ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet39h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) ... 82 2e-12
2gb|AY110922.1| Zea mays CL24029_1 mRNA sequence 76 1e-10
3gb|AY641407.1| Hordeum vulgare subsp. vulgare nonfunctional Muta... 74 4e-10
4gb|AY641406.1| Hordeum vulgare subsp. vulgare putative NBS-LRR p... 74 4e-10
5gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
8dbj|AK059833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
9dbj|AK058318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
12emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial se... 62 2e-06
13emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136... 62 2e-06
14emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 62 2e-06
15emb|Z83236.1|CEK10H10 Caenorhabditis elegans Cosmid K10H10, comp... 46 0.097
16ref|NM_064606.3| Caenorhabditis elegans K10H10.1 (K10H10.1) mRNA... 46 0.097
17emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 i... 46 0.097
18ref|NM_001008000.1| Xenopus tropicalis cpne3 protein (cpne3), mRNA 44 0.38
19gb|BC080879.1| Xenopus tropicalis cpne3 protein, mRNA (cDNA clon... 44 0.38
20emb|AL391840.6| Human DNA sequence from clone RP11-342L8 on chro... 44 0.38
21gb|AC084601.1|CBRG43I20 Caenorhabditis briggsae cosmid G43I20, c... 44 0.38
22gb|AC012155.17|AC012155 Homo sapiens 6 BAC RP11-114J19 (Roswell ... 44 0.38
23ref|NM_119042.3| Arabidopsis thaliana CAK1AT (CDK-ACTIVATING KIN... 42 1.5
24ref|NM_179137.2| Arabidopsis thaliana CAK1AT (CDK-ACTIVATING KIN... 42 1.5
25gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 42 1.5
26gb|AC147633.3| Mus musculus BAC clone RP23-302B3 from chromosome... 42 1.5
27gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cd... 42 1.5
28gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 42 1.5
29emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 42 1.5
30emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B... 42 1.5
31emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B... 42 1.5
32gb|AC090816.3| Homo sapiens chromosome 8, clone CTC-386L14, comp... 42 1.5
33gb|AY042816.1| Arabidopsis thaliana Cdk-activating kinase CAK1At... 42 1.5
34tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 42 1.5
35emb|BX828327.1|CNS0A32W Arabidopsis thaliana Full-length cDNA Co... 42 1.5
36dbj|AB009399.1| Arabidopsis thaliana mRNA for Cdk-activating kin... 42 1.5
37gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O1... 40 6.0
38gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, co... 40 6.0
39gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 6.0
40gb|AC113092.25| Mus musculus chromosome 6, clone RP23-309N11, co... 40 6.0
41gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 6.0
42gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 6.0
43ref|XM_956995.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
44gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 6.0
45ref|XM_328660.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
46gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosom... 40 6.0
47gb|AC183679.3| Pan troglodytes BAC clone CH251-400O3 from chromo... 40 6.0
48ref|XM_750567.1| Aspergillus fumigatus Af293 alcohol dehydrogena... 40 6.0
49emb|Z70206.1|CEC49F8 Caenorhabditis elegans Cosmid C49F8, comple... 40 6.0
50gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, comple... 40 6.0
51ref|XM_647050.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.0
52gb|AC073884.4| Homo sapiens BAC clone CTD-2006F7 from 7, complet... 40 6.0
53gb|CP000001.1| Bacillus cereus E33L, complete genome 40 6.0
54emb|AL591519.5| Human DNA sequence from clone RP11-160E20 on chr... 40 6.0
55emb|AL591473.3| Human DNA sequence from clone RP11-256G5 on chro... 40 6.0
56emb|AL445427.23| Human DNA sequence from clone RP5-1091A7 on chr... 40 6.0
57emb|AL391992.8| Human DNA sequence from clone RP11-2N7 on chromo... 40 6.0
58emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C... 40 6.0
59emb|X87834.1|ECPLCKAIL E.coli plasmid cka, cki and ckl genes 40 6.0
60gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosom... 40 6.0
61emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.0
62emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
63emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
64gb|AC160756.7| Mus musculus chromosome 15, clone RP23-158H4, com... 40 6.0
65emb|AL731860.8| Mouse DNA sequence from clone RP23-367H4 on chro... 40 6.0
66emb|BX119926.20| Zebrafish DNA sequence from clone CH211-42C8 in... 40 6.0
67emb|CR385064.7| Zebrafish DNA sequence from clone CH211-236H18 i... 40 6.0
68dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 6.0
69gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can... 40 6.0
70gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Canc... 40 6.0
71gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, com... 40 6.0
72gb|AC147961.3| Medicago truncatula chromosome 7 BAC clone mth2-3... 40 6.0
73emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 i... 40 6.0
74ref|NM_001028362.1| Caenorhabditis elegans Y57G11C.49 (Y57G11C.4... 40 6.0
75gb|AC084213.19|AC084213 Mus musculus 1 BAC RP23-470F8 (Roswell P... 40 6.0
76gb|AC157375.2| Medicago truncatula chromosome 2 BAC clone mth2-5... 40 6.0
77gb|BC085493.1| Mus musculus ribosomal protein L13, mRNA (cDNA cl... 40 6.0
78gb|AC068665.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.0
79gb|AF492632.1| Capsicum annuum putative pectate-lyase (upa8) mRN... 40 6.0
80gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosom... 40 6.0
81gb|AY929248.1| Escherichia coli plasmid pColK-K235, complete seq... 40 6.0
82emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, compl... 40 6.0
83gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6 40 6.0
84gb|AF144402.1|AF144402 Allium senescens 5S ribosomal RNA gene, p... 40 6.0
85emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p1... 40 6.0
86gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 6.0
87emb|CT025623.13| Mouse DNA sequence from clone RP23-397E11 on ch... 40 6.0
88gb|AC138111.3| Mus musculus BAC clone RP24-262B6 from 1, complet... 40 6.0
89emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on ch... 40 6.0
90gb|U27452.1|ECU27452 Escherichia coli plasmid pColK-K235 colicin... 40 6.0
91gb|M63166.1|ATHMERI5G Arabidopsis thaliana meri-5 gene, complete... 40 6.0 
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene,
           complete cds
          Length = 15688

