>ref|NM_193035.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1422

 Score =  210 bits (106), Expect = 2e-51
 Identities = 169/190 (88%)
 Strand = Plus / Minus

                                                                        
Query: 179  gccagggcctcggccgccctcctcccagacaccatcgcgccgtcgaacgtggcggagcac 238
            ||||| || |||||||| |||||||| ||||||| ||||||||||||||| ||| |||||
Sbjct: 1394 gccagagcttcggccgctctcctcccggacaccagcgcgccgtcgaacgtcgcgtagcac 1335

                                                                        
Query: 239  cagtggtccccgcacacgtacacgccgtcgccgaccctggggtcccgccccgctggctcc 298
            |||||||| ||||||| |||||  |||||||||||||| ||||| |||||||| |||   
Sbjct: 1334 cagtggtcgccgcacatgtacagcccgtcgccgaccctcgggtcgcgccccgccggcgaa 1275

                                                                        
Query: 299  gtgggcggcgtctggtccggctgcgcgaagccgatgcggtacgtccgcaggtgcgcccac 358
            || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1274 gtcggcggcgtctggtccggctgcgcgaagccgatgcggtacgtcctcaggtgcgtccac 1215

                      
Query: 359  gacgccacct 368
            ||||| ||||
Sbjct: 1214 gacgcgacct 1205

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  210 bits (106), Expect = 2e-51
 Identities = 169/190 (88%)
 Strand = Plus / Plus

                                                                            
Query: 179      gccagggcctcggccgccctcctcccagacaccatcgcgccgtcgaacgtggcggagcac 238
                ||||| || |||||||| |||||||| ||||||| ||||||||||||||| ||| |||||
Sbjct: 25912667 gccagagcttcggccgctctcctcccggacaccagcgcgccgtcgaacgtcgcgtagcac 25912726

                                                                            
Query: 239      cagtggtccccgcacacgtacacgccgtcgccgaccctggggtcccgccccgctggctcc 298
                |||||||| ||||||| |||||  |||||||||||||| ||||| |||||||| |||   
Sbjct: 25912727 cagtggtcgccgcacatgtacagcccgtcgccgaccctcgggtcgcgccccgccggcgaa 25912786

                                                                            
Query: 299      gtgggcggcgtctggtccggctgcgcgaagccgatgcggtacgtccgcaggtgcgcccac 358
                || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 25912787 gtcggcggcgtctggtccggctgcgcgaagccgatgcggtacgtcctcaggtgcgtccac 25912846

                          
Query: 359      gacgccacct 368
                ||||| ||||
Sbjct: 25912847 gacgcgacct 25912856

>dbj|AK066185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056F23, full
            insert sequence
          Length = 1313

 Score =  210 bits (106), Expect = 2e-51
 Identities = 169/190 (88%)
 Strand = Plus / Minus

                                                                        
Query: 179  gccagggcctcggccgccctcctcccagacaccatcgcgccgtcgaacgtggcggagcac 238
            ||||| || |||||||| |||||||| ||||||| ||||||||||||||| ||| |||||
Sbjct: 1166 gccagagcttcggccgctctcctcccggacaccagcgcgccgtcgaacgtcgcgtagcac 1107

                                                                        
Query: 239  cagtggtccccgcacacgtacacgccgtcgccgaccctggggtcccgccccgctggctcc 298
            |||||||| ||||||| |||||  |||||||||||||| ||||| |||||||| |||   
Sbjct: 1106 cagtggtcgccgcacatgtacagcccgtcgccgaccctcgggtcgcgccccgccggcgaa 1047

                                                                        
Query: 299  gtgggcggcgtctggtccggctgcgcgaagccgatgcggtacgtccgcaggtgcgcccac 358
            || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1046 gtcggcggcgtctggtccggctgcgcgaagccgatgcggtacgtcctcaggtgcgtccac 987

                      
Query: 359  gacgccacct 368
            ||||| ||||
Sbjct: 986  gacgcgacct 977

>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1339_F05
          Length = 132708

 Score =  210 bits (106), Expect = 2e-51
 Identities = 169/190 (88%)
 Strand = Plus / Plus

                                                                         
Query: 179   gccagggcctcggccgccctcctcccagacaccatcgcgccgtcgaacgtggcggagcac 238
             ||||| || |||||||| |||||||| ||||||| ||||||||||||||| ||| |||||
Sbjct: 83115 gccagagcttcggccgctctcctcccggacaccagcgcgccgtcgaacgtcgcgtagcac 83174

                                                                         
Query: 239   cagtggtccccgcacacgtacacgccgtcgccgaccctggggtcccgccccgctggctcc 298
             |||||||| ||||||| |||||  |||||||||||||| ||||| |||||||| |||   
Sbjct: 83175 cagtggtcgccgcacatgtacagcccgtcgccgaccctcgggtcgcgccccgccggcgaa 83234

