ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet39b02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 315 bits (159), Expect = 7e-83 Identities = 237/263 (90%) Strand = Plus / Plus Query: 189 tacaccagcgtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttc 248 ||||| ||||||||||||||||| ||| ||||||| || |||||||| || ||||| ||| Sbjct: 6191263 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 6191322 Query: 249 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 308 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 6191323 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 6191382 Query: 309 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 368 |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 6191383 ccggcgtagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 6191442 Query: 369 agcggcgcctcgcgctccccctggtagaacccgtcgccaaacgggttggtcaccgcgcca 428 |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6191443 agcgccgcgccgcgctccccctggtagaacccgtcgccgaacgggttggtcaccgcgccg 6191502 Query: 429 gccaccatgctggccacgttgat 451 ||||||||||||||||||||||| Sbjct: 6191503 gccaccatgctggccacgttgat 6191525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 387 ccctggtagaacccgtcgccaaacgggttggtcaccgcgccagccaccatgctggc 442 ||||||||| | ||||||| |||||||||||||||||||| |||| | ||||||| Sbjct: 6203111 ccctggtagtaggcgtcgccgaacgggttggtcaccgcgccggccagcgtgctggc 6203056 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 ccgtcgccaaacgggttggtcaccgcgccagcca 432 |||||||| |||||||||||||| ||||| |||| Sbjct: 6211074 ccgtcgccgaacgggttggtcacggcgccggcca 6211041 Score = 44.1 bits (22), Expect = 0.39 Identities = 158/197 (80%), Gaps = 6/197 (3%) Strand = Plus / Plus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgcc-gtgggcgttgtagctcgctccggtgg 288 |||||||||||||||||||| ||| ||| ||| | |||||||||||| || |||||| Sbjct: 6189005 cgccggcagcaggtacttccggccg-gcgagcccgacggcgttgtagctggcgccggtga 6189063 Query: 289 ccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccg 348 || |||| ||||||| ||||| ||| |||||| | ||||| ||||| | || || | Sbjct: 6189064 ccgggtccttgagcagcttgccggggtagccggggaaggcgccgctgccgaagacgccgg 6189123 Query: 349 ggcacgccgtcgcggcctcca--gcggcgcctcgcgctccccctggtagaacccgtcgcc 406 ||||||||| |||||||||| ||||||| ||| || ||||||||| |||||||||| Sbjct: 6189124 cgcacgccgtggcggcctccatcccggcgcc-ggcg-tcgccctggtagtacccgtcgcc 6189181 Query: 407 aaacgggttggtcaccg 423 || ||||| ||||||| Sbjct: 6189182 gaaggggttcgtcaccg 6189198 Score = 40.1 bits (20), Expect = 6.1 Identities = 71/88 (80%) Strand = Plus / Minus Query: 240 aggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccacc 299 |||||||||| || || |||||| |||||||||||| | ||||| | | |||| || Sbjct: 6211233 aggtacttccggccatgggcgccgacggcgttgtagctgccaccggtcgtctcgtcgacg 6211174 Query: 300 agcagctggccggcgtacccggggtacg 327 |||| || ||||||||||||||||||| Sbjct: 6211173 agcaccttcccggcgtacccggggtacg 6211146
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 315 bits (159), Expect = 7e-83 Identities = 237/263 (90%) Strand = Plus / Plus Query: 189 tacaccagcgtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttc 248 ||||| ||||||||||||||||| ||| ||||||| || |||||||| || ||||| ||| Sbjct: 105082 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 105141 Query: 249 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 308 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 105142 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 105201 Query: 309 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 368 |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 105202 ccggcgtagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 105261 Query: 369 agcggcgcctcgcgctccccctggtagaacccgtcgccaaacgggttggtcaccgcgcca 428 |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105262 agcgccgcgccgcgctccccctggtagaacccgtcgccgaacgggttggtcaccgcgccg 105321 Query: 429 gccaccatgctggccacgttgat 451 ||||||||||||||||||||||| Sbjct: 105322 gccaccatgctggccacgttgat 105344 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 387 ccctggtagaacccgtcgccaaacgggttggtcaccgcgccagccaccatgctggc 442 ||||||||| | ||||||| |||||||||||||||||||| |||| | ||||||| Sbjct: 116930 ccctggtagtaggcgtcgccgaacgggttggtcaccgcgccggccagcgtgctggc 116875 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 ccgtcgccaaacgggttggtcaccgcgccagcca 432 |||||||| |||||||||||||| ||||| |||| Sbjct: 124893 ccgtcgccgaacgggttggtcacggcgccggcca 124860 Score = 44.1 bits (22), Expect = 0.39 Identities = 158/197 (80%), Gaps = 6/197 (3%) Strand = Plus / Plus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgcc-gtgggcgttgtagctcgctccggtgg 