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 16  tgactattgataccaatcggttacatggtgcccaagtgtggtaatgccctgcaatta 72
           ||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 527 tgactatttgtaccaatccgttacatggtgcccaagtgtggtagtgccctgcaatta 583
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>gb|AY110922.1| Zea mays CL24029_1 mRNA sequence
          Length = 652

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 390 aaagacggcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
           ||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 257 aaagagggcacagtgacaacagctccagtttccagggttgcaggctttgttcct 310
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>gb|AY641407.1| Hordeum vulgare subsp. vulgare nonfunctional Mutator-like transposase
            gene, complete sequence
          Length = 10100

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 16   tgactattgataccaatcggttacatggtgcccaagtgtggtaatgccctgcaatta 72
            ||||||||| |||||||| ||||||||||| |||||||||||| |||| ||||||||
Sbjct: 4176 tgactattggtaccaatcagttacatggtgaccaagtgtggtagtgccttgcaatta 4120
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>gb|AY641406.1| Hordeum vulgare subsp. vulgare putative NBS-LRR protein-like gene,
            complete sequence
          Length = 3944

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 16   tgactattgataccaatcggttacatggtgcccaagtgtggtaatgccctgcaatta 72
            ||||||||  |||||||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 3415 tgactatttgtaccaatccgttacatggtgcccaagtgtggtagtgccctacaatta 3359
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>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0004B05, complete sequence
          Length = 121223

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                         
Query: 337   tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
             |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 14259 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 14200

                                                            
Query: 397   gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
             ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 14199 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 14153
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                          
Query: 337    tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
              |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 778438 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 778379

                                                             
Query: 397    gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
              ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 778378 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 778332
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                          
Query: 337    tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
              |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 735967 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 735908

                                                             
Query: 397    gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
              ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 735907 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 735861
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>dbj|AK059833.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B05, full
           insert sequence
          Length = 946

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 337 tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
           |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 725 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 666

                                                          
Query: 397 gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
           ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 665 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 619
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>dbj|AK058318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A09, full
           insert sequence
          Length = 920

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 337 tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
           |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 717 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 658

                                                          
Query: 397 gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
           ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 657 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 611
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                          
Query: 337    tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
              |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 735968 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 735909

                                                             
Query: 397    gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
              ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 735908 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 735862
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                          
Query: 337    tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
              |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 778438 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 778379

