                         
Query: 102   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 161
             ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 92274 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 92215

                                                                         
Query: 162   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 221
             | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 92214 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 92155

                                                                         
Query: 222   gacgtccg---cggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 278
             || | | |   | | || | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 92154 gatgacggatacagcgcggggccgccgtccaccacgccaaggcagagcgcgccgcccttg 92095

                                                                         
Query: 279   gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 338
             |||| |||||||||||| |||||| |||  | ||||||| |||||||  |||||||||||
Sbjct: 92094 gcgggcaccatcgagtttgccccgtacatgatccacgacacggcctccctctgcagcacc 92035

                                                                         
Query: 339   agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 398
             ||||| | ||||||||| || || ||| ||||||||||||| || |||| ||||||||||
Sbjct: 92034 agctcaatcgtcggcaccgctggccccgcgcgggtgctccctactttgcgcccgtcgtag 91975

                           
Query: 399   cacagcttgaacgg 412
             ||||||| ||||||
Sbjct: 91974 cacagctcgaacgg 91961
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  347 bits (175), Expect = 2e-92
 Identities = 277/311 (89%)
 Strand = Plus / Minus

                                                                            
Query: 102      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 161
                ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 19489063 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 19489004

                                                                            
Query: 162      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 221
                |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 19489003 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 19488944

                                                                            
Query: 222      gacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcg 281
                |||||   ||  ||| |||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 19488943 gacgtttccgacgccacgccgccgtccaccacaccgaggcagagagcgccgcccttggtg 19488884

                                                                            
Query: 282      gccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcaccagc 341
                |||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 19488883 gccaccatcgagttcgccccgaacaccacccacgacgtggcctcgctctggaacaccagc 19488824

                                                                            
Query: 342      tccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtagcac 401
                || ||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||
Sbjct: 19488823 tcgaccgtcggcacggccggccccacgcgtgtgcccgccaccttgctcccgtcgtagcac 19488764

                           
Query: 402      agcttgaacgg 412
                |||||||||||
Sbjct: 19488763 agcttgaacgg 19488753



 Score =  281 bits (142), Expect = 9e-73
 Identities = 271/314 (86%)
 Strand = Plus / Minus

                                                                            
Query: 99       ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 158
                |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 19495945 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 19495886

                                                                            
Query: 159      ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 218
                |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 19495885 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 19495826

                                                                            
Query: 219      accgacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 278
                |||||||||  ||||||  |||| || ||||| ||||||| ||||||||||||| |||||
Sbjct: 19495825 accgacgtctccggggctacgcctccatccacaacgccgaagcagagcgcgccgtccttg 19495766

                                                                            
Query: 279      gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 338
                | ||||||||| ||||| ||||||||||||||||||||| |||| | | |||||||||||
Sbjct: 19495765 gtggccaccatagagttcgccccgaacaccacccacgacacggctttgctctgcagcacc 19495706

                                                                            
Query: 339      agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 398
                ||||| || |||||||||||||| ||| ||||||||||||||||| || |||||||||||
Sbjct: 19495705 agctcgacggtcggcacggccggccccgcgcgggtgctccccaccatggtcccgtcgtag 19495646

                              
Query: 399      cacagcttgaacgg 412
                || |||||||||||
Sbjct: 19495645 caaagcttgaacgg 19495632



 Score =  270 bits (136), Expect = 3e-69
 Identities = 211/236 (89%)
 Strand = Plus / Minus

                                                                            
Query: 177      aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 236
                |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 19502928 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 19502869

                                                                            
Query: 237      gcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcggccaccatcgagttg 296
                | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 19502868 gtgccggcgtccaccacgccgaggcagagcgcgcctcccttggtggccaccatcgagttc 19502809

                                                                            
Query: 297      gccccgaacaccacccacgacgcggcctcgttctgcagcaccagctccaccgtcggcacg 356
                ||||||||||| |||||||| ||  ||  | | |||||||||||||| |  |||||||||
Sbjct: 19502808 gccccgaacacaacccacgaggcacccgtgctttgcagcaccagctcgatggtcggcacg 19502749

                                                                        
Query: 357      gccgggcccacgcgggtgctccccaccttgctcccgtcgtagcacagcttgaacgg 412
                ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 19502748 gccggccccacgcgcgtgctccccaccttcctcccgtcgtagcacagcttgaacgg 19502693



 Score =  262 bits (132), Expect = 8e-67
 Identities = 269/314 (85%), Gaps = 3/314 (0%)
 Strand = Plus / Minus

                                                                            
Query: 102      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 161
                ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 19491562 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 19491503

                                                                            
Query: 162      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 221
                | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 19491502 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 19491443