288 |||||||||||||||||||| ||| ||| ||| | |||||||||||| || |||||| Sbjct: 102824 cgccggcagcaggtacttccggccg-gcgagcccgacggcgttgtagctggcgccggtga 102882 Query: 289 ccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccg 348 || |||| ||||||| ||||| ||| |||||| | ||||| ||||| | || || | Sbjct: 102883 ccgggtccttgagcagcttgccggggtagccggggaaggcgccgctgccgaagacgccgg 102942 Query: 349 ggcacgccgtcgcggcctcca--gcggcgcctcgcgctccccctggtagaacccgtcgcc 406 ||||||||| |||||||||| ||||||| ||| || ||||||||| |||||||||| Sbjct: 102943 cgcacgccgtggcggcctccatcccggcgcc-ggcg-tcgccctggtagtacccgtcgcc 103000 Query: 407 aaacgggttggtcaccg 423 || ||||| ||||||| Sbjct: 103001 gaaggggttcgtcaccg 103017 Score = 40.1 bits (20), Expect = 6.1 Identities = 71/88 (80%) Strand = Plus / Minus Query: 240 aggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccacc 299 |||||||||| || || |||||| |||||||||||| | ||||| | | |||| || Sbjct: 125052 aggtacttccggccatgggcgccgacggcgttgtagctgccaccggtcgtctcgtcgacg 124993 Query: 300 agcagctggccggcgtacccggggtacg 327 |||| || ||||||||||||||||||| Sbjct: 124992 agcaccttcccggcgtacccggggtacg 124965
>dbj|AK061401.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G10, full insert sequence Length = 962 Score = 315 bits (159), Expect = 7e-83 Identities = 237/263 (90%) Strand = Plus / Minus Query: 189 tacaccagcgtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttc 248 ||||| ||||||||||||||||| ||| ||||||| || |||||||| || ||||| ||| Sbjct: 851 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 792 Query: 249 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 308 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 791 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 732 Query: 309 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 368 |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 731 ccggcgtagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 672 Query: 369 agcggcgcctcgcgctccccctggtagaacccgtcgccaaacgggttggtcaccgcgcca 428 |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 671 agcgccgcgccgcgctccccctggtagaacccgtcgccgaacgggttggtcaccgcgccg 612 Query: 429 gccaccatgctggccacgttgat 451 ||||||||||||||||||||||| Sbjct: 611 gccaccatgctggccacgttgat 589
>dbj|AK099621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053E02, full insert sequence Length = 837 Score = 307 bits (155), Expect = 2e-80 Identities = 236/263 (89%) Strand = Plus / Plus Query: 189 tacaccagcgtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttc 248 ||||| ||||||||||||||||| ||| ||||||| || |||||||| || ||||| ||| Sbjct: 40 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 99 Query: 249 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 308 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 100 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 159 Query: 309 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 368 ||||| || || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 160 ccggcctagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 219 Query: 369 agcggcgcctcgcgctccccctggtagaacccgtcgccaaacgggttggtcaccgcgcca 428 |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 220 agcgccgcgccgcgctccccctggtagaacccgtcgccgaacgggttggtcaccgcgccg 279 Query: 429 gccaccatgctggccacgttgat 451 ||||||||||||||||||||||| Sbjct: 280 gccaccatgctggccacgttgat 302
>ref|XM_467877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 143 bits (72), Expect = 6e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 231 gccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggcc 290 ||||| |||||||| ||||||||||| || || | |||||||||||||||||| || || Sbjct: 1018 gccggaagcaggtatttcctcccgtgtgctccattggcgttgtagctcgctcccgtcgcg 959 Query: 291 ccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccggg 350 ||||||| ||| | ||||| || ||||||||||| || ||||||| |||||||| Sbjct: 958 gggtccaccgccaggttcccggcataaccggggtacgcaccgctgccgtagacccccgga 899 Query: 351 cacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaac 410 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 898 cacgccgtcgcggcctccagcggcgcctccttggggccctggtagaacccgtcgccgaac 839 Query: 411 gggttggtcaccgcgccagccaccatgctggc 442 ||||||||||| |||| || ||||||||||| Sbjct: 838 gggttggtcacgacgccggcgaccatgctggc 807
