>ref|XM_464809.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 810

 Score =  125 bits (63), Expect = 1e-25
 Identities = 141/167 (84%)
 Strand = Plus / Minus

                                                                       
Query: 238 ctatcgcatcgcggctccctcacacataaggagctcttgcttggcctgcattgaggtggc 297
           |||||||||||| |||||||| |||   || ||||| |||||||||||||||||||  ||
Sbjct: 810 ctatcgcatcgccgctccctcgcacgccagcagctcatgcttggcctgcattgaggccgc 751

                                                                       
Query: 298 cgtggccatgtctgtgccgcctgtggccttgatcttctggtggtggaacagttgccgtag 357
           |||||| ||||| | ||| || ||||||||||||| ||| |||||| ||| ||| |||||
Sbjct: 750 cgtggcgatgtcggcgcctccggtggccttgatctgctgctggtggtacacttggcgtag 691

                                                          
Query: 358 tcgctcaatctcctctttgagtgcctcttgatgagcatctttgaaga 404
            |||||||||||||  || || ||||| || ||||||||||||||||
Sbjct: 690 ccgctcaatctccttcttcagagcctcctggtgagcatctttgaaga 644

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 7e-21
 Identities = 115/135 (85%)
 Strand = Plus / Minus

                                                                           
Query: 237     gctatcgcatcgcggctccctcacacataaggagctcttgcttggcctgcattgaggtgg 296
               ||||||||||||| |||||||| |||   || ||||| |||||||||||||||||||  |
Sbjct: 8324624 gctatcgcatcgccgctccctcgcacgccagcagctcatgcttggcctgcattgaggccg 8324565

                                                                           
Query: 297     ccgtggccatgtctgtgccgcctgtggccttgatcttctggtggtggaacagttgccgta 356
               ||||||| ||||| | ||| || ||||||||||||| ||| |||||| ||| ||| ||||
Sbjct: 8324564 ccgtggcgatgtcggcgcctccggtggccttgatctgctgctggtggtacacttggcgta 8324505

                              
Query: 357     gtcgctcaatctcct 371
               | |||||||||||||
Sbjct: 8324504 gccgctcaatctcct 8324490

>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0090H18
          Length = 174842

 Score =  109 bits (55), Expect = 7e-21
 Identities = 115/135 (85%)
 Strand = Plus / Minus

                                                                          
Query: 237    gctatcgcatcgcggctccctcacacataaggagctcttgcttggcctgcattgaggtgg 296
              ||||||||||||| |||||||| |||   || ||||| |||||||||||||||||||  |
Sbjct: 101295 gctatcgcatcgccgctccctcgcacgccagcagctcatgcttggcctgcattgaggccg 101236

                                                                          
Query: 297    ccgtggccatgtctgtgccgcctgtggccttgatcttctggtggtggaacagttgccgta 356
              ||||||| ||||| | ||| || ||||||||||||| ||| |||||| ||| ||| ||||
Sbjct: 101235 ccgtggcgatgtcggcgcctccggtggccttgatctgctgctggtggtacacttggcgta 101176

                             
Query: 357    gtcgctcaatctcct 371
              | |||||||||||||
Sbjct: 101175 gccgctcaatctcct 101161

>ref|NM_188406.1| Oryza sativa (japonica cultivar-group), Ozsa8132 predicted mRNA
          Length = 864

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 377 agtgcctcttgatgagcatctttgaaga 404
           |||||||| |||||||||||||||||||
Sbjct: 704 agtgcctcctgatgagcatctttgaaga 677

>gb|AC112673.7| Homo sapiens chromosome 8, clone RP11-212F11, complete sequence
          Length = 167547

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 316   gcctgtggccttgatcttctgg 337
             ||||||||||||||||||||||
Sbjct: 28408 gcctgtggccttgatcttctgg 28387

>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds,
              alternatively spliced
          Length = 379048

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 316    gcctgtggccttgatcttctgg 337
              ||||||||||||||||||||||
Sbjct: 355065 gcctgtggccttgatcttctgg 355086

>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence
          Length = 222363

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 185    agatgagtgaatgaagaaaat 205
              |||||||||||||||||||||
Sbjct: 148109 agatgagtgaatgaagaaaat 148089

>gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, complete sequence
          Length = 165977