                                                             
Query: 397    gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
              ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 778378 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 778332
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>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC
           OSJNBb0006G23 of library OSJNBb from chromosome 12 of
           cultivar Nipponbare of ssp. japonica of Oryza sativa
           (rice), complete sequence
          Length = 12281

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 337 tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
           |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 210 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 151

                                                          
Query: 397 gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
           ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 150 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 104
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>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 118211

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                       
Query: 337 tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
           |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 696 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 755

                                                          
Query: 397 gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
           ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 756 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 802
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                        
Query: 337  tcatatactgcccggttctcgagtcaattaggacatcgtcgcctacatcaacgaaagacg 396
            |||||||||| || ||||| || ||||| |||| ||| |||||||| |  || || || |
Sbjct: 7005 tcatatactggccagttcttgaatcaatcaggatatcatcgcctacgttcacaaacgagg 7064

                                                           
Query: 397  gcacattgacaacagctcctgtttccagagttgcaggctttgttcct 443
            ||||  |||||||||||||||||||||  ||||| || |||||||||
Sbjct: 7065 gcactgtgacaacagctcctgtttccacggttgctggttttgttcct 7111
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>emb|Z83236.1|CEK10H10 Caenorhabditis elegans Cosmid K10H10, complete sequence
          Length = 30033

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 211  aaatgagaagaagaagaaaagac 233
            |||||||||||||||||||||||
Sbjct: 4238 aaatgagaagaagaagaaaagac 4216
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>ref|NM_064606.3| Caenorhabditis elegans K10H10.1 (K10H10.1) mRNA, complete cds
          Length = 1654

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 211  aaatgagaagaagaagaaaagac 233
            |||||||||||||||||||||||
Sbjct: 1487 aaatgagaagaagaagaaaagac 1465
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>emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 in linkage group 17,
              complete sequence
          Length = 181677

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 213    atgagaagaagaagaaaagacattgtt 239
              |||||||||||||||||| ||||||||
Sbjct: 124701 atgagaagaagaagaaaaaacattgtt 124727
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>ref|NM_001008000.1| Xenopus tropicalis cpne3 protein (cpne3), mRNA
          Length = 1855

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 209 ataaatgagaagaagaagaaaa 230
           ||||||||||||||||||||||
Sbjct: 810 ataaatgagaagaagaagaaaa 831
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>gb|BC080879.1| Xenopus tropicalis cpne3 protein, mRNA (cDNA clone MGC:79464
           IMAGE:5382901), complete cds
          Length = 1855

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 209 ataaatgagaagaagaagaaaa 230
           ||||||||||||||||||||||
Sbjct: 810 ataaatgagaagaagaagaaaa 831
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>emb|AL391840.6| Human DNA sequence from clone RP11-342L8 on chromosome 6 Contains a
             gene for a novel protein and a CpG island, complete
             sequence
          Length = 109737

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 211   aaatgagaagaagaagaaaaga 232
             ||||||||||||||||||||||
Sbjct: 14906 aaatgagaagaagaagaaaaga 14885
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>gb|AC084601.1|CBRG43I20 Caenorhabditis briggsae cosmid G43I20, complete sequence
          Length = 41510

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 209 ataaatgagaagaagaagaaaa 230
           ||||||||||||||||||||||
Sbjct: 445 ataaatgagaagaagaagaaaa 466
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>gb|AC012155.17|AC012155 Homo sapiens 6 BAC RP11-114J19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174285

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 211   aaatgagaagaagaagaaaaga 232
             ||||||||||||||||||||||
Sbjct: 62720 aaatgagaagaagaagaaaaga 62741
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>ref|NM_119042.3| Arabidopsis thaliana CAK1AT (CDK-ACTIVATING KINASE 1AT); kinase
            AT4G28980 (CAK1AT) transcript variant AT4G28980.1 mRNA,
            complete cds
          Length = 1748

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aacaagaaaactagctcttca 298
            |||||||||||||||||||||
Sbjct: 1672 aacaagaaaactagctcttca 1652
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>ref|NM_179137.2| Arabidopsis thaliana CAK1AT (CDK-ACTIVATING KINASE 1AT); kinase
            AT4G28980 (CAK1AT) transcript variant AT4G28980.2 mRNA,
            complete cds
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aacaagaaaactagctcttca 298
            |||||||||||||||||||||
Sbjct: 1994 aacaagaaaactagctcttca 1974
to top
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
              sequence
          Length = 252420