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 6e-31 Identities = 177/212 (83%) Strand = Plus / Plus Query: 231 gccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggcc 290 ||||| |||||||| ||||||||||| || || | |||||||||||||||||| || || Sbjct: 31859244 gccggaagcaggtatttcctcccgtgtgctccattggcgttgtagctcgctcccgtcgcg 31859303 Query: 291 ccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccggg 350 ||||||| ||| | ||||| || ||||||||||| || ||||||| |||||||| Sbjct: 31859304 gggtccaccgccaggttcccggcataaccggggtacgcaccgctgccgtagacccccgga 31859363 Query: 351 cacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaac 410 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 31859364 cacgccgtcgcggcctccagcggcgcctccttggggccctggtagaacccgtcgccgaac 31859423 Query: 411 gggttggtcaccgcgccagccaccatgctggc 442 ||||||||||| |||| || ||||||||||| Sbjct: 31859424 gggttggtcacgacgccggcgaccatgctggc 31859455 Score = 129 bits (65), Expect = 9e-27 Identities = 182/221 (82%) Strand = Plus / Minus Query: 198 gtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttcctcccgtgc 257 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 31870943 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 31870884 Query: 258 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 317 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 31870883 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 31870824 Query: 318 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcc 377 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 31870823 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgcg 31870764 Query: 378 tcgcgctccccctggtagaacccgtcgccaaacgggttggt 418 ||| || |||||| |||| |||| ||| ||||||||||| Sbjct: 31870763 tcggcgtcgccctggaagaagccgttgccgaacgggttggt 31870723 Score = 125 bits (63), Expect = 1e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 31842764 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 31842823 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||||| Sbjct: 31842824 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgg 31842883 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 31842884 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 31842943 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 31842944 cgggttggtcaccgtgccggccaccat 31842970 Score = 111 bits (56), Expect = 2e-21 Identities = 178/216 (82%), Gaps = 2/216 (0%) Strand = Plus / Plus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 31853826 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 31853885 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 31853886 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 31853945 Query: 348 gggcacgccgtcgcggcctccagcggcgcctcgc-gctccccctggtagaacccgtcgcc 406 ||||||||||| ||||||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 31853946 gggcacgccgtggcggcctccagcggcgcgtccctgct-gccctggtagtacccgtcgcc 31854004 Query: 407 aaacgggttggtcaccgcgccagccaccatgctggc 442 |||||||||||||||| ||| || | ||||||||| Sbjct: 31854005 gaacgggttggtcaccgtgccggcgagcatgctggc 31854040
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 143 bits (72), Expect = 6e-31 Identities = 177/212 (83%) Strand = Plus / Plus Query: 231 gccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggcc 290 ||||| |||||||| ||||||||||| || || | |||||||||||||||||| || || Sbjct: 20245 gccggaagcaggtatttcctcccgtgtgctccattggcgttgtagctcgctcccgtcgcg 20304 Query: 291 ccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccggg 350 ||||||| ||| | ||||| || ||||||||||| || ||||||| |||||||| Sbjct: 20305 gggtccaccgccaggttcccggcataaccggggtacgcaccgctgccgtagacccccgga 20364 Query: 351 cacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaac 410 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 20365 cacgccgtcgcggcctccagcggcgcctccttggggccctggtagaacccgtcgccgaac 20424 Query: 411 gggttggtcaccgcgccagccaccatgctggc 442 ||||||||||| |||| || ||||||||||| Sbjct: 20425 gggttggtcacgacgccggcgaccatgctggc 20456 Score = 129 bits (65), Expect = 9e-27 Identities = 182/221 (82%) Strand = Plus / Minus Query: 198 gtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttcctcccgtgc 257 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 31944 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 31885 Query: 258 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 317 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 31884 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 31825 Query: 318 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcc 377 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 31824 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgcg 31765 Query: 378 tcgcgctccccctggtagaacccgtcgccaaacgggttggt 418 ||| || |||||| |||| |||| ||| ||||||||||| Sbjct: 31764 tcggcgtcgccctggaagaagccgttgccgaacgggttggt 31724 Score = 125 bits (63), Expect = 1e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 3765 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 