                                                                         
Query: 299   gtgggcggcgtctggtccggctgcgcgaagccgatgcggtacgtccgcaggtgcgcccac 358
             || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 83235 gtcggcggcgtctggtccggctgcgcgaagccgatgcggtacgtcctcaggtgcgtccac 83294

                       
Query: 359   gacgccacct 368
             ||||| ||||
Sbjct: 83295 gacgcgacct 83304

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 178     ggccagggcctcggccgccct 198
               |||||||||||||||||||||
Sbjct: 2258117 ggccagggcctcggccgccct 2258137

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    ggccagggcctcggccgccct 198
              |||||||||||||||||||||
Sbjct: 706576 ggccagggcctcggccgccct 706596

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   tccggctgcgcgaagccgatg 334
             |||||||||||||||||||||
Sbjct: 46446 tccggctgcgcgaagccgatg 46466

>emb|AL035696.14|HS416J7 Human DNA sequence from clone RP3-416J7 on chromosome 6p25 Contains a
             novel pseudogene, parts of 2 novel genes and a CpG island,
             complete sequence
          Length = 124034

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   cagccccccatcattggcca 182
             ||||||||||||||||||||
Sbjct: 36176 cagccccccatcattggcca 36157

>emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 on chromosome 6q24 Contains
            the 3' end of a variant of the EPM2A gene for progressive
            myoclonus type 2 epilepsy (Lafora disease) protein
            (laforin) and a BTB/POZ domain zinc finger protein
            pseudogene, complete sequence
          Length = 115835

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   gacgtgccttttgccttgca 95
            ||||||||||||||||||||
Sbjct: 8149 gacgtgccttttgccttgca 8130

>emb|AJ001045.2|BEPAT1 Blastocladiella emersonii PAT1 gene for P-type cation-transporting
            ATPase
          Length = 3747

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  acacgtacacgccgtcgccg 271
            ||||||||||||||||||||
Sbjct: 2276 acacgtacacgccgtcgccg 2257

>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   gcctcggccgccctcctccc 204
             ||||||||||||||||||||
Sbjct: 67749 gcctcggccgccctcctccc 67730

>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    gcctcggccgccctcctccc 204
              ||||||||||||||||||||
Sbjct: 322985 gcctcggccgccctcctccc 322966

>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gcctcggccgccctcctccc 204
              ||||||||||||||||||||
Sbjct: 254846 gcctcggccgccctcctccc 254865

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    ggccagggcctcggccgccc 197
              ||||||||||||||||||||
Sbjct: 317238 ggccagggcctcggccgccc 317219

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 179     gccagggcctcggccgccctcctc 202
               ||||| ||||||||||||||||||
Sbjct: 3198904 gccagcgcctcggccgccctcctc 3198881

>gb|AF205944.1|AF205944 Blastocladiella emersonii P-Type cation-transporting ATPase (PAT2)
            gene, complete cds
          Length = 4736

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  acacgtacacgccgtcgccg 271
            ||||||||||||||||||||
Sbjct: 2387 acacgtacacgccgtcgccg 2368

>gb|AC004842.2|AC004842 Homo sapiens PAC clone RP4-609N19 from 7p22, complete sequence
          Length = 120000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   cagccccccatcattggcca 182
             ||||||||||||||||||||
Sbjct: 21720 cagccccccatcattggcca 21739

>gb|AC129307.5| Mus musculus BAC clone RP24-200K10 from chromosome 8, complete sequence
          Length = 200660

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    acagtaaaaacaatggaaat 120
              ||||||||||||||||||||
Sbjct: 174547 acagtaaaaacaatggaaat 174566

>gb|AC102250.10| Mus musculus chromosome 18, clone RP24-162I6, complete sequence
          Length = 185297

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   aacagtaaaaacaatggaaa 119
             ||||||||||||||||||||
Sbjct: 52455 aacagtaaaaacaatggaaa 52436

>emb|AL929347.8| Human DNA sequence from clone RP3-433O3 on chromosome 22, complete
              sequence
          Length = 128374

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cagccccccatcattggcca 182
              ||||||||||||||||||||
Sbjct: 106978 cagccccccatcattggcca 106959

>gb|AC145211.3| Mus musculus BAC clone RP23-419G4 from 8, complete sequence
          Length = 191166

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   acagtaaaaacaatggaaat 120
             ||||||||||||||||||||
Sbjct: 41506 acagtaaaaacaatggaaat 41525

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     tctggtccggctgcgcgaag 328
               ||||||||||||||||||||
Sbjct: 2431690 tctggtccggctgcgcgaag 2431709


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,885,777
Number of Sequences: 3902068
Number of extensions: 2885777
Number of successful extensions: 55550
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55118
Number of HSP's gapped (non-prelim): 432
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)