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 211    aaatgagaagaagaagaaaag 231
              |||||||||||||||||||||
Sbjct: 180399 aaatgagaagaagaagaaaag 180419
to top
>gb|AC147633.3| Mus musculus BAC clone RP23-302B3 from chromosome 13, complete sequence
          Length = 218640

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    tgtcagctcagctcaaggaga 145
              |||||||||||||||||||||
Sbjct: 133584 tgtcagctcagctcaaggaga 133604
to top
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    ccagtttgataaatgagaaga 221
              |||||||||||||||||||||
Sbjct: 131683 ccagtttgataaatgagaaga 131663
to top
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 411     gctcctgtttccagagttgcaggctttgttcct 443
               |||||||||||||   |||||||||||||||||
Sbjct: 1320871 gctcctgtttccaagattgcaggctttgttcct 1320839
to top
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   aacaagaaaactagctcttca 298
             |||||||||||||||||||||
Sbjct: 18704 aacaagaaaactagctcttca 18684
to top
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   aacaagaaaactagctcttca 298
             |||||||||||||||||||||
Sbjct: 43735 aacaagaaaactagctcttca 43715
to top
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA
            project)
          Length = 101679

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aacaagaaaactagctcttca 298
            |||||||||||||||||||||
Sbjct: 2231 aacaagaaaactagctcttca 2211
to top
>gb|AC090816.3| Homo sapiens chromosome 8, clone CTC-386L14, complete sequence
          Length = 126761

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   ccagtttgataaatgagaaga 221
             |||||||||||||||||||||
Sbjct: 94421 ccagtttgataaatgagaaga 94401
to top
>gb|AY042816.1| Arabidopsis thaliana Cdk-activating kinase CAK1At (F19B15.10) mRNA,
            complete cds
          Length = 1736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aacaagaaaactagctcttca 298
            |||||||||||||||||||||
Sbjct: 1663 aacaagaaaactagctcttca 1643
to top
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene,
              alternatively spliced, complete cds
          Length = 1421559

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    ccagtttgataaatgagaaga 221
              |||||||||||||||||||||
Sbjct: 131683 ccagtttgataaatgagaaga 131663
to top
>emb|BX828327.1|CNS0A32W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH77ZA10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1699

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aacaagaaaactagctcttca 298
            |||||||||||||||||||||
Sbjct: 1672 aacaagaaaactagctcttca 1652
to top
>dbj|AB009399.1| Arabidopsis thaliana mRNA for Cdk-activating kinase 1At, complete cds
          Length = 1742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aacaagaaaactagctcttca 298
            |||||||||||||||||||||
Sbjct: 1666 aacaagaaaactagctcttca 1646
to top
>gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O16, complete sequence
          Length = 161249

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    aaatgagaagaagaagaaaa 230
              ||||||||||||||||||||
Sbjct: 116589 aaatgagaagaagaagaaaa 116570
to top
>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence
          Length = 225524

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    agaagaagaagaaaagacat 235
              ||||||||||||||||||||
Sbjct: 199323 agaagaagaagaaaagacat 199304
to top
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    aaatgagaagaagaagaaaa 230
              ||||||||||||||||||||
Sbjct: 255309 aaatgagaagaagaagaaaa 255290
to top
>gb|AC113092.25| Mus musculus chromosome 6, clone RP23-309N11, complete sequence
          Length = 186431

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    agaagaagaagaaaagacat 235
              ||||||||||||||||||||
Sbjct: 170667 agaagaagaagaaaagacat 170686
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    atatactgcccggttctcga 358
              ||||||||||||||||||||
Sbjct: 635213 atatactgcccggttctcga 635194
to top
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    atatactgcccggttctcga 358
              ||||||||||||||||||||
Sbjct: 644352 atatactgcccggttctcga 644333
to top
>ref|XM_956995.1| Neurospora crassa OR74A hypothetical protein (NCU07955.1) partial
            mRNA
          Length = 2016