3824 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||||| Sbjct: 3825 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgg 3884 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 3885 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 3944 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 3945 cgggttggtcaccgtgccggccaccat 3971 Score = 111 bits (56), Expect = 2e-21 Identities = 178/216 (82%), Gaps = 2/216 (0%) Strand = Plus / Plus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 14827 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 14886 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 14887 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 14946 Query: 348 gggcacgccgtcgcggcctccagcggcgcctcgc-gctccccctggtagaacccgtcgcc 406 ||||||||||| ||||||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 14947 gggcacgccgtggcggcctccagcggcgcgtccctgct-gccctggtagtacccgtcgcc 15005 Query: 407 aaacgggttggtcaccgcgccagccaccatgctggc 442 |||||||||||||||| ||| || | ||||||||| Sbjct: 15006 gaacgggttggtcaccgtgccggcgagcatgctggc 15041
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 143 bits (72), Expect = 6e-31 Identities = 177/212 (83%) Strand = Plus / Plus Query: 231 gccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggcc 290 ||||| |||||||| ||||||||||| || || | |||||||||||||||||| || || Sbjct: 155042 gccggaagcaggtatttcctcccgtgtgctccattggcgttgtagctcgctcccgtcgcg 155101 Query: 291 ccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccggg 350 ||||||| ||| | ||||| || ||||||||||| || ||||||| |||||||| Sbjct: 155102 gggtccaccgccaggttcccggcataaccggggtacgcaccgctgccgtagacccccgga 155161 Query: 351 cacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaac 410 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 155162 cacgccgtcgcggcctccagcggcgcctccttggggccctggtagaacccgtcgccgaac 155221 Query: 411 gggttggtcaccgcgccagccaccatgctggc 442 ||||||||||| |||| || ||||||||||| Sbjct: 155222 gggttggtcacgacgccggcgaccatgctggc 155253 Score = 125 bits (63), Expect = 1e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 138562 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 138621 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||||| Sbjct: 138622 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgg 138681 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 138682 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 138741 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 138742 cgggttggtcaccgtgccggccaccat 138768 Score = 111 bits (56), Expect = 2e-21 Identities = 178/216 (82%), Gaps = 2/216 (0%) Strand = Plus / Plus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 149624 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 149683 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 149684 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 149743 Query: 348 gggcacgccgtcgcggcctccagcggcgcctcgc-gctccccctggtagaacccgtcgcc 406 ||||||||||| ||||||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 149744 gggcacgccgtggcggcctccagcggcgcgtccctgct-gccctggtagtacccgtcgcc 149802 Query: 407 aaacgggttggtcaccgcgccagccaccatgctggc 442 |||||||||||||||| ||| || | ||||||||| Sbjct: 149803 gaacgggttggtcaccgtgccggcgagcatgctggc 149838
>dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C09, full insert sequence Length = 1222 Score = 143 bits (72), Expect = 6e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 231 gccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggcc 290 ||||| |||||||| ||||||||||| || || | |||||||||||||||||| || || Sbjct: 1018 gccggaagcaggtatttcctcccgtgtgctccattggcgttgtagctcgctcccgtcgcg 959 Query: 291 ccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccggg 350 ||||||| ||| | ||||| || ||||||||||| || ||||||| |||||||| Sbjct: 958 gggtccaccgccaggttcccggcataaccggggtacgcaccgctgccgtagacccccgga 899 Query: 351 cacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaac 410 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 898 cacgccgtcgcggcctccagcggcgcctccttggggccctggtagaacccgtcgccgaac 839 Query: 411 gggttggtcaccgcgccagccaccatgctggc 442 ||||||||||| |||| || ||||||||||| Sbjct: 838 gggttggtcacgacgccggcgaccatgctggc 807
