ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet39a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188159.2| Oryza sativa (japonica cultivar-group), mRNA 113 5e-22
2ref|XM_506285.1| PREDICTED Oryza sativa (japonica cultivar-group... 113 5e-22
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
4dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
5dbj|AK120684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
6dbj|AK104173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
7dbj|AK104124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
8dbj|AK061478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
9dbj|AK060411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
10gb|AY111750.1| Zea mays CL10536_1 mRNA sequence 84 4e-13
11ref|NM_197354.1| Oryza sativa (japonica cultivar-group) unknown ... 68 2e-08
12gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 68 2e-08
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
14dbj|AK103655.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
15dbj|AK059344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
17ref|XM_385813.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 44 0.35
18emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chro... 42 1.4
19emb|AL606962.22| Mouse DNA sequence from clone RP23-29H22 on chr... 42 1.4
20ref|NM_202942.1| Arabidopsis thaliana unknown protein AT4G32900 ... 40 5.4
21ref|NM_119443.1| Arabidopsis thaliana unknown protein AT4G32900 ... 40 5.4
22gb|BC103727.1| Homo sapiens kinesin light chain 4, transcript va... 40 5.4
23ref|XM_518486.1| PREDICTED: Pan troglodytes similar to PTK7 prot... 40 5.4
24gb|BC080637.1| Homo sapiens kinesin light chain 4, transcript va... 40 5.4
25gb|BC012357.1| Homo sapiens kinesin light chain 4, transcript va... 40 5.4
26gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.4
27gb|AC005538.3| Homo sapiens BAC clone RP11-332L11 from 2, comple... 40 5.4
28ref|NM_138343.2| Homo sapiens kinesin light chain 4 (KLC4), tran... 40 5.4
29ref|NM_201523.1| Homo sapiens kinesin light chain 4 (KLC4), tran... 40 5.4
30ref|NM_201522.1| Homo sapiens kinesin light chain 4 (KLC4), tran... 40 5.4
31ref|NM_201521.1| Homo sapiens kinesin light chain 4 (KLC4), tran... 40 5.4
32gb|AC129211.3| Mus musculus BAC clone RP24-348E18 from chromosom... 40 5.4
33gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.4
34emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.4
35emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 40 5.4
36emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, ... 40 5.4
37emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, B... 40 5.4
38emb|BX640717.1|HSM806788 Homo sapiens mRNA; cDNA DKFZp686J01192 ... 40 5.4
39dbj|AK127894.1| Homo sapiens cDNA FLJ46000 fis, clone SMINT20107... 40 5.4
40dbj|AK127018.1| Homo sapiens cDNA FLJ45074 fis, clone BRAWH30274... 40 5.4
41dbj|AK094102.1| Homo sapiens cDNA FLJ36783 fis, clone ADRGL20018... 40 5.4
42dbj|AK056393.1| Homo sapiens cDNA FLJ31831 fis, clone NT2RP60001... 40 5.4
43dbj|AK055293.1| Homo sapiens cDNA FLJ30731 fis, clone FEBRA20001... 40 5.4
44emb|BX829060.1|CNS0A4J2 Arabidopsis thaliana Full-length cDNA Co... 40 5.4
45emb|BX828774.1|CNS0A4J9 Arabidopsis thaliana Full-length cDNA Co... 40 5.4
46gb|AC159031.1| Pan troglodytes BAC clone CH251-381B17 from chrom... 40 5.4
47gb|AY089129.1| Arabidopsis thaliana clone 36835 mRNA, complete s... 40 5.4
48emb|AL806525.23| Mouse DNA sequence from clone RP23-254N4 on chr... 40 5.4
49gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01,... 40 5.4 
>ref|NM_188159.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1080

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 883 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 824

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 823 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 779
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>ref|XM_506285.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.110
           mRNA
          Length = 1092

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 869 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 810