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    caatgaacatgtcaaactgca 141
              |||||||||||||||||||||
Sbjct: 101759 caatgaacatgtcaaactgca 101739

>gb|AC107834.13| Mus musculus chromosome 1, clone RP23-251L12, complete sequence
          Length = 180525

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   agatgagtgaatgaagaaaat 205
             |||||||||||||||||||||
Sbjct: 67676 agatgagtgaatgaagaaaat 67696

>gb|AC124522.4| Mus musculus BAC clone RP23-397A19 from chromosome 10, complete
             sequence
          Length = 196485

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   agatgagtgaatgaagaaaat 205
             |||||||||||||||||||||
Sbjct: 79416 agatgagtgaatgaagaaaat 79396

>gb|AC128662.4| Mus musculus BAC clone RP24-440E3 from chromosome 6, complete sequence
          Length = 134729

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   agatgagtgaatgaagaaaat 205
             |||||||||||||||||||||
Sbjct: 51857 agatgagtgaatgaagaaaat 51837

>gb|AC122879.3| Mus musculus BAC clone RP23-76C10 from 1, complete sequence
          Length = 250884

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   agatgagtgaatgaagaaaat 205
             |||||||||||||||||||||
Sbjct: 85342 agatgagtgaatgaagaaaat 85322

>gb|AC069067.17| Homo sapiens 3 BAC RP11-454C18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172213

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    gagtgaatgaagaaaatcacc 209
              |||||||||||||||||||||
Sbjct: 145976 gagtgaatgaagaaaatcacc 145956

>gb|AC017016.5|AC017016 Homo sapiens BAC clone RP11-152H13 from 3, complete sequence
          Length = 180681

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   gagtgaatgaagaaaatcacc 209
             |||||||||||||||||||||
Sbjct: 24239 gagtgaatgaagaaaatcacc 24259

>gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome 9, complete sequence
          Length = 190832

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 185    agatgagtgaatgaagaaaat 205
              |||||||||||||||||||||
Sbjct: 109349 agatgagtgaatgaagaaaat 109369

>emb|AL358341.3|CNS05TEC Human chromosome 14 DNA sequence BAC R-1126O17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 136905

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 185    agatgagtgaatgaagaaaat 205
              |||||||||||||||||||||
Sbjct: 105443 agatgagtgaatgaagaaaat 105423

>gb|AC163216.10| Mus musculus chromosome 1, clone RP23-69G5, complete sequence
          Length = 260188

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 185  agatgagtgaatgaagaaaat 205
            |||||||||||||||||||||
Sbjct: 3869 agatgagtgaatgaagaaaat 3889

>gb|AC166798.3| Mus musculus chromosome 3, clone RP23-442J19, complete sequence
          Length = 216754

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      gaaaatatctttaccaacac 25
              ||||||||||||||||||||
Sbjct: 146495 gaaaatatctttaccaacac 146476

>gb|AC164423.2| Mus musculus chromosome 3, clone RP24-361M10, complete sequence
          Length = 151556

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      gaaaatatctttaccaacac 25
              ||||||||||||||||||||
Sbjct: 124203 gaaaatatctttaccaacac 124184

>gb|AY020136.1| Oryza sativa microsatellite MRG2461 containing (CT)X20, closest to
           marker S10251, genomic sequence
          Length = 240

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 atcacatgaacaaaaacaat 124
           ||||||||||||||||||||
Sbjct: 176 atcacatgaacaaaaacaat 157

>gb|AY017993.1| Oryza sativa microsatellite MRG0318 containing (AG)X20, closest to
           marker R2466, genomic sequence
          Length = 240

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 atcacatgaacaaaaacaat 124
           ||||||||||||||||||||
Sbjct: 66  atcacatgaacaaaaacaat 85

>gb|BT013754.1| Lycopersicon esculentum clone 132620F, mRNA sequence
          Length = 2210

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  atcaccacaaaaaggctggt 223
            ||||||||||||||||||||
Sbjct: 1747 atcaccacaaaaaggctggt 1766

>gb|AC074225.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-78M3, complete
             sequence
          Length = 197412

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   aacaaaaacaatgaacatgtcaaa 136
             ||||||||||||||| ||||||||
Sbjct: 18067 aacaaaaacaatgaatatgtcaaa 18044