                                                                            
Query: 222      gacgtccg---cggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 278
                || | | |   | | || | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 19491442 gatgacggatacagcgcggggccgccgtccaccacgccaaggcagagcgcgccgcccttg 19491383

                                                                            
Query: 279      gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 338
                |||| |||||||||||| |||||| |||  | ||||||| |||||||  |||||||||||
Sbjct: 19491382 gcgggcaccatcgagtttgccccgtacatgatccacgacacggcctccctctgcagcacc 19491323

                                                                            
Query: 339      agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 398
                ||||| | ||||||||| || || ||| ||||||||||||| || |||| ||||||||||
Sbjct: 19491322 agctcaatcgtcggcaccgctggccccgcgcgggtgctccctactttgcgcccgtcgtag 19491263

                              
Query: 399      cacagcttgaacgg 412
                ||||||| ||||||
Sbjct: 19491262 cacagctcgaacgg 19491249
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>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full
            insert sequence
          Length = 1474

 Score =  347 bits (175), Expect = 2e-92
 Identities = 277/311 (89%)
 Strand = Plus / Minus

                                                                        
Query: 102  aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 161
            ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 1343 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 1284

                                                                        
Query: 162  gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 221
            |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 1283 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 1224

                                                                        
Query: 222  gacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcg 281
            |||||   ||  ||| |||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 1223 gacgtttccgacgccacgccgccgtccaccacaccgaggcagagagcgccgcccttggtg 1164

                                                                        
Query: 282  gccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcaccagc 341
            |||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 1163 gccaccatcgagttcgccccgaacaccacccacgacgtggcctcgctctggaacaccagc 1104

                                                                        
Query: 342  tccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtagcac 401
            || ||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||
Sbjct: 1103 tcgaccgtcggcacggccggccccacgcgtgtgcccgccaccttgctcccgtcgtagcac 1044

                       
Query: 402  agcttgaacgg 412
            |||||||||||
Sbjct: 1043 agcttgaacgg 1033
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>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full
            insert sequence
          Length = 1741

 Score =  270 bits (136), Expect = 3e-69
 Identities = 211/236 (89%)
 Strand = Plus / Minus

                                                                        
Query: 177  aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 236
            |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 1519 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 1460

                                                                        
Query: 237  gcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcggccaccatcgagttg 296
            | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 1459 gtgccggcgtccaccacgccgaggcagagcgcgcctcccttggtggccaccatcgagttc 1400

                                                                        
Query: 297  gccccgaacaccacccacgacgcggcctcgttctgcagcaccagctccaccgtcggcacg 356
            ||||||||||| |||||||| ||  ||  | | |||||||||||||| |  |||||||||
Sbjct: 1399 gccccgaacacaacccacgaggcacccgtgctttgcagcaccagctcgatggtcggcacg 1340

                                                                    
Query: 357  gccgggcccacgcgggtgctccccaccttgctcccgtcgtagcacagcttgaacgg 412
            ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1339 gccggccccacgcgcgtgctccccaccttcctcccgtcgtagcacagcttgaacgg 1284
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                            
Query: 174      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 233
                |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 15506035 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 15505976

                                                         
Query: 234      gccgcgccgccgtccaccacgccgaggcagagcgcgccgcc 274
                ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 15505975 gccgctccgccgtccaccacggcgaggcagagcgccccgcc 15505935



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 373      tgctccccaccttgctcccgtcgtagcacagcttgaacgg 412
                ||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 15505815 tgctctccaccttgctcccgtcgtagcacagctcgaacgg 15505776
to top
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                         
Query: 174   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 233
             |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 26890 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 26831

                                                      
Query: 234   gccgcgccgccgtccaccacgccgaggcagagcgcgccgcc 274
             ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 26830 gccgctccgccgtccaccacggcgaggcagagcgccccgcc 26790



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 373   tgctccccaccttgctcccgtcgtagcacagcttgaacgg 412
             ||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 26670 tgctctccaccttgctcccgtcgtagcacagctcgaacgg 26631
to top
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                          
Query: 174    tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 233
              |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 155327 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 155268

                                                       
Query: 234    gccgcgccgccgtccaccacgccgaggcagagcgcgccgcc 274
              ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 155267 gccgctccgccgtccaccacggcgaggcagagcgccccgcc 155227



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                      
Query: 373    tgctccccaccttgctcccgtcgtagcacagcttgaacgg 412
              ||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 155107 tgctctccaccttgctcccgtcgtagcacagctcgaacgg 155068
to top
>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 174  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 222
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1181 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1133
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 174      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 222
                |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 41126162 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 41126210



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 248     caccacgccgaggcagagcgc 268
               |||||||||||||||||||||
Sbjct: 2776452 caccacgccgaggcagagcgc 2776432



