ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet38g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on ch... 42 0.15
2gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, compl... 42 0.15
3gb|BC052945.1| Homo sapiens cDNA clone IMAGE:5268504 40 0.59
4gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chrom... 40 0.59
5ref|XM_944925.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 0.59
6ref|XM_932161.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 0.59
7gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, comp... 40 0.59
8gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H2... 40 0.59
9gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 2.3
10emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, comple... 38 2.3
11gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Canc... 38 2.3
12ref|NM_077427.3| Caenorhabditis elegans T21B6.2 (T21B6.2) mRNA, ... 38 2.3
13gb|AF465753.1| Oncorhynchus mykiss ABCB2 gene, 5' flanking region 38 2.3
14emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chr... 38 2.3
15gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, com... 36 9.3
16gb|AC149328.2| Phakopsora pachyrhizi clone JGIAFNA-13C16, comple... 36 9.3
17gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 36 9.3
18gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 36 9.3
19gb|AC140428.3| Mus musculus BAC clone RP23-100P8 from chromosome... 36 9.3
20emb|CR932322.1|CNS0KYLJ Paramecium tetraurelia macronuclear, put... 36 9.3
21gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, com... 36 9.3
22gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, comp... 36 9.3
23gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete se... 36 9.3
24emb|AL805961.22| Human DNA sequence from clone RP11-718D19 on ch... 36 9.3
25emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on ch... 36 9.3
26emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chro... 36 9.3
27emb|AL353598.12| Human DNA sequence from clone RP11-470J20 on ch... 36 9.3
28gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, com... 36 9.3
29emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 ... 36 9.3
30emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 i... 36 9.3
31emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, comp... 36 9.3
32emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 i... 36 9.3
33emb|CR759941.1| Rat DNA sequence from clone RP32-551O16 on chrom... 36 9.3
34emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 i... 36 9.3
35emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 i... 36 9.3
36gb|AC155333.5| Mus musculus 6 BAC RP24-475M8 (Roswell Park Cance... 36 9.3
37gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C... 36 9.3
38gb|AC149369.2| Phakopsora pachyrhizi clone JGIAFNA-53G17, comple... 36 9.3
39gb|AC093729.2| Homo sapiens BAC clone RP11-11N6 from 4, complete... 36 9.3
40gb|AC074008.5| Homo sapiens BAC clone RP11-582H21 from 2, comple... 36 9.3
41gb|AC109822.5| Homo sapiens BAC clone RP11-633J12 from 2, comple... 36 9.3
42gb|AC156803.2| Mus musculus BAC clone RP23-6E6 from chromosome 1... 36 9.3
43gb|AC157654.2| Mus musculus BAC clone RP24-286J10 from chromosom... 36 9.3
44gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12... 36 9.3
45gb|AC073081.5| Homo sapiens BAC clone RP11-310H21 from 2, comple... 36 9.3
46gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana... 36 9.3
47dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 36 9.3
48gb|AC149343.2| Phakopsora pachyrhizi clone JGIAFNA-33E11, comple... 36 9.3
49emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in ... 36 9.3
50gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 36 9.3
51gb|AC005578.1|AC005578 Homo sapiens chromosome 19, cosmid F20887... 36 9.3
52emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chro... 36 9.3 
>emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on chromosome 1q31.1-31.3,
              complete sequence
          Length = 169162

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     atgttccatatgggccctcaa 37
              |||||||||||||||||||||
Sbjct: 137529 atgttccatatgggccctcaa 137549
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>gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, complete sequence
          Length = 170063

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     ctcaattgtaaacatctttga 53
              |||||||||||||||||||||
Sbjct: 100293 ctcaattgtaaacatctttga 100273
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>gb|BC052945.1| Homo sapiens cDNA clone IMAGE:5268504
          Length = 3651

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   ccctcaattgtaaacatctt 50
            ||||||||||||||||||||
Sbjct: 3435 ccctcaattgtaaacatctt 3416
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>gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chromosome 5, complete
              sequence
          Length = 169688