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 809 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 765
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                            
Query: 302      tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
                |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 12984179 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 12984238

                                                             
Query: 362      cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
                |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 12984239 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 12984283
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                         
Query: 302   tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
             |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 58476 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 58535

                                                          
Query: 362   cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
             |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 58536 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 58580
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>dbj|AK120684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164D19, full
           insert sequence
          Length = 1040

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 879 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 820

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 819 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 775
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>dbj|AK104173.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B12, full
           insert sequence
          Length = 966

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 743 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 684

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 683 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 639
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>dbj|AK104124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D05, full
           insert sequence
          Length = 1080

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 883 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 824

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 823 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 779
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>dbj|AK061478.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G06, full
           insert sequence
          Length = 1092

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 869 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 810

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 809 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 765
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>dbj|AK060411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E03, full
           insert sequence
          Length = 954

 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361
           |||||||| || ||||||| |||||| || |||||||||||||  |||||| ||||||||
Sbjct: 749 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 690

                                                        
Query: 362 cacggcccgccggacgtgtaatgtatggcgcgcggcgcggtcccg 406
           |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 689 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccg 645
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>gb|AY111750.1| Zea mays CL10536_1 mRNA sequence
          Length = 666

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                       
Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
           ||||| || ||||||||||||||||||||||||  ||||  |||||||||||||||||||
Sbjct: 382 ctccttgagccagaggtcggcgaactcgcagtccctgtagcgctcgaaccacggcccgcc 441

                             
Query: 373 ggacgtgtaatgtatggc 390
           ||| ||||| || |||||
Sbjct: 442 ggaggtgtagtggatggc 459
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>ref|NM_197354.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0076F20.4), mRNA
          Length = 1255

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
           ||||| ||||||||| |||||||| |||||||   |||||  ||||||||||||||||||
Sbjct: 818 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 759

                             
Query: 373 ggacgtgtaatgtatggc 390
           ||| ||||| || |||||
Sbjct: 758 ggaggtgtagtggatggc 741
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>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                         
Query: 313   ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
             ||||| ||||||||| |||||||| |||||||   |||||  ||||||||||||||||||
Sbjct: 24838 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 24897

                               
Query: 373   ggacgtgtaatgtatggc 390
             ||| ||||| || |||||
Sbjct: 24898 ggaggtgtagtggatggc 24915
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 313      ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
                ||||| ||||||||| |||||||| |||||||   |||||  ||||||||||||||||||
Sbjct: 19396972 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 19397031

                                  
Query: 373      ggacgtgtaatgtatggc 390
                ||| ||||| || |||||
Sbjct: 19397032 ggaggtgtagtggatggc 19397049
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>dbj|AK103655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135F01, full
           insert sequence
          Length = 1110

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
           ||||| ||||||||| |||||||| |||||||   |||||  ||||||||||||||||||
Sbjct: 829 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 770

                             
Query: 373 ggacgtgtaatgtatggc 390
           ||| ||||| || |||||
Sbjct: 769 ggaggtgtagtggatggc 752
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>dbj|AK059344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B09, full
           insert sequence
          Length = 1035

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
           ||||| ||||||||| |||||||| |||||||   |||||  ||||||||||||||||||
Sbjct: 760 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 701

                             
Query: 373 ggacgtgtaatgtatggc 390
           ||| ||||| || |||||
Sbjct: 700 ggaggtgtagtggatggc 683
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 313      ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372
                ||||| ||||||||| |||||||| |||||||   |||||  ||||||||||||||||||
Sbjct: 19408248 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 19408307

                                  
Query: 373      ggacgtgtaatgtatggc 390
                ||| ||||| || |||||
Sbjct: 19408308 ggaggtgtagtggatggc 19408325
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>ref|XM_385813.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05637.1)
           partial mRNA
          Length = 1032

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 236 acagcaactgcagacgatgatg 257
           ||||||||||||||||||||||
Sbjct: 436 acagcaactgcagacgatgatg 457
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>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete
              sequence
          Length = 163063