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 390      ccgtcgtagcacagcttgaa 409
                ||||||||||||||||||||
Sbjct: 41169747 ccgtcgtagcacagcttgaa 41169728



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 329      ctgcagcaccagctccaccg 348
                ||||||||||||||||||||
Sbjct: 36231887 ctgcagcaccagctccaccg 36231868



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     caccacgccgaggcagagcg 267
               ||||||||||||||||||||
Sbjct: 2782536 caccacgccgaggcagagcg 2782517
to top
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 174   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 222
             |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 23217 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 23265



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   ccgtcgtagcacagcttgaa 409
             ||||||||||||||||||||
Sbjct: 66802 ccgtcgtagcacagcttgaa 66783
to top
>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
            insert sequence
          Length = 1405

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 174  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 222
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1102 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1054
to top
>gb|DQ485150.1| Burkholderia cepacia MPS gene, partial sequence
          Length = 1811

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 215  caccaccgacgtccgcggggccgcgcc 241
            ||||||||||||||||||| |||||||
Sbjct: 1638 caccaccgacgtccgcgggtccgcgcc 1664
to top
>gb|AF185273.1|AF185273 Burkholderia cepacia unknown sequence
          Length = 2351

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 215  caccaccgacgtccgcggggccgcgcc 241
            ||||||||||||||||||| |||||||
Sbjct: 1758 caccaccgacgtccgcgggtccgcgcc 1784
to top
>ref|XM_550168.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 248 caccacgccgaggcagagcgc 268
           |||||||||||||||||||||
Sbjct: 481 caccacgccgaggcagagcgc 461
to top
>ref|XM_476345.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1752

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  gttctgcagcaccagctccaccgtc 350
            |||||||||||||| ||||||||||
Sbjct: 1419 gttctgcagcaccacctccaccgtc 1395
to top
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence
          Length = 179409

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 256   cgaggcagagcgcgccgccct 276
             |||||||||||||||||||||
Sbjct: 52859 cgaggcagagcgcgccgccct 52879
to top
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence
          Length = 147345

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 256    cgaggcagagcgcgccgccct 276
              |||||||||||||||||||||
Sbjct: 132948 cgaggcagagcgcgccgccct 132928
to top
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   ccgtcggcacggccgggccca 366
             |||||||||||||||||||||
Sbjct: 83009 ccgtcggcacggccgggccca 83029
to top
>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome
          Length = 10886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 264  agcgcgccgcccttggcggccacca 288
            ||||||||||||||||||| |||||
Sbjct: 9834 agcgcgccgcccttggcggtcacca 9858
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 326     gttctgcagcaccagctccaccgtc 350
               |||||||||||||| ||||||||||
Sbjct: 9075077 gttctgcagcaccatctccaccgtc 9075053



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 326     gttctgcagcaccagctccaccgtc 350
               |||||||||||||| ||||||||||
Sbjct: 8873317 gttctgcagcaccatctccaccgtc 8873293
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 326   gttctgcagcaccagctccaccgtc 350
             |||||||||||||| ||||||||||
Sbjct: 58153 gttctgcagcaccacctccaccgtc 58177



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     cgccgaggcagagcgcgccg 272
               ||||||||||||||||||||
Sbjct: 7441037 cgccgaggcagagcgcgccg 7441056
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 237      gcgccgccgtccaccacgccg 257
                |||||||||||||||||||||
Sbjct: 20175099 gcgccgccgtccaccacgccg 20175079
to top
>gb|AC010002.6|AC010002 Homo sapiens chromosome 7 clone RP11-194N22, complete sequence
          Length = 169921

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 256    cgaggcagagcgcgccgccct 276
              |||||||||||||||||||||
Sbjct: 150167 cgaggcagagcgcgccgccct 150147
to top
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0007G12
          Length = 111819

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   gcgccgccgtccaccacgccg 257
             |||||||||||||||||||||
Sbjct: 41099 gcgccgccgtccaccacgccg 41079
to top
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0009G03
          Length = 163526

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 248   caccacgccgaggcagagcgc 268
             |||||||||||||||||||||
Sbjct: 82129 caccacgccgaggcagagcgc 82109



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   caccacgccgaggcagagcg 267
             ||||||||||||||||||||
Sbjct: 88213 caccacgccgaggcagagcg 88194
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 326   gttctgcagcaccagctccaccgtc 350
             |||||||||||||| ||||||||||
Sbjct: 57452 gttctgcagcaccacctccaccgtc 57476
to top
>dbj|AK120703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170P19, full
           insert sequence
          Length = 2394