>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA, complete cds Length = 1160 Score = 135 bits (68), Expect = 1e-28 Identities = 168/199 (84%), Gaps = 3/199 (1%) Strand = Plus / Minus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 |||||||| | ||||||||||||||| || || |||| ||| ||| |||| || ||| || Sbjct: 989 agcgccgggaccaggtacttcctcccatgggccccgttggcattgaagctggccccgctg 930 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| ||||||||||||| || ||||| |||||||||||||||||||||||||| || Sbjct: 929 gcctggtccaccagcagcgaccccgcgtagccggggtacgcgcccttgccgtacacgccg 870 Query: 348 gggcacgccgtcgcggcctccagcggcgcctc-gcg--ctccccctggtagaacccgtcg 404 | ||||||||| ||||||||||||||||| || ||| || ||||||||||||||| | Sbjct: 869 gcgcacgccgtggcggcctccagcggcgcgtcggcggagccctcctggtagaacccgttg 810 Query: 405 ccaaacgggttggtcaccg 423 || |||||||||||||||| Sbjct: 809 ccgaacgggttggtcaccg 791
>ref|XM_467879.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 129 bits (65), Expect = 9e-27 Identities = 182/221 (82%) Strand = Plus / Minus Query: 198 gtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttcctcccgtgc 257 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 926 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 867 Query: 258 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 317 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 866 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 807 Query: 318 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcc 377 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 806 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgcg 747 Query: 378 tcgcgctccccctggtagaacccgtcgccaaacgggttggt 418 ||| || |||||| |||| |||| ||| ||||||||||| Sbjct: 746 tcggcgtcgccctggaagaagccgttgccgaacgggttggt 706
>dbj|AK070419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049J22, full insert sequence Length = 1187 Score = 129 bits (65), Expect = 9e-27 Identities = 182/221 (82%) Strand = Plus / Minus Query: 198 gtggagcaggcggaggtggcggggtcaaacagcgccggcagcaggtacttcctcccgtgc 257 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 991 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 932 Query: 258 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 317 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 931 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 872 Query: 318 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcc 377 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 871 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgcg 812 Query: 378 tcgcgctccccctggtagaacccgtcgccaaacgggttggt 418 ||| || |||||| |||| |||| ||| ||||||||||| Sbjct: 811 tcggcgtcgccctggaagaagccgttgccgaacgggttggt 771
>gb|AY105815.1| Zea mays PCO102946 mRNA sequence Length = 1238 Score = 129 bits (65), Expect = 9e-27 Identities = 128/149 (85%) Strand = Plus / Minus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 |||||||| | |||||||||||||||||| || |||| ||| ||| |||| || ||| || Sbjct: 996 agcgccgggaccaggtacttcctcccgtgggccccgttggcattgaagctggccccgctg 937 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| ||| ||||||||| ||| ||||| |||||||||||||||||||||||||| || Sbjct: 936 gcctggtctaccagcagcgagccagcgtagccggggtacgcgcccttgccgtacacgccg 877 Query: 348 gggcacgccgtcgcggcctccagcggcgc 376 | ||||||||| ||||||||||||||||| Sbjct: 876 gcgcacgccgtggcggcctccagcggcgc 848
>ref|XM_506983.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.37-2 mRNA Length = 1129 Score = 125 bits (63), Expect = 1e-25 Identities = 171/207 (82%) Strand = Plus / Minus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 992 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 933 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||||| Sbjct: 932 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgg 873 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 872 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 813 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 812 cgggttggtcaccgtgccggccaccat 786
>ref|XM_467873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1127 Score = 125 bits (63), Expect = 1e-25 Identities = 171/207 (82%) Strand = Plus / Minus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 990 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 931 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||||| Sbjct: 930 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgg 871 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 870 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 811 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 810 cgggttggtcaccgtgccggccaccat 784
>dbj|AK063454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G05, full insert sequence Length = 1127 Score = 125 bits (63), Expect = 1e-25 Identities = 171/207 (82%) Strand = Plus / Minus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 990 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 931 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||||| Sbjct: 930 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgg 871 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 870 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 811 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 810 cgggttggtcaccgtgccggccaccat 784