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  catcgtcgcctacatcaacg 389
            ||||||||||||||||||||
Sbjct: 1755 catcgtcgcctacatcaacg 1774
to top
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    atatactgcccggttctcga 358
              ||||||||||||||||||||
Sbjct: 644394 atatactgcccggttctcga 644375
to top
>ref|XM_328660.1| Neurospora crassa OR74A hypothetical protein (NCU07955.1) partial
            mRNA
          Length = 2016

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  catcgtcgcctacatcaacg 389
            ||||||||||||||||||||
Sbjct: 1755 catcgtcgcctacatcaacg 1774
to top
>gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosome 8, complete sequence
          Length = 233354

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    aaatgagaagaagaagaaaa 230
              ||||||||||||||||||||
Sbjct: 113696 aaatgagaagaagaagaaaa 113715
to top
>gb|AC183679.3| Pan troglodytes BAC clone CH251-400O3 from chromosome 10, complete
             sequence
          Length = 203130

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   aaatgagaagaagaagaaaa 230
             ||||||||||||||||||||
Sbjct: 88390 aaatgagaagaagaagaaaa 88371
to top
>ref|XM_750567.1| Aspergillus fumigatus Af293 alcohol dehydrogenase (Afu2g13270)
           partial mRNA
          Length = 1098

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  tggtgaggtattcctgcactgtac 102
           |||||||||||||||||| |||||
Sbjct: 397 tggtgaggtattcctgcagtgtac 374
to top
>emb|Z70206.1|CEC49F8 Caenorhabditis elegans Cosmid C49F8, complete sequence
          Length = 39435

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   aaatgagaagaagaagaaaa 230
             ||||||||||||||||||||
Sbjct: 17262 aaatgagaagaagaagaaaa 17243
to top
>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence
          Length = 230940

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 221    aagaagaaaagacattgttgtgga 244
              ||||||||||||||||||| ||||
Sbjct: 102157 aagaagaaaagacattgttttgga 102134
to top
>ref|XM_647050.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (130.t00012)
            partial mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 207  tgataaatgagaagaagaagaaaa 230
            |||||||| |||||||||||||||
Sbjct: 1608 tgataaattagaagaagaagaaaa 1631
to top
>gb|AC073884.4| Homo sapiens BAC clone CTD-2006F7 from 7, complete sequence
          Length = 66224

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   aaatgagaagaagaagaaaa 230
             ||||||||||||||||||||
Sbjct: 36178 aaatgagaagaagaagaaaa 36159
to top
>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    atatactgcccggttctcga 358
              ||||||||||||||||||||
Sbjct: 632642 atatactgcccggttctcga 632623
to top
>emb|AL591519.5| Human DNA sequence from clone RP11-160E20 on chromosome 6, complete
             sequence
          Length = 99611

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    cccaagtgtggtaatgccct 65
             ||||||||||||||||||||
Sbjct: 62904 cccaagtgtggtaatgccct 62923
to top
>emb|AL591473.3| Human DNA sequence from clone RP11-256G5 on chromosome 6 Contains a
             ribosomal protein L36a (RPL36A) pseudogene, complete
             sequence
          Length = 40120

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   ggcacattgacaacagctcc 415
             ||||||||||||||||||||
Sbjct: 10394 ggcacattgacaacagctcc 10375
to top
>emb|AL445427.23| Human DNA sequence from clone RP5-1091A7 on chromosome 1p22.2-31.1
             Contains the 5' end of the COL24A1 gene for collagen type
             XXIV alpha 1 and two CpG islands, complete sequence
          Length = 111132

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   gaagaagaagaaaagacatt 236
             ||||||||||||||||||||
Sbjct: 45823 gaagaagaagaaaagacatt 45804
to top
>emb|AL391992.8| Human DNA sequence from clone RP11-2N7 on chromosome 10, complete
             sequence
          Length = 97655

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   aaatgagaagaagaagaaaa 230
             ||||||||||||||||||||
Sbjct: 49438 aaatgagaagaagaagaaaa 49419
to top
>emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C13 on chromosome 6q25.2-26 Contains
              the 5' end of a novel gene, a hypothetical protein PNAS-131
              pseudogene and a CpG island, complete sequence
          Length = 150336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    attgtcagctcagctcaagg 142
              ||||||||||||||||||||
Sbjct: 126012 attgtcagctcagctcaagg 126031
to top
>emb|X87834.1|ECPLCKAIL E.coli plasmid cka, cki and ckl genes
          Length = 2162