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ccctcaattgtaaacatctt 50
              ||||||||||||||||||||
Sbjct: 101948 ccctcaattgtaaacatctt 101929
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>ref|XM_944925.1| PREDICTED: Homo sapiens hypothetical protein LOC649241, transcript
            variant 1 (LOC649242), mRNA
          Length = 3631

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   ccctcaattgtaaacatctt 50
            ||||||||||||||||||||
Sbjct: 3429 ccctcaattgtaaacatctt 3410
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>ref|XM_932161.1| PREDICTED: Homo sapiens hypothetical protein LOC643200, transcript
            variant 1 (LOC643201), mRNA
          Length = 3631

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   ccctcaattgtaaacatctt 50
            ||||||||||||||||||||
Sbjct: 3429 ccctcaattgtaaacatctt 3410
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>gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, complete sequence
          Length = 186722

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ccctcaattgtaaacatctt 50
             ||||||||||||||||||||
Sbjct: 21773 ccctcaattgtaaacatctt 21754
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>gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H24, complete sequence
          Length = 104325

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ccctcaattgtaaacatctt 50
             ||||||||||||||||||||
Sbjct: 78023 ccctcaattgtaaacatctt 78004
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     aattgtaaacatctttgat 54
              |||||||||||||||||||
Sbjct: 138542 aattgtaaacatctttgat 138524
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>emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, complete sequence
          Length = 30716

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    attgtaaacatctttgata 55
             |||||||||||||||||||
Sbjct: 21003 attgtaaacatctttgata 21021
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>gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178336

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    aattgtaaacatctttgat 54
             |||||||||||||||||||
Sbjct: 41589 aattgtaaacatctttgat 41571
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>ref|NM_077427.3| Caenorhabditis elegans T21B6.2 (T21B6.2) mRNA, complete cds
          Length = 1273

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  attgtaaacatctttgata 55
           |||||||||||||||||||
Sbjct: 582 attgtaaacatctttgata 564
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>gb|AF465753.1| Oncorhynchus mykiss ABCB2 gene, 5' flanking region
          Length = 813

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 10  acatttcatgttccatatg 28
           |||||||||||||||||||
Sbjct: 697 acatttcatgttccatatg 715
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>emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chromosome X, complete
              sequence
          Length = 194141

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      gacatttcatgttccatat 27
              |||||||||||||||||||
Sbjct: 177314 gacatttcatgttccatat 177332
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>gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, complete sequence
          Length = 158043

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 29    ggccctcaattgtaaaca 46
             ||||||||||||||||||
Sbjct: 36686 ggccctcaattgtaaaca 36669
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>gb|AC149328.2| Phakopsora pachyrhizi clone JGIAFNA-13C16, complete sequence
          Length = 36270

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     agacatttcatgttccat 25
             ||||||||||||||||||
Sbjct: 32358 agacatttcatgttccat 32341
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 38      ttgtaaacatctttgata 55
               ||||||||||||||||||
Sbjct: 3755356 ttgtaaacatctttgata 3755373
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 38      ttgtaaacatctttgata 55
               ||||||||||||||||||
Sbjct: 3755729 ttgtaaacatctttgata 3755746
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>gb|AC140428.3| Mus musculus BAC clone RP23-100P8 from chromosome 7, complete sequence
          Length = 218370

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 8     agacatttcatgttccatatgg 29
             |||||||||| |||||||||||
Sbjct: 90104 agacatttcaggttccatatgg 90125
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>emb|CR932322.1|CNS0KYLJ Paramecium tetraurelia macronuclear, putative gene for inositol
            1,4,5-triphosphate receptor n, isoform 2, complete gene
          Length = 9060

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 37   attgtaaacatctttgat 54
            ||||||||||||||||||
Sbjct: 4937 attgtaaacatctttgat 4954
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>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence
          Length = 312488

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     atatagacatttcatgtt 21
             ||||||||||||||||||
Sbjct: 57646 atatagacatttcatgtt 57663
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>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence
          Length = 236838