>ref|XM_467876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1193 Score = 111 bits (56), Expect = 2e-21 Identities = 178/216 (82%), Gaps = 2/216 (0%) Strand = Plus / Minus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 1021 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 962 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 961 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 902 Query: 348 gggcacgccgtcgcggcctccagcggcgcctcgc-gctccccctggtagaacccgtcgcc 406 ||||||||||| ||||||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 901 gggcacgccgtggcggcctccagcggcgcgtccctgct-gccctggtagtacccgtcgcc 843 Query: 407 aaacgggttggtcaccgcgccagccaccatgctggc 442 |||||||||||||||| ||| || | ||||||||| Sbjct: 842 gaacgggttggtcaccgtgccggcgagcatgctggc 807
>dbj|AK062900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F03, full insert sequence Length = 1193 Score = 111 bits (56), Expect = 2e-21 Identities = 178/216 (82%), Gaps = 2/216 (0%) Strand = Plus / Minus Query: 228 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 287 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 1021 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 962 Query: 288 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 347 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 961 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 902 Query: 348 gggcacgccgtcgcggcctccagcggcgcctcgc-gctccccctggtagaacccgtcgcc 406 ||||||||||| ||||||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 901 gggcacgccgtggcggcctccagcggcgcgtccctgct-gccctggtagtacccgtcgcc 843 Query: 407 aaacgggttggtcaccgcgccagccaccatgctggc 442 |||||||||||||||| ||| || | ||||||||| Sbjct: 842 gaacgggttggtcaccgtgccggcgagcatgctggc 807
>ref|XM_467872.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 109 bits (55), Expect = 8e-21 Identities = 160/195 (82%) Strand = Plus / Minus Query: 242 gtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccag 301 ||||||||||| || |||||||| |||||||||||| |||||||||| |||| || || Sbjct: 979 gtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgag 920 Query: 302 cagctggccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgc 361 || | ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 919 gagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccgagca 860 Query: 362 ggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaacgggttggtcac 421 |||||||||||||| || | ||||||||||||||| ||||| ||||||||||||| Sbjct: 859 cgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgtacgggttggtcac 800 Query: 422 cgcgccagccaccat 436 || ||| |||||||| Sbjct: 799 cgtgccggccaccat 785
>dbj|AK119695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C06, full insert sequence Length = 1110 Score = 109 bits (55), Expect = 8e-21 Identities = 160/195 (82%) Strand = Plus / Minus Query: 242 gtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccag 301 ||||||||||| || |||||||| |||||||||||| |||||||||| |||| || || Sbjct: 979 gtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgag 920 Query: 302 cagctggccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgc 361 || | ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 919 gagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccgagca 860 Query: 362 ggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaacgggttggtcac 421 |||||||||||||| || | ||||||||||||||| ||||| ||||||||||||| Sbjct: 859 cgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgtacgggttggtcac 800 Query: 422 cgcgccagccaccat 436 || ||| |||||||| Sbjct: 799 cgtgccggccaccat 785
>dbj|AK101655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F02, full insert sequence Length = 1128 Score = 101 bits (51), Expect = 2e-18 Identities = 169/207 (81%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 230 cgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggc 289 |||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||| Sbjct: 991 cgccgggagcaggtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggt 932 Query: 290 cccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccgg 349 |||| || || || | ||||||| ||| ||||||||||| ||||||| || ||| Sbjct: 931 ggcgtcgacgaggagtttaccggcgttccccgggtacgcgccgctgccgtagactccc-c 873 Query: 350 gcacgccgtcgcggcctccagcggcgcctcgcgctccccctggtagaacccgtcgccaaa 409 |||||||| |||||||||||||| || | ||||||||||||||| ||||| | Sbjct: 872 gcacgccgagcacgcctccagcggcgcgtcctggggcccctggtagaacccatcgccgta 813 Query: 410 cgggttggtcaccgcgccagccaccat 436 |||||||||||||| ||| |||||||| Sbjct: 812 cgggttggtcaccgtgccggccaccat 786