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 agctcctgtttccagagttgcagg 433
           |||| |||||||||||||||||||
Sbjct: 907 agctactgtttccagagttgcagg 930
to top
>gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosome 12, complete sequence
          Length = 220129

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    agaagaagaagaaaagacat 235
              ||||||||||||||||||||
Sbjct: 190716 agaagaagaagaaaagacat 190697
to top
>emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome 4, BAC clone F9N11
          Length = 87635

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   ataaatgagaagaagaagaaaaga 232
             ||||||||||||||||||| ||||
Sbjct: 87195 ataaatgagaagaagaagagaaga 87218
to top
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72
          Length = 198924

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 209    ataaatgagaagaagaagaaaaga 232
              ||||||||||||||||||| ||||
Sbjct: 160216 ataaatgagaagaagaagagaaga 160239
to top
>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17
          Length = 198176

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aatgagaagaagaagaaaag 231
              ||||||||||||||||||||
Sbjct: 165127 aatgagaagaagaagaaaag 165146
to top
>gb|AC160756.7| Mus musculus chromosome 15, clone RP23-158H4, complete sequence
          Length = 194707

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  ataaatgagaagaagaagaa 228
            ||||||||||||||||||||
Sbjct: 1014 ataaatgagaagaagaagaa 1033
to top
>emb|AL731860.8| Mouse DNA sequence from clone RP23-367H4 on chromosome 11 Contains the 5'
              end of the AF424697 gene for DNA sequence AF424697
              (FLJ21950, KIAA0903-like) and a CpG island, complete
              sequence
          Length = 119258

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    ataaatgagaagaagaagaa 228
              ||||||||||||||||||||
Sbjct: 100210 ataaatgagaagaagaagaa 100191



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    ataaatgagaagaagaagaa 228
              ||||||||||||||||||||
Sbjct: 100145 ataaatgagaagaagaagaa 100126
to top
>emb|BX119926.20| Zebrafish DNA sequence from clone CH211-42C8 in linkage group 14,
              complete sequence
          Length = 174863

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    gaagaagaaaagacattgtt 239
              ||||||||||||||||||||
Sbjct: 161079 gaagaagaaaagacattgtt 161060
to top
>emb|CR385064.7| Zebrafish DNA sequence from clone CH211-236H18 in linkage group 5,
              complete sequence
          Length = 185245

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aaaggaacccagttcaaaga 164
              ||||||||||||||||||||
Sbjct: 176534 aaaggaacccagttcaaaga 176553
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    gagaagaagaagaaaagaca 234
              ||||||||||||||||||||
Sbjct: 489077 gagaagaagaagaaaagaca 489096
to top
>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   agaagaagaagaaaagacat 235
             ||||||||||||||||||||
Sbjct: 54592 agaagaagaagaaaagacat 54573
to top
>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 142364

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  agaagaagaagaaaagacat 235
            ||||||||||||||||||||
Sbjct: 1899 agaagaagaagaaaagacat 1918
to top
>gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, complete sequence
          Length = 205231

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    ataaatgagaagaagaagaa 228
              ||||||||||||||||||||
Sbjct: 109501 ataaatgagaagaagaagaa 109482
to top
>gb|AC147961.3| Medicago truncatula chromosome 7 BAC clone mth2-39i23, complete
             sequence
          Length = 131165

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   aaatgagaagaagaagaaaa 230
             ||||||||||||||||||||
Sbjct: 22890 aaatgagaagaagaagaaaa 22909
to top
>emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 in linkage group 14,
              complete sequence
          Length = 198776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    gaagaagaaaagacattgtt 239
              ||||||||||||||||||||
Sbjct: 188724 gaagaagaaaagacattgtt 188743
to top
>ref|NM_001028362.1| Caenorhabditis elegans Y57G11C.49 (Y57G11C.49) mRNA, complete cds
          Length = 1383

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 206  ttgataaatgagaagaagaagaaa 229
            |||| |||||||||||||||||||
Sbjct: 1341 ttgaaaaatgagaagaagaagaaa 1318
to top
>gb|AC084213.19|AC084213 Mus musculus 1 BAC RP23-470F8 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 109501