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     atatagacatttcatgtt 21
             ||||||||||||||||||
Sbjct: 87415 atatagacatttcatgtt 87398
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>gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete sequence
          Length = 125368

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 35     caattgtaaacatctttg 52
              ||||||||||||||||||
Sbjct: 111691 caattgtaaacatctttg 111674
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>emb|AL805961.22| Human DNA sequence from clone RP11-718D19 on chromosome 1, complete
             sequence
          Length = 166258

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    acatttcatgttccatat 27
             ||||||||||||||||||
Sbjct: 60372 acatttcatgttccatat 60389
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>emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on chromosome 1 Contains STSs
              and GSSs, complete sequence
          Length = 130715

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     atatgggccctcaattgt 41
              ||||||||||||||||||
Sbjct: 112885 atatgggccctcaattgt 112902
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>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a
             novel gene and part of a novel gene, complete sequence
          Length = 145630

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 6     atagacatttcatgttcc 23
             ||||||||||||||||||
Sbjct: 17182 atagacatttcatgttcc 17199
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>emb|AL353598.12| Human DNA sequence from clone RP11-470J20 on chromosome 9 Contains the
             3' end of the AKAP2 (PALM2) gene for A kinase (PRKA)
             anchor protein 2 (paralemmin 2) and a novel gene, complete
             sequence
          Length = 76468

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 9     gacatttcatgttccata 26
             ||||||||||||||||||
Sbjct: 49361 gacatttcatgttccata 49344
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>gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, complete sequence
          Length = 196977

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    ggccctcaattgtaaaca 46
             ||||||||||||||||||
Sbjct: 16524 ggccctcaattgtaaaca 16541
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>emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 in linkage group 4
              Contains seven novel genes and two CpG islands, complete
              sequence
          Length = 216458

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      catatagacatttcatgt 20
              ||||||||||||||||||
Sbjct: 175724 catatagacatttcatgt 175707
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>emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 in linkage group 4
             Contains the ascl1a gene for achaete-scute complex-like 1a
             (Drosophila), the gene for a novel protein similar to
             vertebrate RecQ protein-like DNA helicase Q1-like (RECQL),
             the gene for a novel protein similar to tyrosine
             hydroxylase (th), the pah gene for phenylalanine
             hydroxylase, the 5' end of the gene for a novel protein
             similar to vertebrate uncharacterized hematopoietic
             stem/progenitor cells protein MDS028 (MDS028) and a CpG
             island, complete sequence
          Length = 166242

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     agacatttcatgttccat 25
             ||||||||||||||||||
Sbjct: 59798 agacatttcatgttccat 59781
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>emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, complete sequence
          Length = 156637

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 37    attgtaaacatctttgat 54
             ||||||||||||||||||
Sbjct: 85024 attgtaaacatctttgat 85007
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>emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 in linkage group 5,
              complete sequence
          Length = 154591

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      catatagacatttcatgt 20
              ||||||||||||||||||
Sbjct: 151802 catatagacatttcatgt 151819
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>emb|CR759941.1| Rat DNA sequence from clone RP32-551O16 on chromosome Y, complete
             sequence
          Length = 174940

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 46    atctttgatagtgtacaa 63
             ||||||||||||||||||
Sbjct: 20990 atctttgatagtgtacaa 20973
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>emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 in linkage group 23,
              complete sequence
          Length = 156938

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      catatagacatttcatgt 20
              ||||||||||||||||||
Sbjct: 119213 catatagacatttcatgt 119230
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>emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 in linkage group 8,
             complete sequence
          Length = 231254

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 37    attgtaaacatctttgat 54
             ||||||||||||||||||
Sbjct: 16748 attgtaaacatctttgat 16731
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>gb|AC155333.5| Mus musculus 6 BAC RP24-475M8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 189462

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 38     ttgtaaacatctttgata 55
              ||||||||||||||||||
Sbjct: 164436 ttgtaaacatctttgata 164453
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>gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C20, complete sequence
          Length = 140935