>ref|XM_483034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 93.7 bits (47), Expect = 5e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 266 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 325 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 637 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 578 Query: 326 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctcg 380 ||||| |||| ||| ||||| ||| |||||| | |||||||||||||||||| Sbjct: 577 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctcg 523
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 5e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 266 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 325 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 23962452 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 23962511 Query: 326 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctcg 380 ||||| |||| ||| ||||| ||| |||||| | |||||||||||||||||| Sbjct: 23962512 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctcg 23962566
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 93.7 bits (47), Expect = 5e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 266 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 325 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 95603 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 95662 Query: 326 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctcg 380 ||||| |||| ||| ||||| ||| |||||| | |||||||||||||||||| Sbjct: 95663 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctcg 95717
>dbj|AK073011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I01, full insert sequence Length = 922 Score = 93.7 bits (47), Expect = 5e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 266 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 325 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 635 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 576 Query: 326 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctcg 380 ||||| |||| ||| ||||| ||| |||||| | |||||||||||||||||| Sbjct: 575 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctcg 521
>ref|NM_196156.1| Oryza sativa (japonica cultivar-group) putative phosphate-induced protein (OSJNBa0095C06.7), mRNA Length = 1005 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 321 gggtacgcgcccttgccgtacacccccgggcacgc 355 ||||||||||| ||||||||||||||||||||| Sbjct: 872 gggtacgcgccgcggccgtacacccccgggcacgc 838
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 321 gggtacgcgcccttgccgtacacccccgggcacgc 355 ||||||||||| ||||||||||||||||||||| Sbjct: 58756 gggtacgcgccgcggccgtacacccccgggcacgc 58722
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 321 gggtacgcgcccttgccgtacacccccgggcacgc 355 ||||||||||| ||||||||||||||||||||| Sbjct: 11474763 gggtacgcgccgcggccgtacacccccgggcacgc 11474729
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 321 gggtacgcgcccttgccgtacacccccgggcacgc 355 ||||||||||| ||||||||||||||||||||| Sbjct: 11481203 gggtacgcgccgcggccgtacacccccgggcacgc 11481169
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 ccgtcgccaaacgggttggtcaccgcgccagcca 432 |||||||| |||||||||||||| ||||| |||| Sbjct: 5150 ccgtcgccgaacgggttggtcacggcgccggcca 5117 Score = 40.1 bits (20), Expect = 6.1 Identities = 71/88 (80%) Strand = Plus / Minus Query: 240 aggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccacc 299 |||||||||| || || |||||| |||||||||||| | ||||| | | |||| || Sbjct: 5309 aggtacttccggccatgggcgccgacggcgttgtagctgccaccggtcgtctcgtcgacg 5250 Query: 300 agcagctggccggcgtacccggggtacg 327 |||| || ||||||||||||||||||| Sbjct: 5249 agcaccttcccggcgtacccggggtacg 5222
>dbj|AK058704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C08, full insert sequence Length = 1268 Score = 44.1 bits (22), Expect = 0.39 Identities = 158/197 (80%), Gaps = 6/197 (3%) Strand = Plus / Minus Query: 230 cgccggcagcaggtacttcctcccgtgcgcg-ccgtgggcgttgtagctcgctccggtgg 288 |||||||||||||||||||| ||| ||| | ||| |||||||||||| || |||||| Sbjct: 976 cgccggcagcaggtacttccggccg-gcgagcccgacggcgttgtagctggcgccggtga 918 Query: 289 ccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccg 348 || |||| ||||||| ||||| ||| |||||| | ||||| ||||| | || || | Sbjct: 917 ccgggtccttgagcagcttgccggggtagccggggaaggcgccgctgccgaagacgccgg 858 Query: 349 ggcacgccgtcgcggcctcca--gcggcgcctcgcgctccccctggtagaacccgtcgcc 406 ||||||||| |||||||||| ||||||| ||| || ||||||||| |||||||||| Sbjct: 857 cgcacgccgtggcggcctccatcccggcgcc-ggcg-tcgccctggtagtacccgtcgcc 800 Query: 407 aaacgggttggtcaccg 423 || ||||| ||||||| Sbjct: 799 gaaggggttcgtcaccg 783