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 146    aaacaagcaaattaaccaacaaaga 170
              |||||||||||||||| ||||||||
Sbjct: 138494 aaacaagcaaattaactaacaaaga 138470
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>emb|AL606962.22| Mouse DNA sequence from clone RP23-29H22 on chromosome 4, complete
              sequence
          Length = 223854

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 270    cttccacctcgccttctttctcctc 294
              |||||||||| ||||||||||||||
Sbjct: 157067 cttccacctctccttctttctcctc 157091
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>ref|NM_202942.1| Arabidopsis thaliana unknown protein AT4G32900 transcript variant
           AT4G32900.2 mRNA, complete cds
          Length = 840

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 acaagcaaattaaccaacaa 167
           ||||||||||||||||||||
Sbjct: 780 acaagcaaattaaccaacaa 761
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>ref|NM_119443.1| Arabidopsis thaliana unknown protein AT4G32900 transcript variant
           AT4G32900.1 mRNA, complete cds
          Length = 862

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 acaagcaaattaaccaacaa 167
           ||||||||||||||||||||
Sbjct: 788 acaagcaaattaaccaacaa 769
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>gb|BC103727.1| Homo sapiens kinesin light chain 4, transcript variant 1, mRNA
           (cDNA clone MGC:111777 IMAGE:6157949), complete cds
          Length = 2351

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 561 tcgccttctttctcctccga 542
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>ref|XM_518486.1| PREDICTED: Pan troglodytes similar to PTK7 protein tyrosine kinase
           7 isoform a precursor; colon carcinoma kinase-4;
           protein-tyrosine kinase PTK7 (LOC462708), mRNA
          Length = 6377

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 971 tcgccttctttctcctccga 952
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>gb|BC080637.1| Homo sapiens kinesin light chain 4, transcript variant 1, mRNA
           (cDNA clone MGC:99549 IMAGE:6573021), complete cds
          Length = 2361

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 563 tcgccttctttctcctccga 544
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>gb|BC012357.1| Homo sapiens kinesin light chain 4, transcript variant 4, mRNA
           (cDNA clone IMAGE:4654235), complete cds
          Length = 1265

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 564 tcgccttctttctcctccga 545
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    ggcgcgcggcgcggtcccgc 407
              ||||||||||||||||||||
Sbjct: 255119 ggcgcgcggcgcggtcccgc 255138
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>gb|AC005538.3| Homo sapiens BAC clone RP11-332L11 from 2, complete sequence
          Length = 193627

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    caaacaagcaaattaaccaacaaa 168
              ||||||||||||| ||||||||||
Sbjct: 156411 caaacaagcaaataaaccaacaaa 156434
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>ref|NM_138343.2| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 4,
           mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 583 tcgccttctttctcctccga 564
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>ref|NM_201523.1| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 3,
           mRNA
          Length = 2674

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 879 tcgccttctttctcctccga 860
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>ref|NM_201522.1| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 2,
           mRNA
          Length = 2488

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 693 tcgccttctttctcctccga 674
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>ref|NM_201521.1| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 1,
           mRNA
          Length = 2378

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 583 tcgccttctttctcctccga 564
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>gb|AC129211.3| Mus musculus BAC clone RP24-348E18 from chromosome 8, complete sequence
          Length = 167455

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tggatacttggccctcaagg 40
             ||||||||||||||||||||
Sbjct: 80704 tggatacttggccctcaagg 80685
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 314    tcctggatccagaggtcggcgaac 337
              ||||||||||| ||||||||||||
Sbjct: 105804 tcctggatccacaggtcggcgaac 105781
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    ggcgcgcggcgcggtcccgc 407
              ||||||||||||||||||||
Sbjct: 779791 ggcgcgcggcgcggtcccgc 779810
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   gtgccttccacctcgccttc 285
             ||||||||||||||||||||
Sbjct: 29955 gtgccttccacctcgccttc 29974
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>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78
          Length = 198669