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 105     atcacatgaacaaaaacaat 124
               ||||||||||||||||||||
Sbjct: 8321170 atcacatgaacaaaaacaat 8321151

>gb|AC157022.11| Mus musculus 6 BAC RP24-354A6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 149997

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gaaaatatctttaccaacac 25
             ||||||||||||||||||||
Sbjct: 56435 gaaaatatctttaccaacac 56416

>gb|AY221088.1| Solanum tuberosum cellulose synthase (StCesA4) mRNA, partial cds
          Length = 3527

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  atcaccacaaaaaggctggt 223
            ||||||||||||||||||||
Sbjct: 1454 atcaccacaaaaaggctggt 1473

>gb|AC133525.2| Mus musculus BAC clone RP23-58N6 from chromosome 18, complete sequence
          Length = 226579

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      gaaaatatctttaccaacac 25
              ||||||||||||||||||||
Sbjct: 176307 gaaaatatctttaccaacac 176326

>gb|AC002990.1|HUAC002990 Human Chromosome 16 BAC clone CIT987SK-A-1000D7, complete sequence
          Length = 106760

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   atgaacaaaaacaatgaaca 129
             ||||||||||||||||||||
Sbjct: 46300 atgaacaaaaacaatgaaca 46281

>emb|BX908770.13| Zebrafish DNA sequence from clone CH211-198A12 in linkage group 13,
             complete sequence
          Length = 126240

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tttaccaacacaaatgtaag 34
             ||||||||||||||||||||
Sbjct: 75830 tttaccaacacaaatgtaag 75811

>emb|AL928938.3| Zebrafish DNA sequence from clone BUSM1-64D20 in linkage group 12
             Contains the zebrafish nog3 gene for noggin 3, two novel
             genes for protein with a type I
             phosphodiesterase/nucleotide pyrophosphatase domain and a
             CpG island, complete sequence
          Length = 96976

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   aacatcacatgaacaaaaac 121
             ||||||||||||||||||||
Sbjct: 12919 aacatcacatgaacaaaaac 12900

>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
          Length = 3773

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  aatcaccacaaaaaggctgg 222
            ||||||||||||||||||||
Sbjct: 1670 aatcaccacaaaaaggctgg 1689

>emb|BX323053.6| Zebrafish DNA sequence from clone DKEYP-53E9 in linkage group 12,
             complete sequence
          Length = 92153

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aacatgtcaaactgcacaaa 145
             ||||||||||||||||||||
Sbjct: 63672 aacatgtcaaactgcacaaa 63653

>gb|AC157214.2| Mus musculus BAC clone RP23-35J2 from chromosome 19, complete sequence
          Length = 207625

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     gaaaatatctttaccaacac 25
             ||||||||||||||||||||
Sbjct: 59954 gaaaatatctttaccaacac 59973

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 105     atcacatgaacaaaaacaat 124
               ||||||||||||||||||||
Sbjct: 8319005 atcacatgaacaaaaacaat 8318986

>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
             complete sequence
          Length = 126040

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   atcacatgaacaaaaacaat 124
             ||||||||||||||||||||
Sbjct: 58426 atcacatgaacaaaaacaat 58407

>gb|AC140780.3| Mus musculus BAC clone RP24-500J16 from chromosome 5, complete sequence
          Length = 166260

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      atgaaaatatctttaccaac 23
              ||||||||||||||||||||
Sbjct: 114149 atgaaaatatctttaccaac 114168

>emb|BX897722.15| Zebrafish DNA sequence from clone CH211-114K18 in linkage group 12,
             complete sequence
          Length = 84123

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   aacatcacatgaacaaaaac 121
             ||||||||||||||||||||
Sbjct: 58507 aacatcacatgaacaaaaac 58488

>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12,
             complete sequence
          Length = 262809

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aacatgtcaaactgcacaaa 145
             ||||||||||||||||||||
Sbjct: 67402 aacatgtcaaactgcacaaa 67383


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,608,676
Number of Sequences: 3902068
Number of extensions: 4608676
Number of successful extensions: 92209
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92071
Number of HSP's gapped (non-prelim): 138
length of query: 404
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 382
effective length of database: 17,147,199,772
effective search space: 6550230312904
effective search space used: 6550230312904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)