>ref|NM_188039.1| Oryza sativa (japonica cultivar-group), Ozsa8459 predicted mRNA Length = 291 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cagcggcgcctcgcgctcccc 388 ||||||||||||||||||||| Sbjct: 154 cagcggcgcctcgcgctcccc 174
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 acaaaggctgatttacatttt 25 ||||||||||||||||||||| Sbjct: 1738417 acaaaggctgatttacatttt 1738437
>ref|XM_538639.2| PREDICTED: Canis familiaris similar to chromosome 14 open reading frame 68 (LOC481518), mRNA Length = 1509 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 cgccagccaccatgctggcca 444 ||||||||||||||||||||| Sbjct: 916 cgccagccaccatgctggcca 896
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cagcggcgcctcgcgctcccc 388 ||||||||||||||||||||| Sbjct: 9286334 cagcggcgcctcgcgctcccc 9286354
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cagcggcgcctcgcgctcccc 388 ||||||||||||||||||||| Sbjct: 62928 cagcggcgcctcgcgctcccc 62948
>ref|NM_189865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagcaggcggaggtggcgg 219 |||||||||||||||||||| Sbjct: 178 ggagcaggcggaggtggcgg 159
>ref|XM_600477.2| PREDICTED: Bos taurus similar to Muscle-cadherin precursor (M-cadherin) (Cadherin-15) (Cadherin-14) (LOC522202), mRNA Length = 3264 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ccggtggccccgtccaccagcagc 305 |||||||||||||||||| ||||| Sbjct: 1805 ccggtggccccgtccacctgcagc 1782
>ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomatosis polyposis coli 2 (LOC485084), mRNA Length = 7620 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ccccgtccaccagcagctgg 308 |||||||||||||||||||| Sbjct: 460 ccccgtccaccagcagctgg 441
>emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 in linkage group 13, complete sequence Length = 189908 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aatacagtttggctagatgg 129 |||||||||||||||||||| Sbjct: 93966 aatacagtttggctagatgg 93947
>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide synthesis gene cluster, partial sequence Length = 124311 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 ccagcgtggagcaggcggaggtgg 216 |||||||||||| ||||||||||| Sbjct: 36765 ccagcgtggagccggcggaggtgg 36788
>emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol gene cluster Length = 51855 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagcaggcggaggtggcgg 219 |||||||||||||||||||| Sbjct: 25240 ggagcaggcggaggtggcgg 25221
>emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14, complete sequence Length = 262038 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ctgatttacattttttattt 31 |||||||||||||||||||| Sbjct: 5871 ctgatttacattttttattt 5852
>gb|AC103876.2| Homo sapiens chromosome 15, clone CTD-2282O12, complete sequence Length = 113199 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgatttacattttttattta 32 |||||||||||||||||||| Sbjct: 45849 tgatttacattttttattta 45868
>ref|XM_694557.1| PREDICTED: Danio rerio similar to neurochondrin isoform 1 (LOC571005), partial mRNA Length = 1395 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 acagcgccggcagcaggtac 245 |||||||||||||||||||| Sbjct: 814 acagcgccggcagcaggtac 795
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagcaggcggaggtggcgg 219 |||||||||||||||||||| Sbjct: 25618798 ggagcaggcggaggtggcgg 25618779
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagcaggcggaggtggcgg 219 |||||||||||||||||||| Sbjct: 72771 ggagcaggcggaggtggcgg 72752
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tactactagttgtacccaat 112 |||||||||||||||||||| Sbjct: 150700 tactactagttgtacccaat 150681
>emb|BX005175.8| Zebrafish DNA sequence from clone DKEY-14H17 in linkage group 11, complete sequence Length = 234851 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gatttacattttttatttag 33 |||||||||||||||||||| Sbjct: 21220 gatttacattttttatttag 21201
>gb|BT024052.1| Zea mays clone EL01N0437G11 mRNA sequence Length = 1768 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 gccggcgtacccggggtacgcgcc 331 |||||||||| ||||||||||||| Sbjct: 1229 gccggcgtacgcggggtacgcgcc 1252 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,497,254 Number of Sequences: 3902068 Number of extensions: 3497254 Number of successful extensions: 80224 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79830 Number of HSP's gapped (non-prelim): 383 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