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   agaagaagaagaaaagacat 235
             ||||||||||||||||||||
Sbjct: 55532 agaagaagaagaaaagacat 55513
to top
>gb|AC157375.2| Medicago truncatula chromosome 2 BAC clone mth2-55b12, complete
             sequence
          Length = 125311

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   attgacaacagctcctgttt 420
             ||||||||||||||||||||
Sbjct: 88957 attgacaacagctcctgttt 88976
to top
>gb|BC085493.1| Mus musculus ribosomal protein L13, mRNA (cDNA clone MGC:102076
           IMAGE:6815564), complete cds
          Length = 729

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 agaagaagaagaaaagacat 235
           ||||||||||||||||||||
Sbjct: 573 agaagaagaagaaaagacat 592
to top
>gb|AC068665.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-426K16, complete
              sequence
          Length = 205937

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    gagaagaagaagaaaagaca 234
              ||||||||||||||||||||
Sbjct: 106286 gagaagaagaagaaaagaca 106305
to top
>gb|AF492632.1| Capsicum annuum putative pectate-lyase (upa8) mRNA, partial cds
          Length = 1041

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 gagaagaagaagaaaagaca 234
           ||||||||||||||||||||
Sbjct: 123 gagaagaagaagaaaagaca 104
to top
>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete
             sequence
          Length = 208332

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   agaagaagaagaaaagacat 235
             ||||||||||||||||||||
Sbjct: 99230 agaagaagaagaaaagacat 99249
to top
>gb|AY929248.1| Escherichia coli plasmid pColK-K235, complete sequence
          Length = 8318

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  agctcctgtttccagagttgcagg 433
            |||| |||||||||||||||||||
Sbjct: 3384 agctactgtttccagagttgcagg 3407
to top
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence
          Length = 313573

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   ttgataaatgagaagaagaagaaa 229
             |||| |||||||||||||||||||
Sbjct: 83126 ttgaaaaatgagaagaagaagaaa 83103
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>gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6
          Length = 112629

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aatgagaagaagaagaaaag 231
              ||||||||||||||||||||
Sbjct: 102035 aatgagaagaagaagaaaag 102054
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>gb|AF144402.1|AF144402 Allium senescens 5S ribosomal RNA gene, partial sequence
          Length = 436

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 aaatgagaagaagaagaaaa 230
           ||||||||||||||||||||
Sbjct: 187 aaatgagaagaagaagaaaa 168
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>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE
          Length = 125647

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tattgtcagctcagctcaag 141
             ||||||||||||||||||||
Sbjct: 63588 tattgtcagctcagctcaag 63569
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    atatactgcccggttctcga 358
              ||||||||||||||||||||
Sbjct: 644352 atatactgcccggttctcga 644333
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>emb|CT025623.13| Mouse DNA sequence from clone RP23-397E11 on chromosome 12, complete
              sequence
          Length = 205791

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    agaagaagaagaaaagacat 235
              ||||||||||||||||||||
Sbjct: 193586 agaagaagaagaaaagacat 193605
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>gb|AC138111.3| Mus musculus BAC clone RP24-262B6 from 1, complete sequence
          Length = 138380

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   agaagaagaagaaaagacat 235
             ||||||||||||||||||||
Sbjct: 99321 agaagaagaagaaaagacat 99340
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>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete
              sequence
          Length = 189848

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    aaatgagaagaagaagaaaa 230
              ||||||||||||||||||||
Sbjct: 123546 aaatgagaagaagaagaaaa 123565
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>gb|U27452.1|ECU27452 Escherichia coli plasmid pColK-K235 colicin K operon: colicin K
            activity protein (cka), colicin K immunity protein (cki)
            and colicin K lysis protein (ckl) genes, complete cds
          Length = 2270

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  agctcctgtttccagagttgcagg 433
            |||| |||||||||||||||||||
Sbjct: 996  agctactgtttccagagttgcagg 1019
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>gb|M63166.1|ATHMERI5G Arabidopsis thaliana meri-5 gene, complete cds
          Length = 1593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 209 ataaatgagaagaagaagaaaaga 232
           ||||||||||||||||||| ||||
Sbjct: 218 ataaatgagaagaagaagagaaga 195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,616,706
Number of Sequences: 3902068
Number of extensions: 4616706
Number of successful extensions: 143902
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143354
Number of HSP's gapped (non-prelim): 548
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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