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 35    caattgtaaacatctttg 52
             ||||||||||||||||||
Sbjct: 61457 caattgtaaacatctttg 61440
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>gb|AC149369.2| Phakopsora pachyrhizi clone JGIAFNA-53G17, complete sequence
          Length = 36690

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     agacatttcatgttccat 25
             ||||||||||||||||||
Sbjct: 13188 agacatttcatgttccat 13205
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>gb|AC093729.2| Homo sapiens BAC clone RP11-11N6 from 4, complete sequence
          Length = 148616

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 13     tttcatgttccatatggg 30
              ||||||||||||||||||
Sbjct: 104981 tttcatgttccatatggg 104964
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>gb|AC074008.5| Homo sapiens BAC clone RP11-582H21 from 2, complete sequence
          Length = 159439

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 15    tcatgttccatatgggcc 32
             ||||||||||||||||||
Sbjct: 50015 tcatgttccatatgggcc 50032
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>gb|AC109822.5| Homo sapiens BAC clone RP11-633J12 from 2, complete sequence
          Length = 194235

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 36   aattgtaaacatctttga 53
            ||||||||||||||||||
Sbjct: 8212 aattgtaaacatctttga 8229
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>gb|AC156803.2| Mus musculus BAC clone RP23-6E6 from chromosome 13, complete sequence
          Length = 226345

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 2     tcatatagacatttcatg 19
             ||||||||||||||||||
Sbjct: 12795 tcatatagacatttcatg 12812
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>gb|AC157654.2| Mus musculus BAC clone RP24-286J10 from chromosome 13, complete sequence
          Length = 152221

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      tcatatagacatttcatg 19
              ||||||||||||||||||
Sbjct: 110782 tcatatagacatttcatg 110799
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>gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12P18 genomic sequence, complete
             sequence
          Length = 79469

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 33    ctcaattgtaaacatctttgat 54
             |||||||||||| |||||||||
Sbjct: 49702 ctcaattgtaaatatctttgat 49723
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>gb|AC073081.5| Homo sapiens BAC clone RP11-310H21 from 2, complete sequence
          Length = 118001

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 36    aattgtaaacatctttga 53
             ||||||||||||||||||
Sbjct: 46378 aattgtaaacatctttga 46395
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>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I,
             complete sequence
          Length = 95769

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    tgtaaacatctttgatag 56
             ||||||||||||||||||
Sbjct: 84278 tgtaaacatctttgatag 84261
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>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1
          Length = 69927

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     atatagacatttcatgtt 21
             ||||||||||||||||||
Sbjct: 41506 atatagacatttcatgtt 41489
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>gb|AC149343.2| Phakopsora pachyrhizi clone JGIAFNA-33E11, complete sequence
          Length = 32102

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 8    agacatttcatgttccat 25
            ||||||||||||||||||
Sbjct: 4704 agacatttcatgttccat 4721
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>emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in linkage group 4,
            complete sequence
          Length = 141185

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 8    agacatttcatgttccat 25
            ||||||||||||||||||
Sbjct: 2154 agacatttcatgttccat 2171
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 38      ttgtaaacatctttgata 55
               ||||||||||||||||||
Sbjct: 3755229 ttgtaaacatctttgata 3755246
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>gb|AC005578.1|AC005578 Homo sapiens chromosome 19, cosmid F20887, complete sequence
          Length = 43297

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 33    ctcaattgtaaacatctt 50
             ||||||||||||||||||
Sbjct: 38462 ctcaattgtaaacatctt 38479
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>emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chromosome 4, complete
             sequence
          Length = 207022

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 11    catttcatgttccatatg 28
             ||||||||||||||||||
Sbjct: 27437 catttcatgttccatatg 27420


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 515,736
Number of Sequences: 3902068
Number of extensions: 515736
Number of successful extensions: 35651
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35532
Number of HSP's gapped (non-prelim): 119
length of query: 63
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 42
effective length of database: 17,151,101,840
effective search space: 720346277280
effective search space used: 720346277280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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