| Clone Name | rbaet40c06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1... | 39 | 0.004 | 2 | SC5A1_MOUSE (Q8C3K6) Sodium/glucose cotransporter 1 (Na(+)/gluco... | 28 | 7.9 |
|---|
>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)| Length = 291 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/44 (45%), Positives = 22/44 (50%) Frame = -3 Query: 282 SSGPAFTKSDVSTXXXXXXXXXXXXXXXXXXXAGYLYEASKRSK 151 SSGPA TKSD+ST YLYEASK+SK Sbjct: 248 SSGPASTKSDLSTGAVLAQSAVGVAVAAAVVIVSYLYEASKKSK 291
>SC5A1_MOUSE (Q8C3K6) Sodium/glucose cotransporter 1 (Na(+)/glucose| cotransporter 1) (High affinity sodium-glucose cotransporter) Length = 665 Score = 27.7 bits (60), Expect = 7.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +3 Query: 3 PQECMKYFETTVGCSSLEF 59 P+EC KY T VGC+++ + Sbjct: 348 PEECQKYCGTPVGCTNIAY 366 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,760,119 Number of Sequences: 219361 Number of extensions: 435169 Number of successful extensions: 832 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 826 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 832 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)