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 248 caccacgccgaggcagagcgc 268
           |||||||||||||||||||||
Sbjct: 481 caccacgccgaggcagagcgc 461
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 264     agcgcgccgcccttggcggccacca 288
               ||||||||||||| |||||||||||
Sbjct: 3289353 agcgcgccgccctgggcggccacca 3289377
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 326     gttctgcagcaccagctccaccgtc 350
               |||||||||||||| ||||||||||
Sbjct: 9074962 gttctgcagcaccatctccaccgtc 9074938



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 326     gttctgcagcaccagctccaccgtc 350
               |||||||||||||| ||||||||||
Sbjct: 8873200 gttctgcagcaccatctccaccgtc 8873176
to top
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151176

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 326   gttctgcagcaccagctccaccgtc 350
             |||||||||||||| ||||||||||
Sbjct: 61946 gttctgcagcaccatctccaccgtc 61922
to top
>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103007

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 326   gttctgcagcaccagctccaccgtc 350
             |||||||||||||| ||||||||||
Sbjct: 43016 gttctgcagcaccatctccaccgtc 43040
to top
>ref|XM_550169.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 caccacgccgaggcagagcg 267
           ||||||||||||||||||||
Sbjct: 348 caccacgccgaggcagagcg 329
to top
>ref|NM_190569.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  ctgcagcaccagctccaccg 348
            ||||||||||||||||||||
Sbjct: 1362 ctgcagcaccagctccaccg 1343
to top
>ref|NM_190078.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 ccgtcgtagcacagcttgaa 409
           ||||||||||||||||||||
Sbjct: 998 ccgtcgtagcacagcttgaa 979
to top
>ref|NM_186687.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3015

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 cgccgaggcagagcgcgccg 272
           ||||||||||||||||||||
Sbjct: 571 cgccgaggcagagcgcgccg 552
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    cgaacaccacccacgacgcg 320
              ||||||||||||||||||||
Sbjct: 400431 cgaacaccacccacgacgcg 400412
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     cgaacaccacccacgacgcg 320
               ||||||||||||||||||||
Sbjct: 1131154 cgaacaccacccacgacgcg 1131135
to top
>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gcaagcacacatatcatctt 59
             ||||||||||||||||||||
Sbjct: 56902 gcaagcacacatatcatctt 56921
to top
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence
          Length = 209936

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     acccaaggcggaagttgttgcagg 120
              ||||||||| ||||||||||||||
Sbjct: 191105 acccaaggctgaagttgttgcagg 191128
to top
>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cagggaggagctgaacccga 156
             ||||||||||||||||||||
Sbjct: 38983 cagggaggagctgaacccga 38964
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     cgaacaccacccacgacgcg 320
               ||||||||||||||||||||
Sbjct: 1012114 cgaacaccacccacgacgcg 1012095
to top
>gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
           beta, mRNA (cDNA clone MGC:87711 IMAGE:30331962),
           complete cds
          Length = 3745

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 166 gctgcagatcgaactccagcaggt 189
           |||||||| |||||||||||||||
Sbjct: 317 gctgcagagcgaactccagcaggt 294
to top
>dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH3031660, highly  similar
           to cAMP-dependent protein kinase type II-beta regulatory
           chain
          Length = 3470

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 166 gctgcagatcgaactccagcaggt 189
           |||||||| |||||||||||||||
Sbjct: 127 gctgcagagcgaactccagcaggt 104
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    ctgcagcaccagctccaccg 348
              ||||||||||||||||||||
Sbjct: 114161 ctgcagcaccagctccaccg 114142
to top
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406G08
          Length = 144233

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    ctgcagcaccagctccaccg 348
              ||||||||||||||||||||
Sbjct: 108900 ctgcagcaccagctccaccg 108881
to top
>gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23G24, complete
             sequence
          Length = 197264

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 332   cagcaccagctccaccgtcggcac 355
             |||||||||||||||| |||||||
Sbjct: 18955 cagcaccagctccaccatcggcac 18932
to top
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0061L20
          Length = 138926

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   cgccgaggcagagcgcgccg 272
             ||||||||||||||||||||
Sbjct: 19351 cgccgaggcagagcgcgccg 19370
to top
>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    acccaaggcggaagttgttgcagg 120
             ||||||||| ||||||||||||||
Sbjct: 12934 acccaaggctgaagttgttgcagg 12957
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 338     cagctccaccgtcggcacggccgg 361
               ||||||||||||||||||| ||||
Sbjct: 2063641 cagctccaccgtcggcacgtccgg 2063664
to top
>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   actccagcaggttgtcctcc 197
             ||||||||||||||||||||
Sbjct: 28862 actccagcaggttgtcctcc 28881


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,400,342
Number of Sequences: 3902068
Number of extensions: 3400342
Number of successful extensions: 79770
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78581
Number of HSP's gapped (non-prelim): 1180
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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