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    acaagcaaattaaccaacaa 167
              ||||||||||||||||||||
Sbjct: 100564 acaagcaaattaaccaacaa 100583
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>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA
            project)
          Length = 94482

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  acaagcaaattaaccaacaa 167
            ||||||||||||||||||||
Sbjct: 9868 acaagcaaattaaccaacaa 9887
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>emb|BX640717.1|HSM806788 Homo sapiens mRNA; cDNA DKFZp686J01192 (from clone DKFZp686J01192)
          Length = 2676

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 820 tcgccttctttctcctccga 801
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>dbj|AK127894.1| Homo sapiens cDNA FLJ46000 fis, clone SMINT2010753, highly  similar
           to Probable kinesin light chain 3
          Length = 2373

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 596 tcgccttctttctcctccga 577
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>dbj|AK127018.1| Homo sapiens cDNA FLJ45074 fis, clone BRAWH3027440, highly  similar
            to Probable kinesin light chain 3
          Length = 3604

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  tcgccttctttctcctccga 297
            ||||||||||||||||||||
Sbjct: 1888 tcgccttctttctcctccga 1869
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>dbj|AK094102.1| Homo sapiens cDNA FLJ36783 fis, clone ADRGL2001830, moderately
           similar to KINESIN LIGHT CHAIN
          Length = 2654

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 879 tcgccttctttctcctccga 860
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>dbj|AK056393.1| Homo sapiens cDNA FLJ31831 fis, clone NT2RP6000123, moderately
           similar to KINESIN LIGHT CHAIN
          Length = 2364

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 tcgccttctttctcctccga 297
           ||||||||||||||||||||
Sbjct: 583 tcgccttctttctcctccga 564
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>dbj|AK055293.1| Homo sapiens cDNA FLJ30731 fis, clone FEBRA2000105, moderately
            similar to KINESIN LIGHT CHAIN
          Length = 2770

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  tcgccttctttctcctccga 297
            ||||||||||||||||||||
Sbjct: 1001 tcgccttctttctcctccga 982
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>emb|BX829060.1|CNS0A4J2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL65ZC03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 778

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 acaagcaaattaaccaacaa 167
           ||||||||||||||||||||
Sbjct: 717 acaagcaaattaaccaacaa 698
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>emb|BX828774.1|CNS0A4J9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL37ZF03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 836

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 acaagcaaattaaccaacaa 167
           ||||||||||||||||||||
Sbjct: 774 acaagcaaattaaccaacaa 755
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>gb|AC159031.1| Pan troglodytes BAC clone CH251-381B17 from chromosome unknown,
             complete sequence
          Length = 177940

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   caaacaagcaaattaaccaacaaa 168
             ||||||||||||| ||||||||||
Sbjct: 83548 caaacaagcaaataaaccaacaaa 83525
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>gb|AY089129.1| Arabidopsis thaliana clone 36835 mRNA, complete sequence
          Length = 862

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 acaagcaaattaaccaacaa 167
           ||||||||||||||||||||
Sbjct: 788 acaagcaaattaaccaacaa 769
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>emb|AL806525.23| Mouse DNA sequence from clone RP23-254N4 on chromosome 4, complete
              sequence
          Length = 209356

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    caaacaagcaaattaaccaacaaa 168
              ||||||||||||| ||||||||||
Sbjct: 132360 caaacaagcaaataaaccaacaaa 132337
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>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence
          Length = 53923

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   caaacaagcaaattaaccaa 164
             ||||||||||||||||||||
Sbjct: 29370 caaacaagcaaattaaccaa 29389


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,474,108
Number of Sequences: 3902068
Number of extensions: 2474108
Number of successful extensions: 47230
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46942
Number of HSP's gapped (non-prelim): 288
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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